Gene annotation
Transcriptome id Sobic.002G373900.1
Synonym Sb02g039170
Functional annotation lung seven transmembrane domain containing protein, putative, expressed
UniProt A0A1B6QFH4
Pfam PF06814
Panther DB PTHR21229 PTHR21229:SF15
NCBI CDD KOG2568; Predicted membrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G72480 : Lung seven transmembrane receptor family protein
RAP-DB (Rice) LOC_Os07g42310.1 : lung seven transmembrane domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a037386 , Zm00025a037387
Brachypodium KQK15265
Barley HORVU2Hr1G031410.3 , HORVU2Hr1G031410.1 , HORVU2Hr1G031410.7 , HORVU2Hr1G031410.6 , HORVU2Hr1G031410.5 , HORVU2Hr1G031410.4
Wheat TraesCS2A02G169700 , TraesCS2D02G177200 , TraesCS2B02G196000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G233800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Transferase family protein (At)(PubMedID : 27208977)@transferase family protein, putative, expressed -
2 Sobic.004G191901 - K09264: MADS-box transcription factor, plant
3 Sobic.009G074200 - -
4 Sobic.003G249500 expressed protein -
5 Sobic.002G385601 - K01166: ribonuclease T2
6 Sobic.003G352000 growth regulator related protein, putative, expressed -
7 Sobic.001G450900 UNE2, putative, expressed -
8 Sobic.K029400 conserved hypothetical protein -
9 Sobic.006G057100 - -
10 Sobic.002G278100 armadillo/beta-catenin repeat family protein, putative, expressed -
11 Sobic.003G168200 - -
12 Sobic.007G149200 "DEP1/GGC2(Ortholog in rice:Huang et al., 2009(PubMedID : 31659905)@keratin-associated protein 5-4, putative, expressed -
13 Sobic.010G201266 - K05573: NAD(P)H-quinone oxidoreductase subunit 2
K02992: RP-S7, MRPS7, small subunit ribosomal protein S7
14 Sobic.009G135550 - -
15 Sobic.003G172400 conserved hypothetical protein -
16 Sobic.008G160300 NADPH-dependent oxidoreductase, putative K05576: NAD(P)H-quinone oxidoreductase subunit 4L
17 Sobic.003G160400 zinc knuckle family protein, expressed -
18 Sobic.005G167100 - -
19 Sobic.010G107601 - -
20 Sobic.010G225400 expressed protein -


Gene co-expression network
sample Sobic002G373900 Sobic002G373900 Sobic006G233800 Sobic006G233800 Sobic002G373900--Sobic006G233800 Sobic004G191901 Sobic004G191901 Sobic002G373900--Sobic004G191901 Sobic009G074200 Sobic009G074200 Sobic002G373900--Sobic009G074200 Sobic003G249500 Sobic003G249500 Sobic002G373900--Sobic003G249500 Sobic002G385601 Sobic002G385601 Sobic002G373900--Sobic002G385601 Sobic003G352000 Sobic003G352000 Sobic002G373900--Sobic003G352000 Sobic001G450900 Sobic001G450900 Sobic002G373900--Sobic001G450900 SobicK029400 SobicK029400 Sobic002G373900--SobicK029400 Sobic006G057100 Sobic006G057100 Sobic002G373900--Sobic006G057100 Sobic006G233800--Sobic002G373900 Sobic006G233800--Sobic003G249500 Sobic005G013901 Sobic005G013901 Sobic006G233800--Sobic005G013901 Sobic002G025000 Sobic002G025000 Sobic006G233800--Sobic002G025000 Sobic006G233800--Sobic009G074200 Sobic004G234766 Sobic004G234766 Sobic006G233800--Sobic004G234766 Sobic007G201200 Sobic007G201200 Sobic006G233800--Sobic007G201200 Sobic007G149750 Sobic007G149750 Sobic006G233800--Sobic007G149750 Sobic003G169400 Sobic003G169400 Sobic006G233800--Sobic003G169400 Sobic009G016666 Sobic009G016666 Sobic004G191901--Sobic009G016666 Sobic004G191901--Sobic001G450900 Sobic010G035600 Sobic010G035600 Sobic004G191901--Sobic010G035600 Sobic010G185250 Sobic010G185250 Sobic004G191901--Sobic010G185250 Sobic007G065000 Sobic007G065000 Sobic004G191901--Sobic007G065000 Sobic004G337850 Sobic004G337850 Sobic004G191901--Sobic004G337850 Sobic007G145801 Sobic007G145801 Sobic004G191901--Sobic007G145801 Sobic004G191901--Sobic006G057100 Sobic009G101500 Sobic009G101500 Sobic004G191901--Sobic009G101500 Sobic010G139200 Sobic010G139200 Sobic009G074200--Sobic010G139200 Sobic006G183100 Sobic006G183100 Sobic009G074200--Sobic006G183100 Sobic003G369533 Sobic003G369533 Sobic009G074200--Sobic003G369533 Sobic003G172500 Sobic003G172500 Sobic009G074200--Sobic003G172500 Sobic004G087050 Sobic004G087050 Sobic009G074200--Sobic004G087050 Sobic003G168200 Sobic003G168200 Sobic009G074200--Sobic003G168200 Sobic009G074200--Sobic009G016666 SobicK032300 SobicK032300 Sobic009G074200--SobicK032300 Sobic003G168425 Sobic003G168425 Sobic009G074200--Sobic003G168425 Sobic003G249500--Sobic002G373900 Sobic001G029500 Sobic001G029500 Sobic003G249500--Sobic001G029500 Sobic003G249500--Sobic004G191901 Sobic001G128000 Sobic001G128000 Sobic003G249500--Sobic001G128000 Sobic003G249500--Sobic006G233800 Sobic003G160400 Sobic003G160400 Sobic003G249500--Sobic003G160400 Sobic010G267300 Sobic010G267300 Sobic003G249500--Sobic010G267300 Sobic008G033800 Sobic008G033800 Sobic003G249500--Sobic008G033800 Sobic003G119750 Sobic003G119750 Sobic003G249500--Sobic003G119750 Sobic003G160300 Sobic003G160300 Sobic002G385601--Sobic003G160300 Sobic002G390200 Sobic002G390200 Sobic002G385601--Sobic002G390200 Sobic006G130100 Sobic006G130100 Sobic002G385601--Sobic006G130100 Sobic005G096450 Sobic005G096450 Sobic002G385601--Sobic005G096450 Sobic005G116400 Sobic005G116400 Sobic002G385601--Sobic005G116400 Sobic010G225400 Sobic010G225400 Sobic002G385601--Sobic010G225400 Sobic008G140050 Sobic008G140050 Sobic002G385601--Sobic008G140050 Sobic001G011600 Sobic001G011600 Sobic002G385601--Sobic001G011600 Sobic003G160433 Sobic003G160433 Sobic002G385601--Sobic003G160433 Sobic003G352000--SobicK029400 Sobic003G352000--Sobic003G168200 Sobic007G149200 Sobic007G149200 Sobic003G352000--Sobic007G149200 Sobic002G278100 Sobic002G278100 Sobic003G352000--Sobic002G278100 Sobic010G201266 Sobic010G201266 Sobic003G352000--Sobic010G201266 Sobic003G352000--Sobic006G057100 Sobic003G172400 Sobic003G172400 Sobic003G352000--Sobic003G172400 Sobic003G352000--Sobic003G369533 Sobic003G218950 Sobic003G218950 Sobic003G352000--Sobic003G218950 Sobic004G019550 Sobic004G019550 Sobic001G450900--Sobic004G019550 Sobic001G154000 Sobic001G154000 Sobic001G450900--Sobic001G154000 Sobic001G450900--Sobic010G035600 Sobic003G286450 Sobic003G286450 Sobic001G450900--Sobic003G286450 Sobic001G476800 Sobic001G476800 Sobic001G450900--Sobic001G476800 Sobic001G535850 Sobic001G535850 Sobic001G450900--Sobic001G535850 Sobic001G450900--Sobic007G065000 Sobic005G139750 Sobic005G139750 Sobic001G450900--Sobic005G139750 Sobic008G171200 Sobic008G171200 Sobic001G450900--Sobic008G171200 SobicK029400--Sobic003G352000 SobicK029400--Sobic003G168200 SobicK029400--Sobic002G278100 SobicK029400--Sobic003G369533 SobicK029400--Sobic010G201266 SobicK029400--Sobic007G149200 SobicK029400--Sobic003G172400 SobicK029400--Sobic005G116400 Sobic008G160300 Sobic008G160300 SobicK029400--Sobic008G160300 Sobic006G057100--Sobic003G218950 Sobic006G057100--Sobic003G352000 Sobic007G085900 Sobic007G085900 Sobic006G057100--Sobic007G085900 Sobic006G057100--SobicK029400 Sobic006G131700 Sobic006G131700 Sobic006G057100--Sobic006G131700 Sobic003G113100 Sobic003G113100 Sobic006G057100--Sobic003G113100 Sobic006G057100--Sobic003G369533 Sobic006G057100--Sobic003G160400 Sobic006G057100--Sobic010G185250
Octagon: transcription factors


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