Gene annotation
Transcriptome id Sobic.003G249500.1
Synonym Sb03g030580
Functional annotation expressed protein
UniProt C5XFZ8
Pfam PF03188
Panther DB PTHR23130 PTHR23130:SF104
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G18260 : Cytochrome b561/ferric reductase transmembrane protein family
RAP-DB (Rice) LOC_Os01g47635.1 : expressed protein
MaizeGDB (Corn) Zm00025a028130
Brachypodium -
Barley HORVU3Hr1G060720.2 , HORVU3Hr1G060720.3 , HORVU3Hr1G060720.1 , HORVU3Hr1G060720.6 , HORVU3Hr1G060720.7 , HORVU3Hr1G060720.4 , HORVU3Hr1G060720.5
Wheat TraesCS3A02G243300 , TraesCS3B02G271400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G373900 lung seven transmembrane domain containing protein, putative, expressed -
2 Sobic.001G029500 GDP-mannose transporter, putative, expressed K15356: VRG4, GDP-mannose transporter
3 Sobic.004G191901 - K09264: MADS-box transcription factor, plant
4 Sobic.001G128000 expressed protein -
5 Sobic.006G233800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Transferase family protein (At)(PubMedID : 27208977)@transferase family protein, putative, expressed -
6 Sobic.003G160400 zinc knuckle family protein, expressed -
7 Sobic.010G267300 thaumatin, putative, expressed -
8 Sobic.008G033800 ABCG protein(PubMedID : 21265893)@pleiotropic drug resistance protein 15, putative, expressed -
9 Sobic.003G119750 - -
10 Sobic.005G167100 - -
11 Sobic.007G085900 - -
12 Sobic.010G107601 - -
13 Sobic.003G337200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat-containing protein, putative, expressed -
14 Sobic.001G293900 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
15 Sobic.004G234766 - -
16 Sobic.003G172400 conserved hypothetical protein -
17 Sobic.004G104200 berberine and berberine like domain containing protein, expressed -
18 Sobic.003G055400 expressed protein -
19 Sobic.003G160300 - -
20 Sobic.K029400 conserved hypothetical protein -


Gene co-expression network
sample Sobic003G249500 Sobic003G249500 Sobic002G373900 Sobic002G373900 Sobic003G249500--Sobic002G373900 Sobic001G029500 Sobic001G029500 Sobic003G249500--Sobic001G029500 Sobic004G191901 Sobic004G191901 Sobic003G249500--Sobic004G191901 Sobic001G128000 Sobic001G128000 Sobic003G249500--Sobic001G128000 Sobic006G233800 Sobic006G233800 Sobic003G249500--Sobic006G233800 Sobic003G160400 Sobic003G160400 Sobic003G249500--Sobic003G160400 Sobic010G267300 Sobic010G267300 Sobic003G249500--Sobic010G267300 Sobic008G033800 Sobic008G033800 Sobic003G249500--Sobic008G033800 Sobic003G119750 Sobic003G119750 Sobic003G249500--Sobic003G119750 Sobic002G373900--Sobic006G233800 Sobic002G373900--Sobic004G191901 Sobic009G074200 Sobic009G074200 Sobic002G373900--Sobic009G074200 Sobic002G373900--Sobic003G249500 Sobic002G385601 Sobic002G385601 Sobic002G373900--Sobic002G385601 Sobic003G352000 Sobic003G352000 Sobic002G373900--Sobic003G352000 Sobic001G450900 Sobic001G450900 Sobic002G373900--Sobic001G450900 SobicK029400 SobicK029400 Sobic002G373900--SobicK029400 Sobic006G057100 Sobic006G057100 Sobic002G373900--Sobic006G057100 Sobic004G282933 Sobic004G282933 Sobic001G029500--Sobic004G282933 Sobic001G054050 Sobic001G054050 Sobic001G029500--Sobic001G054050 Sobic007G085900 Sobic007G085900 Sobic001G029500--Sobic007G085900 Sobic003G160300 Sobic003G160300 Sobic001G029500--Sobic003G160300 Sobic003G160433 Sobic003G160433 Sobic001G029500--Sobic003G160433 Sobic003G050100 Sobic003G050100 Sobic001G029500--Sobic003G050100 Sobic002G390200 Sobic002G390200 Sobic001G029500--Sobic002G390200 Sobic001G029500--Sobic001G128000 Sobic009G192200 Sobic009G192200 Sobic001G029500--Sobic009G192200 Sobic009G016666 Sobic009G016666 Sobic004G191901--Sobic009G016666 Sobic004G191901--Sobic001G450900 Sobic010G035600 Sobic010G035600 Sobic004G191901--Sobic010G035600 Sobic010G185250 Sobic010G185250 Sobic004G191901--Sobic010G185250 Sobic007G065000 Sobic007G065000 Sobic004G191901--Sobic007G065000 Sobic004G337850 Sobic004G337850 Sobic004G191901--Sobic004G337850 Sobic007G145801 Sobic007G145801 Sobic004G191901--Sobic007G145801 Sobic004G191901--Sobic006G057100 Sobic009G101500 Sobic009G101500 Sobic004G191901--Sobic009G101500 Sobic001G128000--Sobic003G160433 Sobic001G128000--Sobic007G085900 Sobic001G128000--Sobic003G160300 Sobic001G128000--Sobic003G160400 Sobic005G216900 Sobic005G216900 Sobic001G128000--Sobic005G216900 Sobic001G128000--Sobic001G054050 Sobic001G128000--Sobic002G390200 Sobic001G128000--Sobic010G267300 Sobic008G140050 Sobic008G140050 Sobic001G128000--Sobic008G140050 Sobic006G233800--Sobic002G373900 Sobic006G233800--Sobic003G249500 Sobic005G013901 Sobic005G013901 Sobic006G233800--Sobic005G013901 Sobic002G025000 Sobic002G025000 Sobic006G233800--Sobic002G025000 Sobic006G233800--Sobic009G074200 Sobic004G234766 Sobic004G234766 Sobic006G233800--Sobic004G234766 Sobic007G201200 Sobic007G201200 Sobic006G233800--Sobic007G201200 Sobic007G149750 Sobic007G149750 Sobic006G233800--Sobic007G149750 Sobic003G169400 Sobic003G169400 Sobic006G233800--Sobic003G169400 Sobic003G160400--Sobic007G085900 Sobic003G160400--Sobic005G216900 Sobic003G160400--Sobic003G160300 Sobic003G160400--Sobic003G160433 Sobic003G160400--Sobic001G128000 Sobic003G160400--Sobic001G054050 Sobic003G160400--Sobic002G390200 Sobic003G160400--Sobic008G140050 Sobic003G160400--Sobic006G057100 Sobic010G267300--Sobic003G160433 Sobic010G267300--Sobic001G128000 Sobic008G171200 Sobic008G171200 Sobic010G267300--Sobic008G171200 Sobic010G267300--Sobic005G216900 Sobic010G267300--Sobic007G065000 Sobic004G157050 Sobic004G157050 Sobic010G267300--Sobic004G157050 Sobic010G267300--Sobic003G160300 Sobic010G267300--Sobic007G085900 Sobic001G182900 Sobic001G182900 Sobic010G267300--Sobic001G182900 Sobic007G138600 Sobic007G138600 Sobic008G033800--Sobic007G138600 Sobic006G135701 Sobic006G135701 Sobic008G033800--Sobic006G135701 Sobic002G220400 Sobic002G220400 Sobic008G033800--Sobic002G220400 Sobic008G033800--Sobic001G450900 Sobic008G033800--Sobic004G191901 Sobic001G118050 Sobic001G118050 Sobic008G033800--Sobic001G118050 Sobic006G206600 Sobic006G206600 Sobic008G033800--Sobic006G206600 Sobic004G019550 Sobic004G019550 Sobic008G033800--Sobic004G019550 Sobic009G218700 Sobic009G218700 Sobic008G033800--Sobic009G218700 Sobic001G293900 Sobic001G293900 Sobic003G119750--Sobic001G293900 Sobic003G344300 Sobic003G344300 Sobic003G119750--Sobic003G344300 Sobic007G004750 Sobic007G004750 Sobic003G119750--Sobic007G004750 Sobic010G132200 Sobic010G132200 Sobic003G119750--Sobic010G132200 Sobic003G168800 Sobic003G168800 Sobic003G119750--Sobic003G168800 Sobic003G423400 Sobic003G423400 Sobic003G119750--Sobic003G423400 Sobic006G192600 Sobic006G192600 Sobic003G119750--Sobic006G192600 Sobic003G119750--Sobic001G128000 Sobic003G119750--Sobic003G169400
Octagon: transcription factors


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