Gene annotation
Transcriptome id Sobic.003G119750.1
Synonym -
Functional annotation -
UniProt A0A1W0VX08
Pfam -
Panther DB PTHR31973 PTHR31973:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g25310.1 : hypothetical protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G293900 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
2 Sobic.003G344300 - -
3 Sobic.007G004750 - -
4 Sobic.010G132200 inhibitor I family protein, putative, expressed -
5 Sobic.003G168800 photosystem II reaction center protein H, putative, expressed K02709: photosystem II PsbH protein
6 Sobic.003G423400 OsFBX191 - F-box domain containing protein, expressed -
7 Sobic.006G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat protein PPR868-14, putative, expressed -
8 Sobic.001G128000 expressed protein -
9 Sobic.003G169400 DNA-directed RNA polymerase subunit beta, putative, expressed K03046: DNA-directed RNA polymerase subunit beta'
10 Sobic.005G167100 - -
11 Sobic.010G107601 - -
12 Sobic.003G160400 zinc knuckle family protein, expressed -
13 Sobic.008G157700 BURP domain containing protein, expressed -
14 Sobic.001G054050 - -
15 Sobic.003G172400 conserved hypothetical protein -
16 Sobic.003G172850 - K03043: DNA-directed RNA polymerase subunit beta
17 Sobic.003G255850 - -
18 Sobic.003G337200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat-containing protein, putative, expressed -
19 Sobic.010G185250 - -
20 Sobic.003G168500 chloroplast 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20


Gene co-expression network
sample Sobic003G119750 Sobic003G119750 Sobic001G293900 Sobic001G293900 Sobic003G119750--Sobic001G293900 Sobic003G344300 Sobic003G344300 Sobic003G119750--Sobic003G344300 Sobic007G004750 Sobic007G004750 Sobic003G119750--Sobic007G004750 Sobic010G132200 Sobic010G132200 Sobic003G119750--Sobic010G132200 Sobic003G168800 Sobic003G168800 Sobic003G119750--Sobic003G168800 Sobic003G423400 Sobic003G423400 Sobic003G119750--Sobic003G423400 Sobic006G192600 Sobic006G192600 Sobic003G119750--Sobic006G192600 Sobic001G128000 Sobic001G128000 Sobic003G119750--Sobic001G128000 Sobic003G169400 Sobic003G169400 Sobic003G119750--Sobic003G169400 Sobic001G293900--Sobic003G119750 Sobic001G293900--Sobic010G132200 Sobic001G293900--Sobic003G169400 Sobic001G293900--Sobic003G168800 Sobic003G172850 Sobic003G172850 Sobic001G293900--Sobic003G172850 Sobic001G293900--Sobic003G423400 Sobic006G124850 Sobic006G124850 Sobic001G293900--Sobic006G124850 Sobic001G293900--Sobic006G192600 Sobic003G168500 Sobic003G168500 Sobic001G293900--Sobic003G168500 Sobic003G344300--Sobic003G168800 Sobic002G165200 Sobic002G165200 Sobic003G344300--Sobic002G165200 Sobic004G019550 Sobic004G019550 Sobic003G344300--Sobic004G019550 Sobic010G035600 Sobic010G035600 Sobic003G344300--Sobic010G035600 Sobic003G344300--Sobic003G119750 Sobic001G154000 Sobic001G154000 Sobic003G344300--Sobic001G154000 Sobic010G185250 Sobic010G185250 Sobic003G344300--Sobic010G185250 Sobic003G344300--Sobic001G293900 Sobic003G344300--Sobic006G192600 Sobic007G004750--Sobic001G293900 Sobic007G004750--Sobic003G119750 Sobic007G004750--Sobic010G132200 Sobic007G004750--Sobic003G168800 Sobic003G354166 Sobic003G354166 Sobic007G004750--Sobic003G354166 Sobic007G004750--Sobic003G344300 Sobic008G157700 Sobic008G157700 Sobic007G004750--Sobic008G157700 Sobic007G004750--Sobic003G423400 Sobic007G004750--Sobic003G169400 Sobic010G132200--Sobic001G293900 Sobic010G132200--Sobic003G169400 Sobic010G107601 Sobic010G107601 Sobic010G132200--Sobic010G107601 Sobic010G132200--Sobic003G168500 Sobic010G132200--Sobic003G172850 Sobic010G132200--Sobic003G423400 Sobic010G132200--Sobic003G168800 Sobic003G171900 Sobic003G171900 Sobic010G132200--Sobic003G171900 Sobic003G172400 Sobic003G172400 Sobic010G132200--Sobic003G172400 Sobic003G168800--Sobic003G172850 Sobic010G052866 Sobic010G052866 Sobic003G168800--Sobic010G052866 Sobic003G168800--Sobic003G344300 Sobic003G168800--Sobic006G192600 Sobic003G168800--Sobic001G293900 Sobic003G168800--Sobic010G132200 Sobic004G251400 Sobic004G251400 Sobic003G168800--Sobic004G251400 Sobic003G173266 Sobic003G173266 Sobic003G168800--Sobic003G173266 Sobic003G168800--Sobic003G168500 Sobic003G423400--Sobic010G132200 Sobic003G423400--Sobic001G293900 Sobic003G423400--Sobic003G169400 Sobic003G423400--Sobic006G192600 Sobic003G423400--Sobic010G107601 Sobic003G423400--Sobic003G168500 Sobic003G423400--Sobic003G172850 Sobic005G167100 Sobic005G167100 Sobic003G423400--Sobic005G167100 Sobic003G423400--Sobic003G168800 Sobic004G337600 Sobic004G337600 Sobic006G192600--Sobic004G337600 Sobic006G192600--Sobic003G168500 Sobic006G192600--Sobic003G172850 Sobic006G192600--Sobic003G168800 Sobic002G044500 Sobic002G044500 Sobic006G192600--Sobic002G044500 Sobic006G192600--Sobic004G251400 Sobic006G192600--Sobic003G172400 Sobic006G192600--Sobic002G165200 Sobic008G160300 Sobic008G160300 Sobic006G192600--Sobic008G160300 Sobic003G160433 Sobic003G160433 Sobic001G128000--Sobic003G160433 Sobic007G085900 Sobic007G085900 Sobic001G128000--Sobic007G085900 Sobic003G160300 Sobic003G160300 Sobic001G128000--Sobic003G160300 Sobic003G160400 Sobic003G160400 Sobic001G128000--Sobic003G160400 Sobic005G216900 Sobic005G216900 Sobic001G128000--Sobic005G216900 Sobic001G054050 Sobic001G054050 Sobic001G128000--Sobic001G054050 Sobic002G390200 Sobic002G390200 Sobic001G128000--Sobic002G390200 Sobic010G267300 Sobic010G267300 Sobic001G128000--Sobic010G267300 Sobic008G140050 Sobic008G140050 Sobic001G128000--Sobic008G140050 Sobic003G169400--Sobic003G168500 Sobic003G169400--Sobic002G044500 Sobic003G169400--Sobic010G107601 Sobic003G169400--Sobic006G124850 Sobic007G201200 Sobic007G201200 Sobic003G169400--Sobic007G201200 Sobic005G096500 Sobic005G096500 Sobic003G169400--Sobic005G096500 Sobic003G169400--Sobic003G172400 Sobic003G169400--Sobic005G167100 Sobic002G149966 Sobic002G149966 Sobic003G169400--Sobic002G149966
Octagon: transcription factors


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