Gene annotation
Transcriptome id Sobic.001G423600.1
Synonym Sb01g039830
Functional annotation avr9/Cf-9 rapidly elicited protein, putative, expressed
UniProt C5WQ21
Pfam PF05003 PF11961
Panther DB PTHR31371:SF6 PTHR31371
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G23160 : Protein of unknown function (DUF668)
RAP-DB (Rice) LOC_Os03g16390.1 : avr9/Cf-9 rapidly elicited protein, putative, expressed
MaizeGDB (Corn) Zm00025a052772
Brachypodium -
Barley HORVU4Hr1G060260.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G393500 exo70 exocyst complex subunit domain containing protein, expressed -
2 Sobic.004G138400 WRKY51, expressed -
3 Sobic.003G393400 exo70 exocyst complex subunit domain containing protein, expressed -
4 Sobic.009G161700 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@COX VIIa, putative, expressed -
5 Sobic.001G476100 expressed protein -
6 Sobic.001G321700 dehydration response related protein, putative, expressed -
7 Sobic.004G338200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsWAK24 - OsWAK receptor-like protein kinase, expressed -
8 Sobic.007G181900 expressed protein -
9 Sobic.001G330925 - -
10 Sobic.001G406300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
11 Sobic.001G501100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy-metal-associated domain-containing protein, putative, expressed -
12 Sobic.004G106200 receptor-like kinase, putative, expressed -
13 Sobic.004G176950 - -
14 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
15 Sobic.003G314200 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.001G074800 lectin-like receptor kinase, putative, expressed -
17 Sobic.001G237100 lectin-like receptor kinase, putative, expressed -
18 Sobic.001G148000 a WRKY transcription factor which regulates cell wall biosynthesis genes. Seed shattering-related gene.(PubMedID : 24019506)@WRKY60, expressed -
19 Sobic.008G040800 OsFBX396 - F-box domain containing protein, expressed -
20 Sobic.002G041900 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G423600 Sobic001G423600 Sobic003G393500 Sobic003G393500 Sobic001G423600--Sobic003G393500 Sobic004G138400 Sobic004G138400 Sobic001G423600--Sobic004G138400 Sobic003G393400 Sobic003G393400 Sobic001G423600--Sobic003G393400 Sobic009G161700 Sobic009G161700 Sobic001G423600--Sobic009G161700 Sobic001G476100 Sobic001G476100 Sobic001G423600--Sobic001G476100 Sobic001G321700 Sobic001G321700 Sobic001G423600--Sobic001G321700 Sobic004G338200 Sobic004G338200 Sobic001G423600--Sobic004G338200 Sobic007G181900 Sobic007G181900 Sobic001G423600--Sobic007G181900 Sobic001G330925 Sobic001G330925 Sobic001G423600--Sobic001G330925 Sobic003G393500--Sobic001G423600 Sobic003G393500--Sobic003G393400 Sobic001G421250 Sobic001G421250 Sobic003G393500--Sobic001G421250 Sobic004G106200 Sobic004G106200 Sobic003G393500--Sobic004G106200 Sobic003G393500--Sobic001G476100 Sobic001G260550 Sobic001G260550 Sobic003G393500--Sobic001G260550 Sobic003G393500--Sobic004G138400 Sobic003G231400 Sobic003G231400 Sobic003G393500--Sobic003G231400 Sobic002G253300 Sobic002G253300 Sobic003G393500--Sobic002G253300 Sobic003G325100 Sobic003G325100 Sobic004G138400--Sobic003G325100 Sobic009G111800 Sobic009G111800 Sobic004G138400--Sobic009G111800 Sobic004G138400--Sobic001G330925 Sobic002G202800 Sobic002G202800 Sobic004G138400--Sobic002G202800 Sobic004G138400--Sobic004G106200 Sobic004G109100 Sobic004G109100 Sobic004G138400--Sobic004G109100 Sobic003G242800 Sobic003G242800 Sobic004G138400--Sobic003G242800 Sobic004G138400--Sobic001G321700 Sobic004G138400--Sobic001G476100 Sobic003G393400--Sobic007G181900 Sobic010G163200 Sobic010G163200 Sobic003G393400--Sobic010G163200 Sobic009G184300 Sobic009G184300 Sobic003G393400--Sobic009G184300 Sobic003G393400--Sobic001G423600 Sobic003G272200 Sobic003G272200 Sobic003G393400--Sobic003G272200 Sobic001G192400 Sobic001G192400 Sobic003G393400--Sobic001G192400 Sobic005G126900 Sobic005G126900 Sobic003G393400--Sobic005G126900 Sobic004G208000 Sobic004G208000 Sobic003G393400--Sobic004G208000 Sobic002G405000 Sobic002G405000 Sobic003G393400--Sobic002G405000 Sobic001G020200 Sobic001G020200 Sobic009G161700--Sobic001G020200 Sobic009G161700--Sobic004G338200 Sobic009G182500 Sobic009G182500 Sobic009G161700--Sobic009G182500 Sobic003G314200 Sobic003G314200 Sobic009G161700--Sobic003G314200 Sobic003G354050 Sobic003G354050 Sobic009G161700--Sobic003G354050 Sobic004G176950 Sobic004G176950 Sobic009G161700--Sobic004G176950 Sobic003G365500 Sobic003G365500 Sobic009G161700--Sobic003G365500 Sobic001G234733 Sobic001G234733 Sobic009G161700--Sobic001G234733 Sobic009G161700--Sobic001G423600 Sobic001G476100--Sobic001G321700 Sobic001G476100--Sobic004G106200 Sobic001G476100--Sobic004G138400 Sobic001G476100--Sobic009G111800 Sobic010G065001 Sobic010G065001 Sobic001G476100--Sobic010G065001 Sobic008G081500 Sobic008G081500 Sobic001G476100--Sobic008G081500 Sobic001G319000 Sobic001G319000 Sobic001G476100--Sobic001G319000 Sobic003G403600 Sobic003G403600 Sobic001G476100--Sobic003G403600 Sobic005G097500 Sobic005G097500 Sobic001G476100--Sobic005G097500 Sobic001G321700--Sobic004G106200 Sobic001G321700--Sobic009G111800 Sobic001G321700--Sobic001G476100 Sobic001G321700--Sobic010G065001 Sobic001G321700--Sobic004G109100 Sobic001G321700--Sobic001G319000 Sobic001G321700--Sobic008G081500 Sobic009G074200 Sobic009G074200 Sobic001G321700--Sobic009G074200 Sobic004G242900 Sobic004G242900 Sobic001G321700--Sobic004G242900 Sobic004G338200--Sobic001G020200 Sobic004G243000 Sobic004G243000 Sobic004G338200--Sobic004G243000 Sobic004G338200--Sobic003G314200 Sobic007G227500 Sobic007G227500 Sobic004G338200--Sobic007G227500 Sobic008G040800 Sobic008G040800 Sobic004G338200--Sobic008G040800 Sobic004G338200--Sobic009G182500 Sobic003G268800 Sobic003G268800 Sobic004G338200--Sobic003G268800 Sobic004G338200--Sobic009G161700 Sobic006G094800 Sobic006G094800 Sobic004G338200--Sobic006G094800 Sobic007G181900--Sobic003G272200 Sobic002G248600 Sobic002G248600 Sobic007G181900--Sobic002G248600 Sobic007G181900--Sobic003G393400 Sobic002G041900 Sobic002G041900 Sobic007G181900--Sobic002G041900 Sobic001G299900 Sobic001G299900 Sobic007G181900--Sobic001G299900 Sobic001G032400 Sobic001G032400 Sobic007G181900--Sobic001G032400 Sobic007G181900--Sobic001G423600 Sobic004G303500 Sobic004G303500 Sobic007G181900--Sobic004G303500 Sobic007G181900--Sobic001G476100 Sobic001G330925--Sobic004G138400 Sobic001G330925--Sobic002G202800 Sobic009G115500 Sobic009G115500 Sobic001G330925--Sobic009G115500 Sobic002G214500 Sobic002G214500 Sobic001G330925--Sobic002G214500 Sobic003G401500 Sobic003G401500 Sobic001G330925--Sobic003G401500 Sobic001G330925--Sobic003G242800 Sobic001G330925--Sobic003G325100 Sobic003G258700 Sobic003G258700 Sobic001G330925--Sobic003G258700 Sobic002G354400 Sobic002G354400 Sobic001G330925--Sobic002G354400
Octagon: transcription factors


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