Gene annotation
Transcriptome id Sobic.003G314200.2,Sobic.003G314200.1,Sobic.003G314200.3
Synonym CRK34, Sb03g036190
Functional annotation TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt A0A1W0VZV2 , C5XLM7 , A0A1W0VZT7
Pfam PF01657 PF00069 PF01657 PF07714
Panther DB PTHR27002 PTHR27002:SF19
NCBI CDD KOG1187; Serine/threonine protein kinase KOG0598Ribosomal protein S6 kinase and related proteins
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G05200 : cysteine-rich RLK (RECEPTOR-like protein kinase) 25,cysteine-rich RLK (RECEPTOR-like protein kinase) 12
RAP-DB (Rice) LOC_Os07g35580.1,LOC_Os07g35300.1,LOC_Os04g12080.1 : TKL_IRAK_DUF26-lc.11 - DUF26 kinases have homology to DUF26 containing loci, expressed,TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed,TKL_IRAK_DUF26-lc.20 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a039905
Brachypodium PNT72963 , KQK10022
Barley HORVU5Hr1G111240.4 , HORVU5Hr1G111240.5 , HORVU5Hr1G111240.6 , HORVU5Hr1G111240.7 , HORVU5Hr1G111240.2 , HORVU5Hr1G111240.3 , HORVU5Hr1G111240.8 , HORVU5Hr1G111240.9
Wheat TraesCS5A02G465700 , TraesCS5D02G478700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G040800 OsFBX396 - F-box domain containing protein, expressed -
2 Sobic.006G205800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
3 Sobic.006G094800 - -
4 Sobic.001G148000 a WRKY transcription factor which regulates cell wall biosynthesis genes. Seed shattering-related gene.(PubMedID : 24019506)@WRKY60, expressed -
5 Sobic.003G226600 WRKY12, expressed -
6 Sobic.009G027200 tetraspanin family protein, putative, expressed -
7 Sobic.001G207301 - -
8 Sobic.001G501701 - -
9 Sobic.004G338200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsWAK24 - OsWAK receptor-like protein kinase, expressed -
10 Sobic.003G039800 expressed protein -
11 Sobic.004G176950 - -
12 Sobic.003G337400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
13 Sobic.003G348900 disease resistance-responsive family protein, putative, expressed -
14 Sobic.004G169401 - -
15 Sobic.001G097800 - -
16 Sobic.002G245700 slowmo homolog, putative, expressed -
17 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
18 Sobic.006G112000 expressed protein -
19 Sobic.010G186900 - -
20 Sobic.003G120900 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic003G314200 Sobic003G314200 Sobic008G040800 Sobic008G040800 Sobic003G314200--Sobic008G040800 Sobic006G205800 Sobic006G205800 Sobic003G314200--Sobic006G205800 Sobic006G094800 Sobic006G094800 Sobic003G314200--Sobic006G094800 Sobic001G148000 Sobic001G148000 Sobic003G314200--Sobic001G148000 Sobic003G226600 Sobic003G226600 Sobic003G314200--Sobic003G226600 Sobic009G027200 Sobic009G027200 Sobic003G314200--Sobic009G027200 Sobic001G207301 Sobic001G207301 Sobic003G314200--Sobic001G207301 Sobic001G501701 Sobic001G501701 Sobic003G314200--Sobic001G501701 Sobic004G338200 Sobic004G338200 Sobic003G314200--Sobic004G338200 Sobic008G040800--Sobic003G314200 Sobic008G040800--Sobic009G027200 Sobic001G097800 Sobic001G097800 Sobic008G040800--Sobic001G097800 Sobic003G396050 Sobic003G396050 Sobic008G040800--Sobic003G396050 Sobic009G229500 Sobic009G229500 Sobic008G040800--Sobic009G229500 Sobic003G039800 Sobic003G039800 Sobic008G040800--Sobic003G039800 Sobic003G395800 Sobic003G395800 Sobic008G040800--Sobic003G395800 Sobic002G153600 Sobic002G153600 Sobic008G040800--Sobic002G153600 Sobic007G127200 Sobic007G127200 Sobic008G040800--Sobic007G127200 Sobic006G205800--Sobic001G207301 Sobic006G112000 Sobic006G112000 Sobic006G205800--Sobic006G112000 Sobic006G205800--Sobic003G314200 Sobic003G348900 Sobic003G348900 Sobic006G205800--Sobic003G348900 Sobic006G205800--Sobic001G097800 Sobic006G205800--Sobic006G094800 Sobic006G205800--Sobic008G040800 Sobic007G159300 Sobic007G159300 Sobic006G205800--Sobic007G159300 Sobic002G215866 Sobic002G215866 Sobic006G205800--Sobic002G215866 Sobic006G206600 Sobic006G206600 Sobic006G094800--Sobic006G206600 Sobic006G094800--Sobic001G207301 Sobic009G218700 Sobic009G218700 Sobic006G094800--Sobic009G218700 Sobic006G094800--Sobic003G314200 Sobic006G094800--Sobic003G226600 Sobic001G450900 Sobic001G450900 Sobic006G094800--Sobic001G450900 Sobic006G100150 Sobic006G100150 Sobic006G094800--Sobic006G100150 Sobic010G186900 Sobic010G186900 Sobic006G094800--Sobic010G186900 Sobic006G094800--Sobic001G148000 Sobic002G413100 Sobic002G413100 Sobic001G148000--Sobic002G413100 Sobic004G176950 Sobic004G176950 Sobic001G148000--Sobic004G176950 Sobic002G245700 Sobic002G245700 Sobic001G148000--Sobic002G245700 Sobic001G148000--Sobic001G450900 Sobic005G093901 Sobic005G093901 Sobic001G148000--Sobic005G093901 Sobic010G268500 Sobic010G268500 Sobic001G148000--Sobic010G268500 Sobic001G022700 Sobic001G022700 Sobic001G148000--Sobic001G022700 Sobic002G423901 Sobic002G423901 Sobic001G148000--Sobic002G423901 Sobic002G220400 Sobic002G220400 Sobic001G148000--Sobic002G220400 Sobic003G226600--Sobic001G450900 Sobic005G021400 Sobic005G021400 Sobic003G226600--Sobic005G021400 Sobic003G226600--Sobic001G207301 Sobic005G104900 Sobic005G104900 Sobic003G226600--Sobic005G104900 Sobic006G217400 Sobic006G217400 Sobic003G226600--Sobic006G217400 Sobic001G535850 Sobic001G535850 Sobic003G226600--Sobic001G535850 Sobic002G401533 Sobic002G401533 Sobic003G226600--Sobic002G401533 Sobic003G226600--Sobic009G027200 Sobic003G161900 Sobic003G161900 Sobic003G226600--Sobic003G161900 Sobic009G027200--Sobic006G217400 Sobic007G200700 Sobic007G200700 Sobic009G027200--Sobic007G200700 Sobic009G027200--Sobic003G226600 Sobic008G093300 Sobic008G093300 Sobic009G027200--Sobic008G093300 Sobic004G115100 Sobic004G115100 Sobic009G027200--Sobic004G115100 Sobic006G029850 Sobic006G029850 Sobic009G027200--Sobic006G029850 Sobic009G027200--Sobic001G207301 Sobic006G035350 Sobic006G035350 Sobic009G027200--Sobic006G035350 Sobic008G100201 Sobic008G100201 Sobic009G027200--Sobic008G100201 Sobic003G169700 Sobic003G169700 Sobic001G207301--Sobic003G169700 SobicK031400 SobicK031400 Sobic001G207301--SobicK031400 Sobic001G207301--Sobic006G217400 Sobic004G332200 Sobic004G332200 Sobic001G207301--Sobic004G332200 Sobic001G207301--Sobic006G205800 Sobic006G261650 Sobic006G261650 Sobic001G207301--Sobic006G261650 Sobic003G163000 Sobic003G163000 Sobic001G207301--Sobic003G163000 Sobic001G420150 Sobic001G420150 Sobic001G207301--Sobic001G420150 Sobic004G291300 Sobic004G291300 Sobic001G207301--Sobic004G291300 Sobic001G501701--Sobic001G097800 Sobic001G501701--Sobic003G396050 Sobic009G200632 Sobic009G200632 Sobic001G501701--Sobic009G200632 Sobic001G499400 Sobic001G499400 Sobic001G501701--Sobic001G499400 Sobic001G501701--Sobic003G039800 Sobic001G501701--Sobic006G205800 Sobic001G501701--Sobic003G314200 Sobic006G192150 Sobic006G192150 Sobic001G501701--Sobic006G192150 Sobic007G138600 Sobic007G138600 Sobic001G501701--Sobic007G138600 Sobic001G020200 Sobic001G020200 Sobic004G338200--Sobic001G020200 Sobic004G243000 Sobic004G243000 Sobic004G338200--Sobic004G243000 Sobic004G338200--Sobic003G314200 Sobic007G227500 Sobic007G227500 Sobic004G338200--Sobic007G227500 Sobic004G338200--Sobic008G040800 Sobic009G182500 Sobic009G182500 Sobic004G338200--Sobic009G182500 Sobic003G268800 Sobic003G268800 Sobic004G338200--Sobic003G268800 Sobic009G161700 Sobic009G161700 Sobic004G338200--Sobic009G161700 Sobic004G338200--Sobic006G094800
Octagon: transcription factors


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