Gene annotation
Transcriptome id Sobic.009G027200.1
Synonym Sb09g002270, TET6
Functional annotation tetraspanin family protein, putative, expressed
UniProt C5YZ45
Pfam PF00335
Panther DB PTHR32191 PTHR32191:SF1
NCBI CDD KOG3882; Tetraspanin family integral membrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G12090 : tetraspanin6
RAP-DB (Rice) LOC_Os05g03530.3 : tetraspanin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a040728 , Zm00025a039028 , Zm00025a038183
Brachypodium KQK07868 , KQK07869
Barley HORVU1Hr1G014070.13 , HORVU1Hr1G014070.12 , HORVU1Hr1G014070.11 , HORVU1Hr1G014070.10 , HORVU1Hr1G014070.9 , HORVU1Hr1G014070.8 , HORVU1Hr1G014070.3 , HORVU1Hr1G014070.2 , HORVU1Hr1G014070.1 , HORVU1Hr1G014070.7 , HORVU1Hr1G014070.6 , HORVU1Hr1G014070.5 , HORVU1Hr1G014070.4
Wheat TraesCS1D02G069300 , TraesCS1D02G069300 , TraesCS1A02G067900 , TraesCS1A02G067900 , TraesCS1B02G086100 , TraesCS1B02G086100
Populus -


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cDNA sequences
Sobic.009G027200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G217400 expressed protein -
2 Sobic.007G200700 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
3 Sobic.003G226600 WRKY12, expressed -
4 Sobic.008G093300 - -
5 Sobic.004G115100 DNA-directed RNA polymerase subunit beta, putative, expressed K03043: DNA-directed RNA polymerase subunit beta
6 Sobic.006G029850 - -
7 Sobic.001G207301 - -
8 Sobic.006G035350 - K02986: RP-S4, small subunit ribosomal protein S4
9 Sobic.008G100201 - -
10 Sobic.K032200 ATP synthase protein MI25, putative, expressed -
11 Sobic.001G261444 - -
12 Sobic.004G134400 - -
13 Sobic.010G039150 - -
14 Sobic.009G079600 - -
15 Sobic.001G255866 - -
16 Sobic.001G423200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
17 Sobic.003G187600 PPR repeat containing protein, expressed -
18 Sobic.004G274300 no apical meristem protein, putative, expressed -
19 Sobic.001G383350 - -
20 Sobic.K031400 ATP synthase protein YMF19, putative, expressed K02109: ATPF0B, F-type H+-transporting ATPase subunit b


Gene co-expression network
sample Sobic009G027200 Sobic009G027200 Sobic006G217400 Sobic006G217400 Sobic009G027200--Sobic006G217400 Sobic007G200700 Sobic007G200700 Sobic009G027200--Sobic007G200700 Sobic003G226600 Sobic003G226600 Sobic009G027200--Sobic003G226600 Sobic008G093300 Sobic008G093300 Sobic009G027200--Sobic008G093300 Sobic004G115100 Sobic004G115100 Sobic009G027200--Sobic004G115100 Sobic006G029850 Sobic006G029850 Sobic009G027200--Sobic006G029850 Sobic001G207301 Sobic001G207301 Sobic009G027200--Sobic001G207301 Sobic006G035350 Sobic006G035350 Sobic009G027200--Sobic006G035350 Sobic008G100201 Sobic008G100201 Sobic009G027200--Sobic008G100201 Sobic003G172966 Sobic003G172966 Sobic006G217400--Sobic003G172966 Sobic006G217400--Sobic007G200700 Sobic006G217400--Sobic004G115100 SobicK032200 SobicK032200 Sobic006G217400--SobicK032200 Sobic006G107700 Sobic006G107700 Sobic006G217400--Sobic006G107700 Sobic003G056200 Sobic003G056200 Sobic006G217400--Sobic003G056200 SobicK031900 SobicK031900 Sobic006G217400--SobicK031900 Sobic001G261444 Sobic001G261444 Sobic006G217400--Sobic001G261444 Sobic006G217400--Sobic008G100201 Sobic007G200700--Sobic004G115100 Sobic001G383350 Sobic001G383350 Sobic007G200700--Sobic001G383350 Sobic007G200700--Sobic001G261444 Sobic007G200700--Sobic008G100201 Sobic007G200700--Sobic006G029850 Sobic007G200700--SobicK031900 Sobic007G200700--SobicK032200 Sobic010G143700 Sobic010G143700 Sobic007G200700--Sobic010G143700 Sobic007G200700--Sobic006G035350 Sobic001G450900 Sobic001G450900 Sobic003G226600--Sobic001G450900 Sobic005G021400 Sobic005G021400 Sobic003G226600--Sobic005G021400 Sobic003G226600--Sobic001G207301 Sobic005G104900 Sobic005G104900 Sobic003G226600--Sobic005G104900 Sobic003G226600--Sobic006G217400 Sobic001G535850 Sobic001G535850 Sobic003G226600--Sobic001G535850 Sobic002G401533 Sobic002G401533 Sobic003G226600--Sobic002G401533 Sobic003G226600--Sobic009G027200 Sobic003G161900 Sobic003G161900 Sobic003G226600--Sobic003G161900 Sobic008G093300--Sobic006G035350 Sobic010G247750 Sobic010G247750 Sobic008G093300--Sobic010G247750 Sobic007G127200 Sobic007G127200 Sobic008G093300--Sobic007G127200 Sobic004G127733 Sobic004G127733 Sobic008G093300--Sobic004G127733 Sobic003G260500 Sobic003G260500 Sobic008G093300--Sobic003G260500 Sobic008G093300--Sobic008G100201 Sobic007G103200 Sobic007G103200 Sobic008G093300--Sobic007G103200 Sobic008G093300--Sobic010G143700 Sobic004G134400 Sobic004G134400 Sobic008G093300--Sobic004G134400 Sobic004G115100--Sobic008G100201 Sobic004G115100--Sobic007G200700 Sobic004G115100--Sobic001G383350 Sobic004G115100--Sobic006G029850 Sobic004G115100--Sobic001G261444 Sobic004G115100--SobicK031900 Sobic004G115100--Sobic006G035350 Sobic004G115100--Sobic010G143700 Sobic006G107766 Sobic006G107766 Sobic004G115100--Sobic006G107766 Sobic006G029850--Sobic001G383350 Sobic006G029850--Sobic004G115100 SobicK032400 SobicK032400 Sobic006G029850--SobicK032400 Sobic006G029850--Sobic007G200700 SobicK032350 SobicK032350 Sobic006G029850--SobicK032350 Sobic006G029850--Sobic001G261444 Sobic006G029850--SobicK032200 Sobic004G120150 Sobic004G120150 Sobic006G029850--Sobic004G120150 SobicK032600 SobicK032600 Sobic006G029850--SobicK032600 Sobic003G169700 Sobic003G169700 Sobic001G207301--Sobic003G169700 SobicK031400 SobicK031400 Sobic001G207301--SobicK031400 Sobic001G207301--Sobic006G217400 Sobic004G332200 Sobic004G332200 Sobic001G207301--Sobic004G332200 Sobic006G205800 Sobic006G205800 Sobic001G207301--Sobic006G205800 Sobic006G261650 Sobic006G261650 Sobic001G207301--Sobic006G261650 Sobic003G163000 Sobic003G163000 Sobic001G207301--Sobic003G163000 Sobic001G420150 Sobic001G420150 Sobic001G207301--Sobic001G420150 Sobic004G291300 Sobic004G291300 Sobic001G207301--Sobic004G291300 Sobic006G035350--Sobic008G093300 Sobic006G035350--Sobic010G247750 Sobic006G035350--Sobic004G127733 Sobic006G035350--Sobic008G100201 Sobic006G035350--Sobic003G260500 Sobic006G035350--Sobic004G115100 Sobic006G035350--Sobic010G143700 Sobic006G035350--Sobic007G103200 Sobic006G035350--Sobic007G127200 Sobic008G100201--Sobic004G115100 Sobic008G100201--Sobic007G200700 Sobic008G100201--Sobic006G035350 Sobic008G100201--SobicK031900 Sobic008G100201--Sobic010G143700 Sobic008G100201--Sobic003G260500 Sobic008G100201--Sobic001G383350 Sobic008G100201--Sobic006G029850 Sobic008G100201--Sobic001G261444
Octagon: transcription factors


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