Gene annotation
Transcriptome id Sobic.K032200.1
Synonym
Functional annotation ATP synthase protein MI25, putative, expressed
UniProt Q35784 , Q09EK0 , C6JSF3 , Q35783
Pfam PF05405
Panther DB PTHR37774:SF1 PTHR37774
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0015078; proton transmembrane transporter activity GO:0015986ATP synthesis coupled proton transport


Orthologs (automatic annotation)
TAIR ATMG00640 : hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding
RAP-DB (Rice) LOC_Os12g14930.1 : ATP synthase protein MI25, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK19300
Barley HORVU3Hr1G050700.2 , HORVU3Hr1G050700.1 , HORVU2Hr1G096060.1 , HORVU3Hr1G045000.1 , HORVU6Hr1G001790.1 , HORVU3Hr1G113900.1 , HORVU5Hr1G072290.2 , HORVU5Hr1G072290.1 , BAV58145
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G475950 - -
2 Sobic.001G261444 - -
3 Sobic.010G201332 - -
4 Sobic.003G172966 - K05582: NAD(P)H-quinone oxidoreductase subunit K
5 Sobic.004G126050 - -
6 Sobic.003G056200 - -
7 Sobic.001G383350 - -
8 Sobic.001G506200 - -
9 Sobic.006G029850 - -
10 Sobic.007G200700 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
11 Sobic.005G065800 - -
12 Sobic.002G358450 - -
13 Sobic.004G115100 DNA-directed RNA polymerase subunit beta, putative, expressed K03043: DNA-directed RNA polymerase subunit beta
14 Sobic.006G107700 OsMADS27 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
15 Sobic.002G401533 - -
16 Sobic.003G161900 - -
17 Sobic.004G120150 - K02132: ATPeF1A, ATP5A1, F-type H+-transporting ATPase subunit alpha
18 Sobic.K032350 - -
19 Sobic.007G183200 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed K18486: heart-and neural crest derivatives-expressed protein 2
20 Sobic.009G257000 - -


Gene co-expression network
sample SobicK032200 SobicK032200 Sobic001G475950 Sobic001G475950 SobicK032200--Sobic001G475950 Sobic001G261444 Sobic001G261444 SobicK032200--Sobic001G261444 Sobic010G201332 Sobic010G201332 SobicK032200--Sobic010G201332 Sobic003G172966 Sobic003G172966 SobicK032200--Sobic003G172966 Sobic004G126050 Sobic004G126050 SobicK032200--Sobic004G126050 Sobic003G056200 Sobic003G056200 SobicK032200--Sobic003G056200 Sobic001G383350 Sobic001G383350 SobicK032200--Sobic001G383350 Sobic001G506200 Sobic001G506200 SobicK032200--Sobic001G506200 Sobic006G029850 Sobic006G029850 SobicK032200--Sobic006G029850 Sobic001G475950--SobicK032200 Sobic001G475950--Sobic003G056200 Sobic001G475950--Sobic003G172966 Sobic001G475950--Sobic001G261444 Sobic002G358450 Sobic002G358450 Sobic001G475950--Sobic002G358450 Sobic001G475950--Sobic010G201332 Sobic001G475950--Sobic004G126050 Sobic006G107700 Sobic006G107700 Sobic001G475950--Sobic006G107700 Sobic002G401533 Sobic002G401533 Sobic001G475950--Sobic002G401533 Sobic001G261444--SobicK032200 Sobic007G200700 Sobic007G200700 Sobic001G261444--Sobic007G200700 Sobic001G261444--Sobic001G383350 Sobic004G115100 Sobic004G115100 Sobic001G261444--Sobic004G115100 Sobic001G261444--Sobic001G475950 Sobic003G161900 Sobic003G161900 Sobic001G261444--Sobic003G161900 Sobic001G261444--Sobic006G029850 Sobic001G261444--Sobic010G201332 Sobic008G100201 Sobic008G100201 Sobic001G261444--Sobic008G100201 Sobic010G201332--SobicK032200 Sobic005G065800 Sobic005G065800 Sobic010G201332--Sobic005G065800 Sobic010G201332--Sobic002G358450 Sobic010G201332--Sobic001G475950 Sobic010G201332--Sobic001G506200 Sobic010G201332--Sobic001G261444 Sobic010G201332--Sobic001G383350 Sobic007G183200 Sobic007G183200 Sobic010G201332--Sobic007G183200 Sobic010G201332--Sobic004G126050 Sobic003G172966--Sobic003G056200 Sobic003G172966--SobicK032200 Sobic003G172966--Sobic004G126050 Sobic003G172966--Sobic001G475950 Sobic003G172966--Sobic006G107700 Sobic009G097400 Sobic009G097400 Sobic003G172966--Sobic009G097400 Sobic003G172966--Sobic001G261444 Sobic003G172966--Sobic007G200700 Sobic003G172966--Sobic004G115100 Sobic004G126050--Sobic003G172966 Sobic004G126050--SobicK032200 Sobic004G126050--Sobic001G475950 Sobic004G126050--Sobic003G056200 Sobic004G126050--Sobic010G201332 Sobic004G126050--Sobic005G065800 Sobic004G126050--Sobic002G358450 Sobic004G126050--Sobic001G261444 Sobic004G126050--Sobic006G107700 Sobic003G056200--Sobic003G172966 Sobic003G056200--Sobic001G475950 Sobic003G056200--Sobic006G107700 Sobic003G056200--SobicK032200 Sobic003G056200--Sobic004G126050 Sobic003G056200--Sobic002G401533 Sobic003G056200--Sobic001G261444 Sobic003G056200--Sobic002G358450 Sobic003G056200--Sobic003G161900 Sobic001G383350--Sobic006G029850 Sobic001G383350--Sobic007G200700 Sobic001G383350--Sobic004G115100 Sobic001G383350--Sobic001G261444 SobicK032400 SobicK032400 Sobic001G383350--SobicK032400 Sobic001G383350--SobicK032200 SobicK032600 SobicK032600 Sobic001G383350--SobicK032600 Sobic001G383350--Sobic008G100201 Sobic002G112500 Sobic002G112500 Sobic001G383350--Sobic002G112500 Sobic001G506200--Sobic010G201332 Sobic001G506200--SobicK032200 Sobic001G506200--Sobic001G475950 Sobic004G120150 Sobic004G120150 Sobic001G506200--Sobic004G120150 Sobic001G506200--Sobic006G029850 Sobic001G506200--Sobic001G261444 SobicK032350 SobicK032350 Sobic001G506200--SobicK032350 Sobic001G506200--Sobic001G383350 Sobic001G506200--Sobic004G126050 Sobic006G029850--Sobic001G383350 Sobic006G029850--Sobic004G115100 Sobic006G029850--SobicK032400 Sobic006G029850--Sobic007G200700 Sobic006G029850--SobicK032350 Sobic006G029850--Sobic001G261444 Sobic006G029850--SobicK032200 Sobic006G029850--Sobic004G120150 Sobic006G029850--SobicK032600
Octagon: transcription factors


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