Gene annotation
Transcriptome id Sobic.001G506200.2
Synonym
Functional annotation -
UniProt A0A1Z5SBW3 , Q09EK1
Pfam -
Panther DB PTHR30070
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR ATMG00110 : cytochrome C biogenesis 206
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G122840.2 , HORVU2Hr1G061240.1 , HORVU3Hr1G050690.1 , HORVU4Hr1G038820.1 , HORVU3Hr1G050690.2 , HORVU2Hr1G122840.1 , BAV58146
Wheat TraesCS2A02G509500 , TraesCS3D02G376900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G201332 - -
2 Sobic.K032200 ATP synthase protein MI25, putative, expressed -
3 Sobic.001G475950 - -
4 Sobic.004G120150 - K02132: ATPeF1A, ATP5A1, F-type H+-transporting ATPase subunit alpha
5 Sobic.006G029850 - -
6 Sobic.001G261444 - -
7 Sobic.K032350 - -
8 Sobic.001G383350 - -
9 Sobic.004G126050 - -
10 Sobic.003G172966 - K05582: NAD(P)H-quinone oxidoreductase subunit K
11 Sobic.002G358450 - -
12 Sobic.003G056200 - -
13 Sobic.009G257000 - -
14 Sobic.005G065800 - -
15 Sobic.004G115100 DNA-directed RNA polymerase subunit beta, putative, expressed K03043: DNA-directed RNA polymerase subunit beta
16 Sobic.007G200700 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
17 Sobic.003G172800 ribulose bisphosphate carboxylase large chain precursor, putative, expressed K01601: ribulose-bisphosphate carboxylase large chain
18 Sobic.006G107700 OsMADS27 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
19 Sobic.006G264400 co-chaperone GrpE protein, putative, expressed -
20 Sobic.005G139900 chloroplast 30S ribosomal protein S7, putative, expressed K02992: RP-S7, MRPS7, small subunit ribosomal protein S7


Gene co-expression network
sample Sobic001G506200 Sobic001G506200 Sobic010G201332 Sobic010G201332 Sobic001G506200--Sobic010G201332 SobicK032200 SobicK032200 Sobic001G506200--SobicK032200 Sobic001G475950 Sobic001G475950 Sobic001G506200--Sobic001G475950 Sobic004G120150 Sobic004G120150 Sobic001G506200--Sobic004G120150 Sobic006G029850 Sobic006G029850 Sobic001G506200--Sobic006G029850 Sobic001G261444 Sobic001G261444 Sobic001G506200--Sobic001G261444 SobicK032350 SobicK032350 Sobic001G506200--SobicK032350 Sobic001G383350 Sobic001G383350 Sobic001G506200--Sobic001G383350 Sobic004G126050 Sobic004G126050 Sobic001G506200--Sobic004G126050 Sobic010G201332--SobicK032200 Sobic005G065800 Sobic005G065800 Sobic010G201332--Sobic005G065800 Sobic002G358450 Sobic002G358450 Sobic010G201332--Sobic002G358450 Sobic010G201332--Sobic001G475950 Sobic010G201332--Sobic001G506200 Sobic010G201332--Sobic001G261444 Sobic010G201332--Sobic001G383350 Sobic007G183200 Sobic007G183200 Sobic010G201332--Sobic007G183200 Sobic010G201332--Sobic004G126050 SobicK032200--Sobic001G475950 SobicK032200--Sobic001G261444 SobicK032200--Sobic010G201332 Sobic003G172966 Sobic003G172966 SobicK032200--Sobic003G172966 SobicK032200--Sobic004G126050 Sobic003G056200 Sobic003G056200 SobicK032200--Sobic003G056200 SobicK032200--Sobic001G383350 SobicK032200--Sobic001G506200 SobicK032200--Sobic006G029850 Sobic001G475950--SobicK032200 Sobic001G475950--Sobic003G056200 Sobic001G475950--Sobic003G172966 Sobic001G475950--Sobic001G261444 Sobic001G475950--Sobic002G358450 Sobic001G475950--Sobic010G201332 Sobic001G475950--Sobic004G126050 Sobic006G107700 Sobic006G107700 Sobic001G475950--Sobic006G107700 Sobic002G401533 Sobic002G401533 Sobic001G475950--Sobic002G401533 Sobic004G120150--SobicK032350 Sobic004G120150--Sobic006G029850 Sobic002G042700 Sobic002G042700 Sobic004G120150--Sobic002G042700 Sobic004G120150--Sobic001G506200 Sobic004G120150--Sobic001G383350 Sobic004G120150--SobicK032200 Sobic006G107766 Sobic006G107766 Sobic004G120150--Sobic006G107766 Sobic002G134800 Sobic002G134800 Sobic004G120150--Sobic002G134800 Sobic009G209650 Sobic009G209650 Sobic004G120150--Sobic009G209650 Sobic006G029850--Sobic001G383350 Sobic004G115100 Sobic004G115100 Sobic006G029850--Sobic004G115100 SobicK032400 SobicK032400 Sobic006G029850--SobicK032400 Sobic007G200700 Sobic007G200700 Sobic006G029850--Sobic007G200700 Sobic006G029850--SobicK032350 Sobic006G029850--Sobic001G261444 Sobic006G029850--SobicK032200 Sobic006G029850--Sobic004G120150 SobicK032600 SobicK032600 Sobic006G029850--SobicK032600 Sobic001G261444--SobicK032200 Sobic001G261444--Sobic007G200700 Sobic001G261444--Sobic001G383350 Sobic001G261444--Sobic004G115100 Sobic001G261444--Sobic001G475950 Sobic003G161900 Sobic003G161900 Sobic001G261444--Sobic003G161900 Sobic001G261444--Sobic006G029850 Sobic001G261444--Sobic010G201332 Sobic008G100201 Sobic008G100201 Sobic001G261444--Sobic008G100201 SobicK032350--SobicK032400 SobicK032350--Sobic004G120150 SobicK032350--Sobic009G209650 SobicK032350--Sobic006G029850 SobicK032350--SobicK032600 Sobic002G126700 Sobic002G126700 SobicK032350--Sobic002G126700 Sobic006G264400 Sobic006G264400 SobicK032350--Sobic006G264400 SobicK032350--Sobic001G383350 Sobic009G095720 Sobic009G095720 SobicK032350--Sobic009G095720 Sobic001G383350--Sobic006G029850 Sobic001G383350--Sobic007G200700 Sobic001G383350--Sobic004G115100 Sobic001G383350--Sobic001G261444 Sobic001G383350--SobicK032400 Sobic001G383350--SobicK032200 Sobic001G383350--SobicK032600 Sobic001G383350--Sobic008G100201 Sobic002G112500 Sobic002G112500 Sobic001G383350--Sobic002G112500 Sobic004G126050--Sobic003G172966 Sobic004G126050--SobicK032200 Sobic004G126050--Sobic001G475950 Sobic004G126050--Sobic003G056200 Sobic004G126050--Sobic010G201332 Sobic004G126050--Sobic005G065800 Sobic004G126050--Sobic002G358450 Sobic004G126050--Sobic001G261444 Sobic004G126050--Sobic006G107700
Octagon: transcription factors


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