Gene annotation
Transcriptome id Sobic.003G172966.1
Synonym -
Functional annotation -
UniProt C5XLG2 , A0A109NDK4 , A1E9S8
Pfam PF01058
Panther DB PTHR11995 PTHR11995:SF21
NCBI CDD KOG1687; NADH-ubiquinone oxidoreductase, NUFS7/PSST/20 kDa subunit
KEGG Orthology K05582; NAD(P)H-quinone oxidoreductase subunit K
Gene Ontology -


Orthologs (automatic annotation)
TAIR ATCG00430 : photosystem II reaction center protein G
RAP-DB (Rice) LOC_Os01g58022.1 : NADPH-dependent oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a057751 , Zm00025a057673 , Zm00025a057585 , Zm00025a057720 , Zm00025a057711 , Zm00025a057615 , Zm00025a057155
Brachypodium KQK05576 , KQK18170 , PNT68804 , PNT60819 , KQJ84937 , KQK04352
Barley HORVU0Hr1G032810.1 , HORVU0Hr1G036360.3 , HORVU7Hr1G051200.1 , HORVU5Hr1G064680.1 , AGP50759 , HORVU6Hr1G049240.1 , HORVU2Hr1G035340.2 , HORVU0Hr1G036850.1 , HORVU4Hr1G045220.1
Wheat TraesCS1A02G384500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G056200 - -
2 Sobic.K032200 ATP synthase protein MI25, putative, expressed -
3 Sobic.004G126050 - -
4 Sobic.001G475950 - -
5 Sobic.006G107700 OsMADS27 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
6 Sobic.009G097400 - -
7 Sobic.001G261444 - -
8 Sobic.007G200700 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
9 Sobic.004G115100 DNA-directed RNA polymerase subunit beta, putative, expressed K03043: DNA-directed RNA polymerase subunit beta
10 Sobic.002G401533 - -
11 Sobic.010G201332 - -
12 Sobic.001G383350 - -
13 Sobic.003G322600 coiled-coil domain-containing protein, putative, expressed -
14 Sobic.005G065800 - -
15 Sobic.002G358450 - -
16 Sobic.009G204501 - -
17 Sobic.003G161900 - -
18 Sobic.001G255866 - -
19 Sobic.006G029850 - -
20 Sobic.K031900 - -


Gene co-expression network
sample Sobic003G172966 Sobic003G172966 Sobic003G056200 Sobic003G056200 Sobic003G172966--Sobic003G056200 SobicK032200 SobicK032200 Sobic003G172966--SobicK032200 Sobic004G126050 Sobic004G126050 Sobic003G172966--Sobic004G126050 Sobic001G475950 Sobic001G475950 Sobic003G172966--Sobic001G475950 Sobic006G107700 Sobic006G107700 Sobic003G172966--Sobic006G107700 Sobic009G097400 Sobic009G097400 Sobic003G172966--Sobic009G097400 Sobic001G261444 Sobic001G261444 Sobic003G172966--Sobic001G261444 Sobic007G200700 Sobic007G200700 Sobic003G172966--Sobic007G200700 Sobic004G115100 Sobic004G115100 Sobic003G172966--Sobic004G115100 Sobic003G056200--Sobic003G172966 Sobic003G056200--Sobic001G475950 Sobic003G056200--Sobic006G107700 Sobic003G056200--SobicK032200 Sobic003G056200--Sobic004G126050 Sobic002G401533 Sobic002G401533 Sobic003G056200--Sobic002G401533 Sobic003G056200--Sobic001G261444 Sobic002G358450 Sobic002G358450 Sobic003G056200--Sobic002G358450 Sobic003G161900 Sobic003G161900 Sobic003G056200--Sobic003G161900 SobicK032200--Sobic001G475950 SobicK032200--Sobic001G261444 Sobic010G201332 Sobic010G201332 SobicK032200--Sobic010G201332 SobicK032200--Sobic003G172966 SobicK032200--Sobic004G126050 SobicK032200--Sobic003G056200 Sobic001G383350 Sobic001G383350 SobicK032200--Sobic001G383350 Sobic001G506200 Sobic001G506200 SobicK032200--Sobic001G506200 Sobic006G029850 Sobic006G029850 SobicK032200--Sobic006G029850 Sobic004G126050--Sobic003G172966 Sobic004G126050--SobicK032200 Sobic004G126050--Sobic001G475950 Sobic004G126050--Sobic003G056200 Sobic004G126050--Sobic010G201332 Sobic005G065800 Sobic005G065800 Sobic004G126050--Sobic005G065800 Sobic004G126050--Sobic002G358450 Sobic004G126050--Sobic001G261444 Sobic004G126050--Sobic006G107700 Sobic001G475950--SobicK032200 Sobic001G475950--Sobic003G056200 Sobic001G475950--Sobic003G172966 Sobic001G475950--Sobic001G261444 Sobic001G475950--Sobic002G358450 Sobic001G475950--Sobic010G201332 Sobic001G475950--Sobic004G126050 Sobic001G475950--Sobic006G107700 Sobic001G475950--Sobic002G401533 Sobic006G107700--Sobic003G056200 Sobic006G107700--Sobic002G401533 Sobic009G257000 Sobic009G257000 Sobic006G107700--Sobic009G257000 Sobic006G107700--Sobic003G172966 Sobic006G107700--Sobic001G475950 Sobic006G107700--Sobic003G161900 Sobic006G107700--Sobic001G261444 Sobic006G107700--SobicK032200 Sobic001G037033 Sobic001G037033 Sobic006G107700--Sobic001G037033 Sobic003G416200 Sobic003G416200 Sobic009G097400--Sobic003G416200 Sobic009G097400--Sobic003G172966 Sobic009G204501 Sobic009G204501 Sobic009G097400--Sobic009G204501 Sobic009G097400--Sobic003G056200 Sobic009G097400--Sobic004G126050 Sobic001G255866 Sobic001G255866 Sobic009G097400--Sobic001G255866 Sobic001G436450 Sobic001G436450 Sobic009G097400--Sobic001G436450 Sobic003G322600 Sobic003G322600 Sobic009G097400--Sobic003G322600 Sobic009G097400--SobicK032200 Sobic001G261444--SobicK032200 Sobic001G261444--Sobic007G200700 Sobic001G261444--Sobic001G383350 Sobic001G261444--Sobic004G115100 Sobic001G261444--Sobic001G475950 Sobic001G261444--Sobic003G161900 Sobic001G261444--Sobic006G029850 Sobic001G261444--Sobic010G201332 Sobic008G100201 Sobic008G100201 Sobic001G261444--Sobic008G100201 Sobic007G200700--Sobic004G115100 Sobic007G200700--Sobic001G383350 Sobic007G200700--Sobic001G261444 Sobic007G200700--Sobic008G100201 Sobic007G200700--Sobic006G029850 SobicK031900 SobicK031900 Sobic007G200700--SobicK031900 Sobic007G200700--SobicK032200 Sobic010G143700 Sobic010G143700 Sobic007G200700--Sobic010G143700 Sobic006G035350 Sobic006G035350 Sobic007G200700--Sobic006G035350 Sobic004G115100--Sobic008G100201 Sobic004G115100--Sobic007G200700 Sobic004G115100--Sobic001G383350 Sobic004G115100--Sobic006G029850 Sobic004G115100--Sobic001G261444 Sobic004G115100--SobicK031900 Sobic004G115100--Sobic006G035350 Sobic004G115100--Sobic010G143700 Sobic006G107766 Sobic006G107766 Sobic004G115100--Sobic006G107766
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.