Gene annotation
Transcriptome id Sobic.K031400.1
Synonym
Functional annotation ATP synthase protein YMF19, putative, expressed
UniProt Q09EK6
Pfam PF02326 PF06449
Panther DB PTHR36816 PTHR36816:SF1
NCBI CDD -
KEGG Orthology K02109; ATPF0B, F-type H+-transporting ATPase subunit b
Gene Ontology GO:0016021; integral component of membrane GO:0005739mitochondrion


Orthologs (automatic annotation)
TAIR ATMG00480 : Plant mitochondrial ATPase, F0 complex, subunit 8 protein
RAP-DB (Rice) LOC_Os12g34018.1 : ATP synthase protein YMF19, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G089600.1 , HORVU7Hr1G089600.2 , HORVU2Hr1G034000.1 , HORVU4Hr1G059430.1 , HORVU6Hr1G039040.1 , BAV58133
Wheat TraesCS3B02G430700 , TraesCS7A02G164600 , TraesCS2B02G265400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G268100 - -
2 Sobic.003G173200 NADH-ubiquinone oxidoreductase chain 4, putative, expressed -
3 Sobic.010G143700 - -
4 Sobic.K031900 - -
5 Sobic.009G215100 jacalin-like lectin domain containing protein, expressed -
6 Sobic.001G224500 - -
7 Sobic.007G116150 - -
8 Sobic.006G053550 - -
9 Sobic.010G098800 NADH-ubiquinone oxidoreductase chain 6, putative, expressed K03884: NADH-ubiquinone oxidoreductase chain 6
10 Sobic.010G247750 - -
11 Sobic.008G100201 - -
12 Sobic.004G310350 - -
13 Sobic.006G035350 - K02986: RP-S4, small subunit ribosomal protein S4
14 Sobic.002G112500 - -
15 Sobic.004G115100 DNA-directed RNA polymerase subunit beta, putative, expressed K03043: DNA-directed RNA polymerase subunit beta
16 Sobic.005G176300 Leucine Rich Repeat family protein, expressed -
17 Sobic.004G223700 - -
18 Sobic.007G200700 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
19 Sobic.009G094100 - -
20 Sobic.003G260500 - -


Gene co-expression network
sample SobicK031400 SobicK031400 Sobic003G268100 Sobic003G268100 SobicK031400--Sobic003G268100 Sobic003G173200 Sobic003G173200 SobicK031400--Sobic003G173200 Sobic010G143700 Sobic010G143700 SobicK031400--Sobic010G143700 SobicK031900 SobicK031900 SobicK031400--SobicK031900 Sobic009G215100 Sobic009G215100 SobicK031400--Sobic009G215100 Sobic001G224500 Sobic001G224500 SobicK031400--Sobic001G224500 Sobic007G116150 Sobic007G116150 SobicK031400--Sobic007G116150 Sobic006G053550 Sobic006G053550 SobicK031400--Sobic006G053550 Sobic010G098800 Sobic010G098800 SobicK031400--Sobic010G098800 Sobic003G268100--Sobic010G143700 Sobic003G268100--Sobic007G116150 Sobic003G268100--Sobic003G173200 Sobic003G268100--SobicK031400 Sobic003G268100--SobicK031900 Sobic004G130500 Sobic004G130500 Sobic003G268100--Sobic004G130500 Sobic009G094100 Sobic009G094100 Sobic003G268100--Sobic009G094100 Sobic010G247750 Sobic010G247750 Sobic003G268100--Sobic010G247750 Sobic006G035350 Sobic006G035350 Sobic003G268100--Sobic006G035350 Sobic003G173200--Sobic003G268100 Sobic003G173200--Sobic009G215100 Sobic003G173200--SobicK031400 Sobic003G173200--Sobic007G116150 Sobic003G173200--Sobic010G098800 Sobic003G173200--Sobic010G143700 Sobic003G173200--Sobic006G053550 Sobic004G223700 Sobic004G223700 Sobic003G173200--Sobic004G223700 Sobic002G073000 Sobic002G073000 Sobic003G173200--Sobic002G073000 Sobic010G143700--Sobic003G268100 Sobic010G143700--Sobic007G116150 Sobic010G143700--Sobic004G130500 Sobic010G143700--SobicK031900 Sobic008G100201 Sobic008G100201 Sobic010G143700--Sobic008G100201 Sobic010G143700--Sobic006G035350 SobicK032400 SobicK032400 Sobic010G143700--SobicK032400 Sobic009G209650 Sobic009G209650 Sobic010G143700--Sobic009G209650 Sobic004G115100 Sobic004G115100 Sobic010G143700--Sobic004G115100 SobicK031900--Sobic008G100201 SobicK031900--Sobic010G143700 SobicK031900--Sobic003G268100 SobicK031900--Sobic004G115100 Sobic007G200700 Sobic007G200700 SobicK031900--Sobic007G200700 SobicK031900--Sobic007G116150 SobicK031900--SobicK031400 SobicK031900--Sobic006G035350 Sobic001G383350 Sobic001G383350 SobicK031900--Sobic001G383350 Sobic009G215100--Sobic006G053550 Sobic009G215100--Sobic003G173200 Sobic003G205000 Sobic003G205000 Sobic009G215100--Sobic003G205000 Sobic009G215100--SobicK031400 Sobic009G215100--Sobic003G268100 Sobic009G215100--Sobic010G098800 Sobic009G215100--Sobic001G224500 Sobic009G215100--SobicK031900 Sobic004G310350 Sobic004G310350 Sobic009G215100--Sobic004G310350 Sobic001G224500--Sobic006G053550 Sobic001G224500--SobicK031400 Sobic001G224500--Sobic003G268100 Sobic001G224500--Sobic010G247750 Sobic008G129500 Sobic008G129500 Sobic001G224500--Sobic008G129500 Sobic001G224500--Sobic010G143700 Sobic001G224500--SobicK031900 Sobic001G224500--Sobic009G215100 Sobic002G112500 Sobic002G112500 Sobic001G224500--Sobic002G112500 Sobic007G116150--Sobic010G143700 Sobic007G116150--Sobic003G268100 Sobic007G116150--SobicK032400 SobicK032600 SobicK032600 Sobic007G116150--SobicK032600 Sobic007G116150--Sobic010G098800 Sobic001G081450 Sobic001G081450 Sobic007G116150--Sobic001G081450 Sobic007G116150--Sobic009G209650 Sobic007G116150--Sobic004G223700 Sobic007G116150--Sobic003G173200 Sobic006G053550--Sobic009G215100 Sobic006G053550--Sobic004G310350 Sobic006G053550--Sobic003G205000 Sobic006G053550--Sobic001G224500 Sobic006G053550--SobicK031400 Sobic006G053550--Sobic003G173200 Sobic006G053550--SobicK031900 Sobic006G053550--Sobic003G268100 Sobic002G334700 Sobic002G334700 Sobic006G053550--Sobic002G334700 Sobic010G098800--Sobic004G223700 Sobic010G098800--Sobic007G116150 Sobic010G098800--Sobic001G081450 Sobic010G098800--Sobic003G173200 Sobic004G206000 Sobic004G206000 Sobic010G098800--Sobic004G206000 Sobic010G098800--SobicK032600 Sobic009G148400 Sobic009G148400 Sobic010G098800--Sobic009G148400 Sobic010G098800--SobicK032400 Sobic010G098800--Sobic003G268100
Octagon: transcription factors


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