Gene annotation
Transcriptome id Sobic.006G205800.2,Sobic.006G205800.3
Synonym Sb06g027690
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
plant protein of unknown function domain containing protein, expressed
UniProt A0A1Z5RET0
Pfam PF03140
Panther DB PTHR31549 PTHR31549:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G44710 : Plant protein of unknown function (DUF247)
RAP-DB (Rice) LOC_Os09g08160.1 : plant protein of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a056958 , Zm00025a009903
Brachypodium KQK05688
Barley HORVU5Hr1G052180.1 , HORVU5Hr1G052180.3 , HORVU5Hr1G052180.2
Wheat TraesCS5A02G169700
Populus -


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cDNA sequences
Sobic.006G205800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G207301 - -
2 Sobic.006G112000 expressed protein -
3 Sobic.003G314200 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.003G348900 disease resistance-responsive family protein, putative, expressed -
5 Sobic.001G097800 - -
6 Sobic.006G094800 - -
7 Sobic.008G040800 OsFBX396 - F-box domain containing protein, expressed -
8 Sobic.007G159300 basic helix-loop-helix, putative, expressed -
9 Sobic.002G215866 - -
10 Sobic.004G061100 - -
11 Sobic.006G163033 - -
12 Sobic.002G392900 expressed protein -
13 Sobic.001G148000 a WRKY transcription factor which regulates cell wall biosynthesis genes. Seed shattering-related gene.(PubMedID : 24019506)@WRKY60, expressed -
14 Sobic.001G175200 expressed protein -
15 Sobic.006G224600 harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.001G501701 - -
17 Sobic.003G226600 WRKY12, expressed -
18 Sobic.006G261650 - -
19 Sobic.007G179200 peptidase, T1 family, putative, expressed K02738: 20S proteasome subunit beta 1
20 Sobic.010G091250 - -


Gene co-expression network
sample Sobic006G205800 Sobic006G205800 Sobic001G207301 Sobic001G207301 Sobic006G205800--Sobic001G207301 Sobic006G112000 Sobic006G112000 Sobic006G205800--Sobic006G112000 Sobic003G314200 Sobic003G314200 Sobic006G205800--Sobic003G314200 Sobic003G348900 Sobic003G348900 Sobic006G205800--Sobic003G348900 Sobic001G097800 Sobic001G097800 Sobic006G205800--Sobic001G097800 Sobic006G094800 Sobic006G094800 Sobic006G205800--Sobic006G094800 Sobic008G040800 Sobic008G040800 Sobic006G205800--Sobic008G040800 Sobic007G159300 Sobic007G159300 Sobic006G205800--Sobic007G159300 Sobic002G215866 Sobic002G215866 Sobic006G205800--Sobic002G215866 Sobic003G169700 Sobic003G169700 Sobic001G207301--Sobic003G169700 SobicK031400 SobicK031400 Sobic001G207301--SobicK031400 Sobic006G217400 Sobic006G217400 Sobic001G207301--Sobic006G217400 Sobic004G332200 Sobic004G332200 Sobic001G207301--Sobic004G332200 Sobic001G207301--Sobic006G205800 Sobic006G261650 Sobic006G261650 Sobic001G207301--Sobic006G261650 Sobic003G163000 Sobic003G163000 Sobic001G207301--Sobic003G163000 Sobic001G420150 Sobic001G420150 Sobic001G207301--Sobic001G420150 Sobic004G291300 Sobic004G291300 Sobic001G207301--Sobic004G291300 Sobic006G112000--Sobic003G348900 Sobic001G175200 Sobic001G175200 Sobic006G112000--Sobic001G175200 Sobic006G059150 Sobic006G059150 Sobic006G112000--Sobic006G059150 Sobic001G136850 Sobic001G136850 Sobic006G112000--Sobic001G136850 Sobic006G263250 Sobic006G263250 Sobic006G112000--Sobic006G263250 Sobic002G076350 Sobic002G076350 Sobic006G112000--Sobic002G076350 Sobic006G112000--Sobic001G207301 Sobic007G138600 Sobic007G138600 Sobic006G112000--Sobic007G138600 Sobic006G112000--Sobic006G261650 Sobic003G314200--Sobic008G040800 Sobic003G314200--Sobic006G205800 Sobic003G314200--Sobic006G094800 Sobic001G148000 Sobic001G148000 Sobic003G314200--Sobic001G148000 Sobic003G226600 Sobic003G226600 Sobic003G314200--Sobic003G226600 Sobic009G027200 Sobic009G027200 Sobic003G314200--Sobic009G027200 Sobic003G314200--Sobic001G207301 Sobic001G501701 Sobic001G501701 Sobic003G314200--Sobic001G501701 Sobic004G338200 Sobic004G338200 Sobic003G314200--Sobic004G338200 Sobic003G348900--Sobic006G112000 Sobic008G033800 Sobic008G033800 Sobic003G348900--Sobic008G033800 Sobic003G348900--Sobic001G207301 Sobic003G348900--Sobic004G291300 Sobic003G348900--Sobic006G205800 Sobic004G191901 Sobic004G191901 Sobic003G348900--Sobic004G191901 Sobic003G348900--Sobic002G076350 Sobic006G146700 Sobic006G146700 Sobic003G348900--Sobic006G146700 Sobic003G348900--Sobic001G136850 Sobic009G229500 Sobic009G229500 Sobic001G097800--Sobic009G229500 Sobic003G365450 Sobic003G365450 Sobic001G097800--Sobic003G365450 Sobic003G024450 Sobic003G024450 Sobic001G097800--Sobic003G024450 Sobic004G143550 Sobic004G143550 Sobic001G097800--Sobic004G143550 Sobic004G023800 Sobic004G023800 Sobic001G097800--Sobic004G023800 Sobic010G149000 Sobic010G149000 Sobic001G097800--Sobic010G149000 Sobic004G207733 Sobic004G207733 Sobic001G097800--Sobic004G207733 Sobic003G396050 Sobic003G396050 Sobic001G097800--Sobic003G396050 Sobic001G440401 Sobic001G440401 Sobic001G097800--Sobic001G440401 Sobic006G206600 Sobic006G206600 Sobic006G094800--Sobic006G206600 Sobic006G094800--Sobic001G207301 Sobic009G218700 Sobic009G218700 Sobic006G094800--Sobic009G218700 Sobic006G094800--Sobic003G314200 Sobic006G094800--Sobic003G226600 Sobic001G450900 Sobic001G450900 Sobic006G094800--Sobic001G450900 Sobic006G100150 Sobic006G100150 Sobic006G094800--Sobic006G100150 Sobic010G186900 Sobic010G186900 Sobic006G094800--Sobic010G186900 Sobic006G094800--Sobic001G148000 Sobic008G040800--Sobic003G314200 Sobic008G040800--Sobic009G027200 Sobic008G040800--Sobic001G097800 Sobic008G040800--Sobic003G396050 Sobic008G040800--Sobic009G229500 Sobic003G039800 Sobic003G039800 Sobic008G040800--Sobic003G039800 Sobic003G395800 Sobic003G395800 Sobic008G040800--Sobic003G395800 Sobic002G153600 Sobic002G153600 Sobic008G040800--Sobic002G153600 Sobic007G127200 Sobic007G127200 Sobic008G040800--Sobic007G127200 Sobic003G076100 Sobic003G076100 Sobic007G159300--Sobic003G076100 Sobic006G163033 Sobic006G163033 Sobic007G159300--Sobic006G163033 Sobic007G159300--Sobic006G205800 Sobic006G174000 Sobic006G174000 Sobic007G159300--Sobic006G174000 Sobic006G252532 Sobic006G252532 Sobic007G159300--Sobic006G252532 Sobic007G122866 Sobic007G122866 Sobic007G159300--Sobic007G122866 Sobic007G159300--Sobic001G501701 Sobic004G271100 Sobic004G271100 Sobic007G159300--Sobic004G271100 Sobic004G279900 Sobic004G279900 Sobic007G159300--Sobic004G279900 Sobic002G215866--Sobic004G279900 Sobic003G008200 Sobic003G008200 Sobic002G215866--Sobic003G008200 Sobic008G123700 Sobic008G123700 Sobic002G215866--Sobic008G123700 Sobic004G208201 Sobic004G208201 Sobic002G215866--Sobic004G208201 Sobic002G215866--Sobic006G205800 Sobic004G233100 Sobic004G233100 Sobic002G215866--Sobic004G233100 Sobic009G206900 Sobic009G206900 Sobic002G215866--Sobic009G206900 Sobic004G061100 Sobic004G061100 Sobic002G215866--Sobic004G061100 Sobic001G476201 Sobic001G476201 Sobic002G215866--Sobic001G476201
Octagon: transcription factors


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