Gene annotation
Transcriptome id Sobic.007G159300.1
Synonym ATAIG1, TMO5, BHLH32, Sb07g023280
Functional annotation basic helix-loop-helix, putative, expressed
UniProt C5YMN0
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF176
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G25710 : basic helix-loop-helix 32
RAP-DB (Rice) LOC_Os08g37290.1 : basic helix-loop-helix, putative, expressed
MaizeGDB (Corn) Zm00025a014096 , Zm00025a005457
Brachypodium KQJ98671
Barley -
Wheat TraesCS2D02G472000 , TraesCS2A02G472300 , TraesCS5B02G243000 , TraesCS2B02G494900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G076100 limonoid UDP-glucosyltransferase, putative, expressed -
2 Sobic.006G163033 - -
3 Sobic.006G205800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
4 Sobic.006G174000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
5 Sobic.006G252532 - -
6 Sobic.007G122866 - -
7 Sobic.001G501701 - -
8 Sobic.004G271100 expressed protein -
9 Sobic.004G279900 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
10 Sobic.003G039800 expressed protein -
11 Sobic.010G043350 - -
12 Sobic.007G138600 no apical meristem protein, putative, expressed -
13 Sobic.001G097800 - -
14 Sobic.007G099700 - -
15 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
16 Sobic.K004201 - -
17 Sobic.006G115532 - -
18 Sobic.005G198150 - -
19 Sobic.009G240100 receptor-like protein kinase homolog RK20-1, putative, expressed -
20 Sobic.006G112000 expressed protein -


Gene co-expression network
sample Sobic007G159300 Sobic007G159300 Sobic003G076100 Sobic003G076100 Sobic007G159300--Sobic003G076100 Sobic006G163033 Sobic006G163033 Sobic007G159300--Sobic006G163033 Sobic006G205800 Sobic006G205800 Sobic007G159300--Sobic006G205800 Sobic006G174000 Sobic006G174000 Sobic007G159300--Sobic006G174000 Sobic006G252532 Sobic006G252532 Sobic007G159300--Sobic006G252532 Sobic007G122866 Sobic007G122866 Sobic007G159300--Sobic007G122866 Sobic001G501701 Sobic001G501701 Sobic007G159300--Sobic001G501701 Sobic004G271100 Sobic004G271100 Sobic007G159300--Sobic004G271100 Sobic004G279900 Sobic004G279900 Sobic007G159300--Sobic004G279900 Sobic003G076100--Sobic007G122866 Sobic003G076100--Sobic007G159300 Sobic001G052500 Sobic001G052500 Sobic003G076100--Sobic001G052500 Sobic003G076100--Sobic004G271100 Sobic003G076100--Sobic006G163033 Sobic005G103800 Sobic005G103800 Sobic003G076100--Sobic005G103800 Sobic001G206600 Sobic001G206600 Sobic003G076100--Sobic001G206600 Sobic003G277850 Sobic003G277850 Sobic003G076100--Sobic003G277850 Sobic003G225000 Sobic003G225000 Sobic003G076100--Sobic003G225000 Sobic003G223600 Sobic003G223600 Sobic006G163033--Sobic003G223600 Sobic006G163033--Sobic007G159300 Sobic006G163033--Sobic004G279900 Sobic006G163033--Sobic006G174000 Sobic007G079500 Sobic007G079500 Sobic006G163033--Sobic007G079500 Sobic006G163033--Sobic007G122866 Sobic004G093300 Sobic004G093300 Sobic006G163033--Sobic004G093300 Sobic006G163033--Sobic006G205800 Sobic006G209200 Sobic006G209200 Sobic006G163033--Sobic006G209200 Sobic001G207301 Sobic001G207301 Sobic006G205800--Sobic001G207301 Sobic006G112000 Sobic006G112000 Sobic006G205800--Sobic006G112000 Sobic003G314200 Sobic003G314200 Sobic006G205800--Sobic003G314200 Sobic003G348900 Sobic003G348900 Sobic006G205800--Sobic003G348900 Sobic001G097800 Sobic001G097800 Sobic006G205800--Sobic001G097800 Sobic006G094800 Sobic006G094800 Sobic006G205800--Sobic006G094800 Sobic008G040800 Sobic008G040800 Sobic006G205800--Sobic008G040800 Sobic006G205800--Sobic007G159300 Sobic002G215866 Sobic002G215866 Sobic006G205800--Sobic002G215866 Sobic007G099700 Sobic007G099700 Sobic006G174000--Sobic007G099700 Sobic006G174000--Sobic006G163033 Sobic006G174000--Sobic007G159300 Sobic006G174000--Sobic006G205800 Sobic006G174000--Sobic004G279900 Sobic009G248200 Sobic009G248200 Sobic006G174000--Sobic009G248200 Sobic006G174000--Sobic003G277850 Sobic006G174000--Sobic004G093300 Sobic005G019000 Sobic005G019000 Sobic006G174000--Sobic005G019000 Sobic007G047200 Sobic007G047200 Sobic006G252532--Sobic007G047200 Sobic003G380700 Sobic003G380700 Sobic006G252532--Sobic003G380700 Sobic009G240100 Sobic009G240100 Sobic006G252532--Sobic009G240100 Sobic008G110151 Sobic008G110151 Sobic006G252532--Sobic008G110151 Sobic006G130700 Sobic006G130700 Sobic006G252532--Sobic006G130700 Sobic003G188700 Sobic003G188700 Sobic006G252532--Sobic003G188700 Sobic003G199650 Sobic003G199650 Sobic006G252532--Sobic003G199650 Sobic010G043350 Sobic010G043350 Sobic006G252532--Sobic010G043350 Sobic006G252532--Sobic004G279900 Sobic007G122866--Sobic001G052500 Sobic007G122866--Sobic003G076100 Sobic003G043550 Sobic003G043550 Sobic007G122866--Sobic003G043550 Sobic007G122866--Sobic004G279900 Sobic007G122866--Sobic006G163033 Sobic001G194401 Sobic001G194401 Sobic007G122866--Sobic001G194401 Sobic007G122866--Sobic003G277850 Sobic006G253700 Sobic006G253700 Sobic007G122866--Sobic006G253700 Sobic004G195500 Sobic004G195500 Sobic007G122866--Sobic004G195500 Sobic001G501701--Sobic001G097800 Sobic003G396050 Sobic003G396050 Sobic001G501701--Sobic003G396050 Sobic009G200632 Sobic009G200632 Sobic001G501701--Sobic009G200632 Sobic001G499400 Sobic001G499400 Sobic001G501701--Sobic001G499400 Sobic003G039800 Sobic003G039800 Sobic001G501701--Sobic003G039800 Sobic001G501701--Sobic006G205800 Sobic001G501701--Sobic003G314200 Sobic006G192150 Sobic006G192150 Sobic001G501701--Sobic006G192150 Sobic007G138600 Sobic007G138600 Sobic001G501701--Sobic007G138600 Sobic004G271100--Sobic003G076100 Sobic004G271100--Sobic007G122866 Sobic004G271100--Sobic006G163033 Sobic004G271100--Sobic007G159300 Sobic008G028900 Sobic008G028900 Sobic004G271100--Sobic008G028900 Sobic004G271100--Sobic006G252532 Sobic003G427400 Sobic003G427400 Sobic004G271100--Sobic003G427400 Sobic004G271100--Sobic003G225000 Sobic002G204800 Sobic002G204800 Sobic004G271100--Sobic002G204800 Sobic001G476201 Sobic001G476201 Sobic004G279900--Sobic001G476201 Sobic001G013701 Sobic001G013701 Sobic004G279900--Sobic001G013701 Sobic001G383600 Sobic001G383600 Sobic004G279900--Sobic001G383600 Sobic004G279900--Sobic004G093300 Sobic004G279900--Sobic003G223600 Sobic003G095301 Sobic003G095301 Sobic004G279900--Sobic003G095301 Sobic004G279900--Sobic006G209200 Sobic005G120466 Sobic005G120466 Sobic004G279900--Sobic005G120466 Sobic003G294550 Sobic003G294550 Sobic004G279900--Sobic003G294550
Octagon: transcription factors


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