Gene annotation
Transcriptome id Sobic.007G122866.1
Synonym -
Functional annotation -
UniProt A0A1Z5RAE0
Pfam -
Panther DB PTHR33098 PTHR33098:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
2 Sobic.003G076100 limonoid UDP-glucosyltransferase, putative, expressed -
3 Sobic.003G043550 - -
4 Sobic.004G279900 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
5 Sobic.006G163033 - -
6 Sobic.001G194401 - -
7 Sobic.003G277850 - -
8 Sobic.006G253700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR23 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
9 Sobic.004G195500 heavy metal associated domain containing protein, expressed -
10 Sobic.002G242100 expressed protein -
11 Sobic.007G159300 basic helix-loop-helix, putative, expressed -
12 Sobic.003G383400 ZOS1-19 - C2H2 zinc finger protein, expressed -
13 Sobic.004G271100 expressed protein -
14 Sobic.007G079500 hypothetical protein -
15 Sobic.001G206600 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
16 Sobic.003G225000 OsFBX26 - F-box domain containing protein, expressed -
17 Sobic.006G209200 transferase family domain containing protein, expressed -
18 Sobic.002G363466 - -
19 Sobic.003G123800 expressed protein -
20 Sobic.003G079466 - -


Gene co-expression network
sample Sobic007G122866 Sobic007G122866 Sobic001G052500 Sobic001G052500 Sobic007G122866--Sobic001G052500 Sobic003G076100 Sobic003G076100 Sobic007G122866--Sobic003G076100 Sobic003G043550 Sobic003G043550 Sobic007G122866--Sobic003G043550 Sobic004G279900 Sobic004G279900 Sobic007G122866--Sobic004G279900 Sobic006G163033 Sobic006G163033 Sobic007G122866--Sobic006G163033 Sobic001G194401 Sobic001G194401 Sobic007G122866--Sobic001G194401 Sobic003G277850 Sobic003G277850 Sobic007G122866--Sobic003G277850 Sobic006G253700 Sobic006G253700 Sobic007G122866--Sobic006G253700 Sobic004G195500 Sobic004G195500 Sobic007G122866--Sobic004G195500 Sobic001G052500--Sobic007G122866 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic010G072200 Sobic010G072200 Sobic001G052500--Sobic010G072200 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic008G050500 Sobic008G050500 Sobic001G052500--Sobic008G050500 Sobic003G085750 Sobic003G085750 Sobic001G052500--Sobic003G085750 Sobic006G252532 Sobic006G252532 Sobic001G052500--Sobic006G252532 Sobic003G076100--Sobic007G122866 Sobic007G159300 Sobic007G159300 Sobic003G076100--Sobic007G159300 Sobic003G076100--Sobic001G052500 Sobic004G271100 Sobic004G271100 Sobic003G076100--Sobic004G271100 Sobic003G076100--Sobic006G163033 Sobic005G103800 Sobic005G103800 Sobic003G076100--Sobic005G103800 Sobic001G206600 Sobic001G206600 Sobic003G076100--Sobic001G206600 Sobic003G076100--Sobic003G277850 Sobic003G225000 Sobic003G225000 Sobic003G076100--Sobic003G225000 Sobic003G043550--Sobic007G122866 Sobic003G043550--Sobic006G253700 Sobic002G286566 Sobic002G286566 Sobic003G043550--Sobic002G286566 Sobic001G318800 Sobic001G318800 Sobic003G043550--Sobic001G318800 Sobic002G391501 Sobic002G391501 Sobic003G043550--Sobic002G391501 Sobic003G383400 Sobic003G383400 Sobic003G043550--Sobic003G383400 Sobic003G299100 Sobic003G299100 Sobic003G043550--Sobic003G299100 Sobic010G030600 Sobic010G030600 Sobic003G043550--Sobic010G030600 Sobic002G363466 Sobic002G363466 Sobic003G043550--Sobic002G363466 Sobic001G476201 Sobic001G476201 Sobic004G279900--Sobic001G476201 Sobic001G013701 Sobic001G013701 Sobic004G279900--Sobic001G013701 Sobic001G383600 Sobic001G383600 Sobic004G279900--Sobic001G383600 Sobic004G093300 Sobic004G093300 Sobic004G279900--Sobic004G093300 Sobic003G223600 Sobic003G223600 Sobic004G279900--Sobic003G223600 Sobic003G095301 Sobic003G095301 Sobic004G279900--Sobic003G095301 Sobic006G209200 Sobic006G209200 Sobic004G279900--Sobic006G209200 Sobic005G120466 Sobic005G120466 Sobic004G279900--Sobic005G120466 Sobic003G294550 Sobic003G294550 Sobic004G279900--Sobic003G294550 Sobic006G163033--Sobic003G223600 Sobic006G163033--Sobic007G159300 Sobic006G163033--Sobic004G279900 Sobic006G174000 Sobic006G174000 Sobic006G163033--Sobic006G174000 Sobic007G079500 Sobic007G079500 Sobic006G163033--Sobic007G079500 Sobic006G163033--Sobic007G122866 Sobic006G163033--Sobic004G093300 Sobic006G205800 Sobic006G205800 Sobic006G163033--Sobic006G205800 Sobic006G163033--Sobic006G209200 Sobic001G194401--Sobic007G122866 Sobic001G194401--Sobic001G052500 Sobic002G117300 Sobic002G117300 Sobic001G194401--Sobic002G117300 Sobic002G242100 Sobic002G242100 Sobic001G194401--Sobic002G242100 Sobic001G185450 Sobic001G185450 Sobic001G194401--Sobic001G185450 Sobic001G194401--Sobic004G195500 Sobic001G194401--Sobic003G076100 Sobic007G074200 Sobic007G074200 Sobic001G194401--Sobic007G074200 Sobic002G192000 Sobic002G192000 Sobic001G194401--Sobic002G192000 Sobic003G123800 Sobic003G123800 Sobic003G277850--Sobic003G123800 Sobic003G277850--Sobic004G093300 Sobic009G005000 Sobic009G005000 Sobic003G277850--Sobic009G005000 Sobic003G277850--Sobic006G209200 Sobic001G173251 Sobic001G173251 Sobic003G277850--Sobic001G173251 Sobic003G277850--Sobic007G079500 Sobic004G022700 Sobic004G022700 Sobic003G277850--Sobic004G022700 Sobic005G144900 Sobic005G144900 Sobic003G277850--Sobic005G144900 Sobic006G175100 Sobic006G175100 Sobic003G277850--Sobic006G175100 Sobic006G253700--Sobic003G043550 Sobic002G248201 Sobic002G248201 Sobic006G253700--Sobic002G248201 Sobic006G253700--Sobic007G122866 Sobic006G253700--Sobic003G085750 Sobic006G253700--Sobic001G052500 Sobic003G252750 Sobic003G252750 Sobic006G253700--Sobic003G252750 Sobic007G085600 Sobic007G085600 Sobic006G253700--Sobic007G085600 Sobic006G253700--Sobic010G072200 Sobic001G105900 Sobic001G105900 Sobic006G253700--Sobic001G105900 Sobic004G195500--Sobic007G122866 Sobic003G269000 Sobic003G269000 Sobic004G195500--Sobic003G269000 Sobic004G195500--Sobic001G206600 Sobic003G073380 Sobic003G073380 Sobic004G195500--Sobic003G073380 Sobic007G148500 Sobic007G148500 Sobic004G195500--Sobic007G148500 Sobic009G205500 Sobic009G205500 Sobic004G195500--Sobic009G205500 Sobic004G195500--Sobic003G043550 Sobic002G012400 Sobic002G012400 Sobic004G195500--Sobic002G012400 Sobic004G195500--Sobic003G299100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.