Gene annotation
Transcriptome id Sobic.006G253700.1
Synonym Sb06g031770, SbSAUR50, small auxin up RNA
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR23 - Auxin-responsive SAUR gene family member, expressed
UniProt C5Y9X6
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF12
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT4G34750 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os04g56690.1 : OsSAUR23 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a009428
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G043550 - -
2 Sobic.002G248201 - -
3 Sobic.007G122866 - -
4 Sobic.003G085750 - -
5 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
6 Sobic.003G252750 - -
7 Sobic.007G085600 glycosyl hydrolases family 16, putative, expressed -
8 Sobic.010G072200 Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
9 Sobic.001G105900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
10 Sobic.001G279350 - -
11 Sobic.005G013400 WRKY52, expressed -
12 Sobic.009G032566 - -
13 Sobic.002G383050 - -
14 Sobic.003G348500 pectate lyase 4 precursor, putative, expressed K01728: pectate lyase
15 Sobic.010G082201 - K13681: xyloglucan fucosyltransferase
16 Sobic.001G206600 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
17 Sobic.002G245200 beta-expansin precursor, putative, expressed -
18 Sobic.009G141500 Not investigated(PubMedID : 23766026)@"SERF1(Ortholog in rice:Schmidt et al., 2013)"(PubMedID : 31659925)@ethylene-responsive transcription factor ERF020, putative, expressed -
19 Sobic.002G291900 RING-H2 finger protein, putative, expressed -
20 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -


Gene co-expression network
sample Sobic006G253700 Sobic006G253700 Sobic003G043550 Sobic003G043550 Sobic006G253700--Sobic003G043550 Sobic002G248201 Sobic002G248201 Sobic006G253700--Sobic002G248201 Sobic007G122866 Sobic007G122866 Sobic006G253700--Sobic007G122866 Sobic003G085750 Sobic003G085750 Sobic006G253700--Sobic003G085750 Sobic001G052500 Sobic001G052500 Sobic006G253700--Sobic001G052500 Sobic003G252750 Sobic003G252750 Sobic006G253700--Sobic003G252750 Sobic007G085600 Sobic007G085600 Sobic006G253700--Sobic007G085600 Sobic010G072200 Sobic010G072200 Sobic006G253700--Sobic010G072200 Sobic001G105900 Sobic001G105900 Sobic006G253700--Sobic001G105900 Sobic003G043550--Sobic007G122866 Sobic003G043550--Sobic006G253700 Sobic002G286566 Sobic002G286566 Sobic003G043550--Sobic002G286566 Sobic001G318800 Sobic001G318800 Sobic003G043550--Sobic001G318800 Sobic002G391501 Sobic002G391501 Sobic003G043550--Sobic002G391501 Sobic003G383400 Sobic003G383400 Sobic003G043550--Sobic003G383400 Sobic003G299100 Sobic003G299100 Sobic003G043550--Sobic003G299100 Sobic010G030600 Sobic010G030600 Sobic003G043550--Sobic010G030600 Sobic002G363466 Sobic002G363466 Sobic003G043550--Sobic002G363466 Sobic006G190500 Sobic006G190500 Sobic002G248201--Sobic006G190500 Sobic008G050500 Sobic008G050500 Sobic002G248201--Sobic008G050500 Sobic001G430600 Sobic001G430600 Sobic002G248201--Sobic001G430600 Sobic006G190100 Sobic006G190100 Sobic002G248201--Sobic006G190100 Sobic002G248201--Sobic006G253700 Sobic009G111200 Sobic009G111200 Sobic002G248201--Sobic009G111200 Sobic007G213800 Sobic007G213800 Sobic002G248201--Sobic007G213800 Sobic004G286600 Sobic004G286600 Sobic002G248201--Sobic004G286600 Sobic003G313800 Sobic003G313800 Sobic002G248201--Sobic003G313800 Sobic007G122866--Sobic001G052500 Sobic003G076100 Sobic003G076100 Sobic007G122866--Sobic003G076100 Sobic007G122866--Sobic003G043550 Sobic004G279900 Sobic004G279900 Sobic007G122866--Sobic004G279900 Sobic006G163033 Sobic006G163033 Sobic007G122866--Sobic006G163033 Sobic001G194401 Sobic001G194401 Sobic007G122866--Sobic001G194401 Sobic003G277850 Sobic003G277850 Sobic007G122866--Sobic003G277850 Sobic007G122866--Sobic006G253700 Sobic004G195500 Sobic004G195500 Sobic007G122866--Sobic004G195500 Sobic001G279350 Sobic001G279350 Sobic003G085750--Sobic001G279350 Sobic001G481300 Sobic001G481300 Sobic003G085750--Sobic001G481300 Sobic003G355100 Sobic003G355100 Sobic003G085750--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic003G085750--Sobic007G214600 Sobic007G214400 Sobic007G214400 Sobic003G085750--Sobic007G214400 Sobic001G371800 Sobic001G371800 Sobic003G085750--Sobic001G371800 Sobic004G109600 Sobic004G109600 Sobic003G085750--Sobic004G109600 Sobic003G394400 Sobic003G394400 Sobic003G085750--Sobic003G394400 Sobic009G169000 Sobic009G169000 Sobic003G085750--Sobic009G169000 Sobic001G052500--Sobic007G122866 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic001G052500--Sobic010G072200 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic001G052500--Sobic008G050500 Sobic001G052500--Sobic003G085750 Sobic006G252532 Sobic006G252532 Sobic001G052500--Sobic006G252532 Sobic010G092550 Sobic010G092550 Sobic003G252750--Sobic010G092550 Sobic003G252750--Sobic002G363466 Sobic002G417101 Sobic002G417101 Sobic003G252750--Sobic002G417101 Sobic003G095750 Sobic003G095750 Sobic003G252750--Sobic003G095750 Sobic001G020900 Sobic001G020900 Sobic003G252750--Sobic001G020900 Sobic003G095301 Sobic003G095301 Sobic003G252750--Sobic003G095301 Sobic005G068600 Sobic005G068600 Sobic003G252750--Sobic005G068600 Sobic004G121500 Sobic004G121500 Sobic003G252750--Sobic004G121500 Sobic002G400050 Sobic002G400050 Sobic003G252750--Sobic002G400050 Sobic007G085600--Sobic010G072200 Sobic007G085600--Sobic003G085750 Sobic010G103600 Sobic010G103600 Sobic007G085600--Sobic010G103600 Sobic003G139333 Sobic003G139333 Sobic007G085600--Sobic003G139333 Sobic001G481500 Sobic001G481500 Sobic007G085600--Sobic001G481500 Sobic002G245200 Sobic002G245200 Sobic007G085600--Sobic002G245200 Sobic007G085600--Sobic001G279350 Sobic007G085600--Sobic006G253700 Sobic007G085600--Sobic003G394400 Sobic010G072200--Sobic007G085600 Sobic010G072200--Sobic010G103600 Sobic010G072200--Sobic001G052500 Sobic010G072200--Sobic003G085750 Sobic010G072200--Sobic003G139333 Sobic001G419100 Sobic001G419100 Sobic010G072200--Sobic001G419100 Sobic005G202400 Sobic005G202400 Sobic010G072200--Sobic005G202400 Sobic010G072200--Sobic006G253700 Sobic001G183800 Sobic001G183800 Sobic010G072200--Sobic001G183800 Sobic007G147700 Sobic007G147700 Sobic001G105900--Sobic007G147700 Sobic001G443800 Sobic001G443800 Sobic001G105900--Sobic001G443800 Sobic003G197200 Sobic003G197200 Sobic001G105900--Sobic003G197200 Sobic002G291900 Sobic002G291900 Sobic001G105900--Sobic002G291900 Sobic001G190100 Sobic001G190100 Sobic001G105900--Sobic001G190100 Sobic001G201200 Sobic001G201200 Sobic001G105900--Sobic001G201200 Sobic010G198500 Sobic010G198500 Sobic001G105900--Sobic010G198500 Sobic003G148600 Sobic003G148600 Sobic001G105900--Sobic003G148600 Sobic009G148100 Sobic009G148100 Sobic001G105900--Sobic009G148100
Octagon: transcription factors


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