Gene annotation
Transcriptome id Sobic.003G043550.1,Sobic.003G043550.2
Synonym -
Functional annotation -
UniProt A0A1W0VVR5 , A0A1W0VVT4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G122866 - -
2 Sobic.006G253700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR23 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
3 Sobic.002G286566 - -
4 Sobic.001G318800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.002G391501 - K00430: peroxidase
6 Sobic.003G383400 ZOS1-19 - C2H2 zinc finger protein, expressed -
7 Sobic.003G299100 expressed protein -
8 Sobic.010G030600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
9 Sobic.002G363466 - -
10 Sobic.003G252750 - -
11 Sobic.004G195500 heavy metal associated domain containing protein, expressed -
12 Sobic.005G013400 WRKY52, expressed -
13 Sobic.003G076100 limonoid UDP-glucosyltransferase, putative, expressed -
14 Sobic.010G203800 cytochrome P450, putative, expressed -
15 Sobic.009G201400 glycosyl hydrolases family 17, putative, expressed -
16 Sobic.001G206600 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
17 Sobic.001G026950 - -
18 Sobic.007G079500 hypothetical protein -
19 Sobic.004G020500 expressed protein -
20 Sobic.007G148500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic003G043550 Sobic003G043550 Sobic007G122866 Sobic007G122866 Sobic003G043550--Sobic007G122866 Sobic006G253700 Sobic006G253700 Sobic003G043550--Sobic006G253700 Sobic002G286566 Sobic002G286566 Sobic003G043550--Sobic002G286566 Sobic001G318800 Sobic001G318800 Sobic003G043550--Sobic001G318800 Sobic002G391501 Sobic002G391501 Sobic003G043550--Sobic002G391501 Sobic003G383400 Sobic003G383400 Sobic003G043550--Sobic003G383400 Sobic003G299100 Sobic003G299100 Sobic003G043550--Sobic003G299100 Sobic010G030600 Sobic010G030600 Sobic003G043550--Sobic010G030600 Sobic002G363466 Sobic002G363466 Sobic003G043550--Sobic002G363466 Sobic001G052500 Sobic001G052500 Sobic007G122866--Sobic001G052500 Sobic003G076100 Sobic003G076100 Sobic007G122866--Sobic003G076100 Sobic007G122866--Sobic003G043550 Sobic004G279900 Sobic004G279900 Sobic007G122866--Sobic004G279900 Sobic006G163033 Sobic006G163033 Sobic007G122866--Sobic006G163033 Sobic001G194401 Sobic001G194401 Sobic007G122866--Sobic001G194401 Sobic003G277850 Sobic003G277850 Sobic007G122866--Sobic003G277850 Sobic007G122866--Sobic006G253700 Sobic004G195500 Sobic004G195500 Sobic007G122866--Sobic004G195500 Sobic006G253700--Sobic003G043550 Sobic002G248201 Sobic002G248201 Sobic006G253700--Sobic002G248201 Sobic006G253700--Sobic007G122866 Sobic003G085750 Sobic003G085750 Sobic006G253700--Sobic003G085750 Sobic006G253700--Sobic001G052500 Sobic003G252750 Sobic003G252750 Sobic006G253700--Sobic003G252750 Sobic007G085600 Sobic007G085600 Sobic006G253700--Sobic007G085600 Sobic010G072200 Sobic010G072200 Sobic006G253700--Sobic010G072200 Sobic001G105900 Sobic001G105900 Sobic006G253700--Sobic001G105900 Sobic004G148400 Sobic004G148400 Sobic002G286566--Sobic004G148400 Sobic002G286566--Sobic003G299100 Sobic002G286566--Sobic003G043550 Sobic009G116600 Sobic009G116600 Sobic002G286566--Sobic009G116600 Sobic001G499701 Sobic001G499701 Sobic002G286566--Sobic001G499701 Sobic006G096000 Sobic006G096000 Sobic002G286566--Sobic006G096000 Sobic002G356500 Sobic002G356500 Sobic002G286566--Sobic002G356500 Sobic008G177400 Sobic008G177400 Sobic002G286566--Sobic008G177400 Sobic007G085500 Sobic007G085500 Sobic002G286566--Sobic007G085500 Sobic001G318800--Sobic003G043550 Sobic001G318800--Sobic007G122866 Sobic001G318800--Sobic003G383400 Sobic001G318800--Sobic006G253700 Sobic001G318800--Sobic003G299100 Sobic001G318800--Sobic002G363466 Sobic001G318800--Sobic003G252750 Sobic004G314200 Sobic004G314200 Sobic001G318800--Sobic004G314200 Sobic005G068600 Sobic005G068600 Sobic001G318800--Sobic005G068600 Sobic010G203800 Sobic010G203800 Sobic002G391501--Sobic010G203800 Sobic001G026950 Sobic001G026950 Sobic002G391501--Sobic001G026950 Sobic008G141501 Sobic008G141501 Sobic002G391501--Sobic008G141501 Sobic010G101350 Sobic010G101350 Sobic002G391501--Sobic010G101350 Sobic002G069700 Sobic002G069700 Sobic002G391501--Sobic002G069700 Sobic002G391501--Sobic003G043550 Sobic003G029350 Sobic003G029350 Sobic002G391501--Sobic003G029350 Sobic004G177050 Sobic004G177050 Sobic002G391501--Sobic004G177050 Sobic001G206600 Sobic001G206600 Sobic002G391501--Sobic001G206600 Sobic003G383400--Sobic007G122866 Sobic003G383400--Sobic003G299100 Sobic003G383400--Sobic003G252750 Sobic003G383400--Sobic005G068600 Sobic003G383400--Sobic003G043550 Sobic002G242100 Sobic002G242100 Sobic003G383400--Sobic002G242100 Sobic003G383400--Sobic002G363466 Sobic001G020900 Sobic001G020900 Sobic003G383400--Sobic001G020900 Sobic008G035000 Sobic008G035000 Sobic003G383400--Sobic008G035000 Sobic002G154900 Sobic002G154900 Sobic003G299100--Sobic002G154900 Sobic003G299100--Sobic002G286566 Sobic007G054900 Sobic007G054900 Sobic003G299100--Sobic007G054900 Sobic004G292600 Sobic004G292600 Sobic003G299100--Sobic004G292600 Sobic010G156400 Sobic010G156400 Sobic003G299100--Sobic010G156400 Sobic008G184700 Sobic008G184700 Sobic003G299100--Sobic008G184700 Sobic005G011900 Sobic005G011900 Sobic003G299100--Sobic005G011900 Sobic003G299100--Sobic009G116600 Sobic005G203700 Sobic005G203700 Sobic003G299100--Sobic005G203700 Sobic001G234800 Sobic001G234800 Sobic010G030600--Sobic001G234800 Sobic010G030600--Sobic002G242100 Sobic010G030600--Sobic003G043550 Sobic001G044400 Sobic001G044400 Sobic010G030600--Sobic001G044400 Sobic010G030600--Sobic007G122866 Sobic009G069700 Sobic009G069700 Sobic010G030600--Sobic009G069700 Sobic001G225200 Sobic001G225200 Sobic010G030600--Sobic001G225200 Sobic001G225300 Sobic001G225300 Sobic010G030600--Sobic001G225300 Sobic009G200566 Sobic009G200566 Sobic010G030600--Sobic009G200566 Sobic006G209200 Sobic006G209200 Sobic002G363466--Sobic006G209200 Sobic001G173251 Sobic001G173251 Sobic002G363466--Sobic001G173251 Sobic003G095301 Sobic003G095301 Sobic002G363466--Sobic003G095301 Sobic004G093300 Sobic004G093300 Sobic002G363466--Sobic004G093300 Sobic010G092550 Sobic010G092550 Sobic002G363466--Sobic010G092550 Sobic009G158200 Sobic009G158200 Sobic002G363466--Sobic009G158200 Sobic002G175000 Sobic002G175000 Sobic002G363466--Sobic002G175000 Sobic004G121500 Sobic004G121500 Sobic002G363466--Sobic004G121500 Sobic007G181801 Sobic007G181801 Sobic002G363466--Sobic007G181801
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.