Gene annotation
Transcriptome id Sobic.009G201400.1
Synonym Sb09g025890
Functional annotation glycosyl hydrolases family 17, putative, expressed
UniProt A0A1Z5R3J8
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF94
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G16260 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g71820.1 : glycosyl hydrolases family 17, putative, expressed
MaizeGDB (Corn) Zm00025a034730
Brachypodium KQK11472 , KQK11473 , KQK08651 , KQK11471 , KQK11495 , KQK05606
Barley HORVU3Hr1G111160.3 , HORVU3Hr1G111160.2 , HORVU3Hr1G111160.1 , HORVU3Hr1G111160.7 , HORVU3Hr1G111160.5 , HORVU3Hr1G111160.4 , HORVU3Hr1G111160.8 , HORVU3Hr1G078520.1 , HORVU3Hr1G078520.3 , HORVU3Hr1G078520.2 , HORVU1Hr1G067460.6 , HORVU1Hr1G067460.4 , HORVU1Hr1G067460.5 , HORVU1Hr1G067460.2 , HORVU1Hr1G067460.3 , HORVU1Hr1G067460.1 , HORVU3Hr1G105790.9 , HORVU3Hr1G105790.6 , HORVU3Hr1G111160.11 , HORVU7Hr1G051310.3 , HORVU7Hr1G051310.2 , HORVU7Hr1G051310.1 , HORVU3Hr1G105790.11 , HORVU3Hr1G105790.10 , HORVU3Hr1G105420.3 , HORVU3Hr1G105420.2 , HORVU3Hr1G105420.1
Wheat TraesCS3B02G526600 , TraesCS3D02G478800 , TraesCS3B02G525000 , TraesCS3A02G330500 , TraesCS3A02G481600 , TraesCS3A02G481600 , TraesCS3B02G571400 , TraesCS3D02G477300 , TraesCS1A02G312700 , TraesCS1A02G312700 , TraesCS1D02G312800 , TraesCS1D02G312800 , TraesCS3B02G526600 , TraesCS3D02G475200 , TraesCS3D02G512300 , TraesCS1B02G324300 , TraesCS1B02G324300 , TraesCS3A02G482200 , TraesCS3A02G483800 , TraesCS3D02G478900 , TraesCS3A02G483700 , TraesCS3B02G530500 , TraesCS3B02G530600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G205500 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.005G013400 WRKY52, expressed -
3 Sobic.004G229400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
4 Sobic.007G148500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
5 Sobic.005G180500 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.005G013500 WRKY52, expressed -
7 Sobic.009G183900 ICE-like protease p20 domain containing protein, putative, expressed -
8 Sobic.001G434800 MYB-like transcription factor DIVARICATA, putative, expressed -
9 Sobic.006G277500 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.001G382900 HAD superfamily phosphatase, putative, expressed -
11 Sobic.010G135100 expressed protein -
12 Sobic.006G277800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.005G110406 - K16223: protein FLOWERING LOCUS T
14 Sobic.009G052800 helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.004G295600 AP2 domain containing protein, expressed -
16 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
17 Sobic.007G164400 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
18 Sobic.002G351300 expressed protein -
19 Sobic.010G211400 OsRCI2-9 - Putative low temperature and salt responsive protein, expressed -
20 Sobic.008G077550 - -


Gene co-expression network
sample Sobic009G201400 Sobic009G201400 Sobic009G205500 Sobic009G205500 Sobic009G201400--Sobic009G205500 Sobic005G013400 Sobic005G013400 Sobic009G201400--Sobic005G013400 Sobic004G229400 Sobic004G229400 Sobic009G201400--Sobic004G229400 Sobic007G148500 Sobic007G148500 Sobic009G201400--Sobic007G148500 Sobic005G180500 Sobic005G180500 Sobic009G201400--Sobic005G180500 Sobic005G013500 Sobic005G013500 Sobic009G201400--Sobic005G013500 Sobic009G183900 Sobic009G183900 Sobic009G201400--Sobic009G183900 Sobic001G434800 Sobic001G434800 Sobic009G201400--Sobic001G434800 Sobic006G277500 Sobic006G277500 Sobic009G201400--Sobic006G277500 Sobic003G427800 Sobic003G427800 Sobic009G205500--Sobic003G427800 Sobic008G158732 Sobic008G158732 Sobic009G205500--Sobic008G158732 Sobic009G205500--Sobic009G183900 Sobic002G184300 Sobic002G184300 Sobic009G205500--Sobic002G184300 Sobic009G205500--Sobic004G229400 Sobic009G205500--Sobic005G013500 Sobic004G229500 Sobic004G229500 Sobic009G205500--Sobic004G229500 Sobic002G351300 Sobic002G351300 Sobic009G205500--Sobic002G351300 Sobic009G032000 Sobic009G032000 Sobic009G205500--Sobic009G032000 Sobic005G013400--Sobic005G013500 Sobic001G206600 Sobic001G206600 Sobic005G013400--Sobic001G206600 Sobic004G246600 Sobic004G246600 Sobic005G013400--Sobic004G246600 Sobic005G013400--Sobic007G148500 Sobic005G013400--Sobic004G229500 Sobic003G370600 Sobic003G370600 Sobic005G013400--Sobic003G370600 Sobic009G123733 Sobic009G123733 Sobic005G013400--Sobic009G123733 Sobic001G143100 Sobic001G143100 Sobic005G013400--Sobic001G143100 Sobic003G060100 Sobic003G060100 Sobic005G013400--Sobic003G060100 Sobic004G229400--Sobic009G183900 Sobic002G234400 Sobic002G234400 Sobic004G229400--Sobic002G234400 Sobic004G229400--Sobic009G205500 Sobic007G058400 Sobic007G058400 Sobic004G229400--Sobic007G058400 Sobic004G229400--Sobic003G427800 Sobic004G229400--Sobic004G229500 Sobic010G064000 Sobic010G064000 Sobic004G229400--Sobic010G064000 Sobic004G229400--Sobic008G158732 Sobic004G229400--Sobic005G013500 Sobic007G148500--Sobic004G246600 Sobic001G311900 Sobic001G311900 Sobic007G148500--Sobic001G311900 Sobic007G148500--Sobic001G143100 Sobic007G148500--Sobic004G229500 Sobic007G148500--Sobic005G013500 Sobic007G148500--Sobic009G205500 Sobic007G122800 Sobic007G122800 Sobic007G148500--Sobic007G122800 Sobic002G269100 Sobic002G269100 Sobic007G148500--Sobic002G269100 Sobic007G148500--Sobic002G184300 Sobic008G077550 Sobic008G077550 Sobic005G180500--Sobic008G077550 Sobic002G238600 Sobic002G238600 Sobic005G180500--Sobic002G238600 Sobic010G135100 Sobic010G135100 Sobic005G180500--Sobic010G135100 Sobic004G295600 Sobic004G295600 Sobic005G180500--Sobic004G295600 Sobic005G180500--Sobic001G311900 Sobic005G180500--Sobic004G229500 Sobic002G390000 Sobic002G390000 Sobic005G180500--Sobic002G390000 Sobic005G180500--Sobic003G060100 Sobic005G180500--Sobic004G229400 Sobic005G013500--Sobic004G229500 Sobic005G013500--Sobic009G183900 Sobic005G013500--Sobic004G246600 Sobic005G013500--Sobic009G032000 Sobic009G144700 Sobic009G144700 Sobic005G013500--Sobic009G144700 Sobic004G097100 Sobic004G097100 Sobic005G013500--Sobic004G097100 Sobic001G363400 Sobic001G363400 Sobic005G013500--Sobic001G363400 Sobic004G294400 Sobic004G294400 Sobic005G013500--Sobic004G294400 Sobic004G108200 Sobic004G108200 Sobic005G013500--Sobic004G108200 Sobic009G183900--Sobic002G234400 Sobic009G183900--Sobic005G013500 Sobic009G183900--Sobic004G229400 Sobic009G183900--Sobic009G144700 Sobic009G183900--Sobic004G108200 Sobic009G183900--Sobic009G205500 Sobic009G183900--Sobic004G097100 Sobic009G183900--Sobic004G229500 Sobic002G388900 Sobic002G388900 Sobic009G183900--Sobic002G388900 Sobic004G297900 Sobic004G297900 Sobic001G434800--Sobic004G297900 Sobic007G164400 Sobic007G164400 Sobic001G434800--Sobic007G164400 Sobic001G434800--Sobic004G229400 Sobic001G261509 Sobic001G261509 Sobic001G434800--Sobic001G261509 Sobic006G089000 Sobic006G089000 Sobic001G434800--Sobic006G089000 Sobic002G261300 Sobic002G261300 Sobic001G434800--Sobic002G261300 Sobic008G009400 Sobic008G009400 Sobic001G434800--Sobic008G009400 Sobic006G172550 Sobic006G172550 Sobic001G434800--Sobic006G172550 Sobic001G382900 Sobic001G382900 Sobic001G434800--Sobic001G382900 Sobic006G277800 Sobic006G277800 Sobic006G277500--Sobic006G277800 Sobic006G277500--Sobic001G261509 Sobic008G068300 Sobic008G068300 Sobic006G277500--Sobic008G068300 Sobic004G299600 Sobic004G299600 Sobic006G277500--Sobic004G299600 Sobic005G110406 Sobic005G110406 Sobic006G277500--Sobic005G110406 Sobic007G090460 Sobic007G090460 Sobic006G277500--Sobic007G090460 Sobic005G222500 Sobic005G222500 Sobic006G277500--Sobic005G222500 Sobic001G502000 Sobic001G502000 Sobic006G277500--Sobic001G502000 Sobic002G183700 Sobic002G183700 Sobic006G277500--Sobic002G183700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.