Gene annotation
Transcriptome id Sobic.007G148500.1
Synonym SbERF82, ethylene response factor 82, Sb07g022265, ORA47
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt A0A1B6PHV7
Pfam PF00847
Panther DB PTHR31985 PTHR31985:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G19210 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os08g35240.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ98545
Barley HORVU3Hr1G026810.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G246600 expressed protein -
2 Sobic.001G311900 OsSCP47 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
3 Sobic.001G143100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
4 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
5 Sobic.005G013500 WRKY52, expressed -
6 Sobic.009G205500 harpin-induced protein 1 domain containing protein, expressed -
7 Sobic.007G122800 expressed protein -
8 Sobic.002G269100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
9 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
10 Sobic.002G358300 expressed protein -
11 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.004G308900 AP2 domain containing protein, expressed -
13 Sobic.004G064500 class I glutamine amidotransferase, putative, expressed -
14 Sobic.003G415000 DUF567 domain containing protein, putative, expressed -
15 Sobic.001G363400 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
16 Sobic.004G295600 AP2 domain containing protein, expressed -
17 Sobic.005G013400 WRKY52, expressed -
18 Sobic.003G269000 STE_MEKK_ste11_MAP3K.7 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
19 Sobic.004G097100 F-box family protein, putative, expressed -
20 Sobic.003G230100 expressed protein -


Gene co-expression network
sample Sobic007G148500 Sobic007G148500 Sobic004G246600 Sobic004G246600 Sobic007G148500--Sobic004G246600 Sobic001G311900 Sobic001G311900 Sobic007G148500--Sobic001G311900 Sobic001G143100 Sobic001G143100 Sobic007G148500--Sobic001G143100 Sobic004G229500 Sobic004G229500 Sobic007G148500--Sobic004G229500 Sobic005G013500 Sobic005G013500 Sobic007G148500--Sobic005G013500 Sobic009G205500 Sobic009G205500 Sobic007G148500--Sobic009G205500 Sobic007G122800 Sobic007G122800 Sobic007G148500--Sobic007G122800 Sobic002G269100 Sobic002G269100 Sobic007G148500--Sobic002G269100 Sobic002G184300 Sobic002G184300 Sobic007G148500--Sobic002G184300 Sobic004G246600--Sobic004G229500 Sobic009G032000 Sobic009G032000 Sobic004G246600--Sobic009G032000 Sobic004G308900 Sobic004G308900 Sobic004G246600--Sobic004G308900 Sobic004G246600--Sobic005G013500 Sobic002G358300 Sobic002G358300 Sobic004G246600--Sobic002G358300 Sobic004G097100 Sobic004G097100 Sobic004G246600--Sobic004G097100 Sobic004G246600--Sobic001G143100 Sobic004G246600--Sobic002G269100 Sobic004G246600--Sobic002G184300 Sobic001G311900--Sobic007G148500 Sobic004G295600 Sobic004G295600 Sobic001G311900--Sobic004G295600 Sobic001G311900--Sobic001G143100 Sobic005G180500 Sobic005G180500 Sobic001G311900--Sobic005G180500 Sobic001G311900--Sobic002G269100 Sobic001G211200 Sobic001G211200 Sobic001G311900--Sobic001G211200 Sobic001G311900--Sobic004G229500 Sobic001G363400 Sobic001G363400 Sobic001G311900--Sobic001G363400 Sobic001G311900--Sobic004G246600 Sobic001G143100--Sobic002G269100 Sobic001G143100--Sobic004G246600 Sobic001G143100--Sobic004G229500 Sobic001G143100--Sobic007G148500 Sobic001G143100--Sobic004G308900 Sobic001G143100--Sobic002G358300 Sobic001G143100--Sobic004G295600 Sobic001G143100--Sobic004G097100 Sobic001G143100--Sobic005G013500 Sobic004G229500--Sobic004G246600 Sobic004G229500--Sobic005G013500 Sobic004G229500--Sobic004G097100 Sobic003G427800 Sobic003G427800 Sobic004G229500--Sobic003G427800 Sobic004G229500--Sobic009G032000 Sobic004G229500--Sobic004G308900 Sobic009G183900 Sobic009G183900 Sobic004G229500--Sobic009G183900 Sobic004G229500--Sobic009G205500 Sobic004G229500--Sobic002G184300 Sobic005G013500--Sobic004G229500 Sobic005G013500--Sobic009G183900 Sobic005G013500--Sobic004G246600 Sobic005G013500--Sobic009G032000 Sobic009G144700 Sobic009G144700 Sobic005G013500--Sobic009G144700 Sobic005G013500--Sobic004G097100 Sobic005G013500--Sobic001G363400 Sobic004G294400 Sobic004G294400 Sobic005G013500--Sobic004G294400 Sobic004G108200 Sobic004G108200 Sobic005G013500--Sobic004G108200 Sobic009G205500--Sobic003G427800 Sobic008G158732 Sobic008G158732 Sobic009G205500--Sobic008G158732 Sobic009G205500--Sobic009G183900 Sobic009G205500--Sobic002G184300 Sobic004G229400 Sobic004G229400 Sobic009G205500--Sobic004G229400 Sobic009G205500--Sobic005G013500 Sobic009G205500--Sobic004G229500 Sobic002G351300 Sobic002G351300 Sobic009G205500--Sobic002G351300 Sobic009G205500--Sobic009G032000 Sobic007G122800--Sobic002G358300 Sobic007G122800--Sobic004G308900 Sobic004G191400 Sobic004G191400 Sobic007G122800--Sobic004G191400 Sobic007G122800--Sobic004G294400 Sobic004G191300 Sobic004G191300 Sobic007G122800--Sobic004G191300 Sobic001G195200 Sobic001G195200 Sobic007G122800--Sobic001G195200 Sobic006G007900 Sobic006G007900 Sobic007G122800--Sobic006G007900 Sobic009G122400 Sobic009G122400 Sobic007G122800--Sobic009G122400 Sobic003G268600 Sobic003G268600 Sobic007G122800--Sobic003G268600 Sobic002G269100--Sobic001G143100 Sobic002G269100--Sobic004G246600 Sobic002G269100--Sobic004G295600 Sobic002G269100--Sobic004G097100 Sobic002G269100--Sobic004G308900 Sobic002G269100--Sobic002G358300 Sobic009G194400 Sobic009G194400 Sobic002G269100--Sobic009G194400 Sobic002G269100--Sobic004G229500 Sobic006G187900 Sobic006G187900 Sobic002G269100--Sobic006G187900 Sobic002G184300--Sobic001G363400 Sobic003G230100 Sobic003G230100 Sobic002G184300--Sobic003G230100 Sobic002G184300--Sobic002G358300 Sobic002G184300--Sobic004G097100 Sobic002G184300--Sobic009G032000 Sobic002G184300--Sobic009G205500 Sobic002G184300--Sobic004G246600 Sobic002G184300--Sobic005G013500 Sobic002G184300--Sobic004G308900
Octagon: transcription factors


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