Gene annotation
Transcriptome id Sobic.003G415000.1
Synonym Sb03g044900
Functional annotation DUF567 domain containing protein, putative, expressed
UniProt C5XH27
Pfam PF04525
Panther DB PTHR31087 PTHR31087:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14260 : Protein of unknown function (DUF567)
RAP-DB (Rice) LOC_Os01g70600.1 : DUF567 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a026164 , Zm00025a039206
Brachypodium KQK14699 , KQK11369
Barley HORVU3Hr1G097270.1 , HORVU3Hr1G097260.1
Wheat TraesCS3B02G487100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G363400 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
2 Sobic.007G122800 expressed protein -
3 Sobic.004G064500 class I glutamine amidotransferase, putative, expressed -
4 Sobic.004G315200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
5 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
6 Sobic.002G358300 expressed protein -
7 Sobic.007G148500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
8 Sobic.004G246600 expressed protein -
9 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
10 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G269000 STE_MEKK_ste11_MAP3K.7 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
12 Sobic.003G268600 - -
13 Sobic.004G308900 AP2 domain containing protein, expressed -
14 Sobic.001G259400 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
15 Sobic.005G013500 WRKY52, expressed -
16 Sobic.004G294400 expansin precursor, putative, expressed -
17 Sobic.005G067933 - -
18 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
19 Sobic.001G195200 cytochrome P450, putative, expressed -
20 Sobic.001G267600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -


Gene co-expression network
sample Sobic003G415000 Sobic003G415000 Sobic001G363400 Sobic001G363400 Sobic003G415000--Sobic001G363400 Sobic007G122800 Sobic007G122800 Sobic003G415000--Sobic007G122800 Sobic004G064500 Sobic004G064500 Sobic003G415000--Sobic004G064500 Sobic004G315200 Sobic004G315200 Sobic003G415000--Sobic004G315200 Sobic002G184300 Sobic002G184300 Sobic003G415000--Sobic002G184300 Sobic002G358300 Sobic002G358300 Sobic003G415000--Sobic002G358300 Sobic007G148500 Sobic007G148500 Sobic003G415000--Sobic007G148500 Sobic004G246600 Sobic004G246600 Sobic003G415000--Sobic004G246600 Sobic001G330400 Sobic001G330400 Sobic003G415000--Sobic001G330400 Sobic001G363400--Sobic002G184300 Sobic001G330200 Sobic001G330200 Sobic001G363400--Sobic001G330200 Sobic005G013500 Sobic005G013500 Sobic001G363400--Sobic005G013500 Sobic009G032000 Sobic009G032000 Sobic001G363400--Sobic009G032000 Sobic001G330100 Sobic001G330100 Sobic001G363400--Sobic001G330100 Sobic001G363400--Sobic002G358300 Sobic009G144700 Sobic009G144700 Sobic001G363400--Sobic009G144700 Sobic001G363400--Sobic001G330400 Sobic001G363400--Sobic004G246600 Sobic007G122800--Sobic002G358300 Sobic004G308900 Sobic004G308900 Sobic007G122800--Sobic004G308900 Sobic004G191400 Sobic004G191400 Sobic007G122800--Sobic004G191400 Sobic004G294400 Sobic004G294400 Sobic007G122800--Sobic004G294400 Sobic004G191300 Sobic004G191300 Sobic007G122800--Sobic004G191300 Sobic001G195200 Sobic001G195200 Sobic007G122800--Sobic001G195200 Sobic006G007900 Sobic006G007900 Sobic007G122800--Sobic006G007900 Sobic009G122400 Sobic009G122400 Sobic007G122800--Sobic009G122400 Sobic003G268600 Sobic003G268600 Sobic007G122800--Sobic003G268600 Sobic009G192600 Sobic009G192600 Sobic004G064500--Sobic009G192600 Sobic001G259400 Sobic001G259400 Sobic004G064500--Sobic001G259400 Sobic004G064500--Sobic007G122800 Sobic005G086600 Sobic005G086600 Sobic004G064500--Sobic005G086600 Sobic004G064500--Sobic003G268600 Sobic002G189100 Sobic002G189100 Sobic004G064500--Sobic002G189100 Sobic003G269000 Sobic003G269000 Sobic004G064500--Sobic003G269000 Sobic001G267600 Sobic001G267600 Sobic004G064500--Sobic001G267600 Sobic004G064500--Sobic006G007900 Sobic004G315200--Sobic001G330400 Sobic004G315200--Sobic003G269000 Sobic001G431500 Sobic001G431500 Sobic004G315200--Sobic001G431500 Sobic002G220000 Sobic002G220000 Sobic004G315200--Sobic002G220000 Sobic004G315200--Sobic004G064500 Sobic002G063800 Sobic002G063800 Sobic004G315200--Sobic002G063800 Sobic004G315200--Sobic002G184300 Sobic004G315200--Sobic003G268600 Sobic003G093000 Sobic003G093000 Sobic004G315200--Sobic003G093000 Sobic002G184300--Sobic001G363400 Sobic003G230100 Sobic003G230100 Sobic002G184300--Sobic003G230100 Sobic002G184300--Sobic002G358300 Sobic004G097100 Sobic004G097100 Sobic002G184300--Sobic004G097100 Sobic002G184300--Sobic009G032000 Sobic009G205500 Sobic009G205500 Sobic002G184300--Sobic009G205500 Sobic002G184300--Sobic004G246600 Sobic002G184300--Sobic005G013500 Sobic002G184300--Sobic004G308900 Sobic002G358300--Sobic004G308900 Sobic002G358300--Sobic007G122800 Sobic002G358300--Sobic001G195200 Sobic002G358300--Sobic009G032000 Sobic002G358300--Sobic004G191400 Sobic004G169200 Sobic004G169200 Sobic002G358300--Sobic004G169200 Sobic002G358300--Sobic004G191300 Sobic002G395300 Sobic002G395300 Sobic002G358300--Sobic002G395300 Sobic002G358300--Sobic004G294400 Sobic007G148500--Sobic004G246600 Sobic001G311900 Sobic001G311900 Sobic007G148500--Sobic001G311900 Sobic001G143100 Sobic001G143100 Sobic007G148500--Sobic001G143100 Sobic004G229500 Sobic004G229500 Sobic007G148500--Sobic004G229500 Sobic007G148500--Sobic005G013500 Sobic007G148500--Sobic009G205500 Sobic007G148500--Sobic007G122800 Sobic002G269100 Sobic002G269100 Sobic007G148500--Sobic002G269100 Sobic007G148500--Sobic002G184300 Sobic004G246600--Sobic004G229500 Sobic004G246600--Sobic009G032000 Sobic004G246600--Sobic004G308900 Sobic004G246600--Sobic005G013500 Sobic004G246600--Sobic002G358300 Sobic004G246600--Sobic004G097100 Sobic004G246600--Sobic001G143100 Sobic004G246600--Sobic002G269100 Sobic004G246600--Sobic002G184300 Sobic001G330400--Sobic003G268600 Sobic006G075400 Sobic006G075400 Sobic001G330400--Sobic006G075400 Sobic004G219800 Sobic004G219800 Sobic001G330400--Sobic004G219800 Sobic007G017500 Sobic007G017500 Sobic001G330400--Sobic007G017500 Sobic001G330400--Sobic009G122400 Sobic001G330400--Sobic004G294400 Sobic001G318700 Sobic001G318700 Sobic001G330400--Sobic001G318700 Sobic001G330400--Sobic002G220000 Sobic001G330400--Sobic001G330100
Octagon: transcription factors


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