Gene annotation
Transcriptome id Sobic.001G143100.2
Synonym Sb01g012460
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
myb-like DNA-binding domain containing protein, expressed
UniProt A0A1Z5S5N0
Pfam PF00249
Panther DB PTHR12802 PTHR12802:SF55
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09600 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os05g07010.2 : myb-like DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009180 , Zm00025a009179
Brachypodium -
Barley -
Wheat TraesCS1A02G107700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G269100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
2 Sobic.004G246600 expressed protein -
3 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
4 Sobic.007G148500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
5 Sobic.004G308900 AP2 domain containing protein, expressed -
6 Sobic.002G358300 expressed protein -
7 Sobic.004G295600 AP2 domain containing protein, expressed -
8 Sobic.004G097100 F-box family protein, putative, expressed -
9 Sobic.005G013500 WRKY52, expressed -
10 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
11 Sobic.009G194400 expressed protein -
12 Sobic.001G311900 OsSCP47 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
13 Sobic.002G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
15 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.007G122800 expressed protein -
17 Sobic.006G170000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
18 Sobic.002G184300 heat shock protein DnaJ, putative, expressed -
19 Sobic.001G295700 Triacylglycerol lipase like protein (Os)(PubMedID : 27208977)@triacylglycerol lipase like protein, putative, expressed -
20 Sobic.006G187900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase


Gene co-expression network
sample Sobic001G143100 Sobic001G143100 Sobic002G269100 Sobic002G269100 Sobic001G143100--Sobic002G269100 Sobic004G246600 Sobic004G246600 Sobic001G143100--Sobic004G246600 Sobic004G229500 Sobic004G229500 Sobic001G143100--Sobic004G229500 Sobic007G148500 Sobic007G148500 Sobic001G143100--Sobic007G148500 Sobic004G308900 Sobic004G308900 Sobic001G143100--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic001G143100--Sobic002G358300 Sobic004G295600 Sobic004G295600 Sobic001G143100--Sobic004G295600 Sobic004G097100 Sobic004G097100 Sobic001G143100--Sobic004G097100 Sobic005G013500 Sobic005G013500 Sobic001G143100--Sobic005G013500 Sobic002G269100--Sobic001G143100 Sobic002G269100--Sobic004G246600 Sobic002G269100--Sobic004G295600 Sobic002G269100--Sobic004G097100 Sobic002G269100--Sobic004G308900 Sobic002G269100--Sobic002G358300 Sobic009G194400 Sobic009G194400 Sobic002G269100--Sobic009G194400 Sobic002G269100--Sobic004G229500 Sobic006G187900 Sobic006G187900 Sobic002G269100--Sobic006G187900 Sobic004G246600--Sobic004G229500 Sobic009G032000 Sobic009G032000 Sobic004G246600--Sobic009G032000 Sobic004G246600--Sobic004G308900 Sobic004G246600--Sobic005G013500 Sobic004G246600--Sobic002G358300 Sobic004G246600--Sobic004G097100 Sobic004G246600--Sobic001G143100 Sobic004G246600--Sobic002G269100 Sobic002G184300 Sobic002G184300 Sobic004G246600--Sobic002G184300 Sobic004G229500--Sobic004G246600 Sobic004G229500--Sobic005G013500 Sobic004G229500--Sobic004G097100 Sobic003G427800 Sobic003G427800 Sobic004G229500--Sobic003G427800 Sobic004G229500--Sobic009G032000 Sobic004G229500--Sobic004G308900 Sobic009G183900 Sobic009G183900 Sobic004G229500--Sobic009G183900 Sobic009G205500 Sobic009G205500 Sobic004G229500--Sobic009G205500 Sobic004G229500--Sobic002G184300 Sobic007G148500--Sobic004G246600 Sobic001G311900 Sobic001G311900 Sobic007G148500--Sobic001G311900 Sobic007G148500--Sobic001G143100 Sobic007G148500--Sobic004G229500 Sobic007G148500--Sobic005G013500 Sobic007G148500--Sobic009G205500 Sobic007G122800 Sobic007G122800 Sobic007G148500--Sobic007G122800 Sobic007G148500--Sobic002G269100 Sobic007G148500--Sobic002G184300 Sobic004G308900--Sobic002G358300 Sobic004G308900--Sobic007G122800 Sobic001G195200 Sobic001G195200 Sobic004G308900--Sobic001G195200 Sobic001G256700 Sobic001G256700 Sobic004G308900--Sobic001G256700 Sobic004G191400 Sobic004G191400 Sobic004G308900--Sobic004G191400 Sobic004G308900--Sobic009G032000 Sobic004G308900--Sobic004G246600 Sobic002G388900 Sobic002G388900 Sobic004G308900--Sobic002G388900 Sobic004G191300 Sobic004G191300 Sobic004G308900--Sobic004G191300 Sobic002G358300--Sobic004G308900 Sobic002G358300--Sobic007G122800 Sobic002G358300--Sobic001G195200 Sobic002G358300--Sobic009G032000 Sobic002G358300--Sobic004G191400 Sobic004G169200 Sobic004G169200 Sobic002G358300--Sobic004G169200 Sobic002G358300--Sobic004G191300 Sobic002G395300 Sobic002G395300 Sobic002G358300--Sobic002G395300 Sobic004G294400 Sobic004G294400 Sobic002G358300--Sobic004G294400 Sobic004G295600--Sobic002G269100 Sobic004G295600--Sobic001G143100 Sobic002G388800 Sobic002G388800 Sobic004G295600--Sobic002G388800 Sobic004G295600--Sobic006G187900 Sobic004G295600--Sobic001G311900 Sobic004G295600--Sobic004G229500 Sobic005G180500 Sobic005G180500 Sobic004G295600--Sobic005G180500 Sobic010G104300 Sobic010G104300 Sobic004G295600--Sobic010G104300 Sobic004G295600--Sobic004G246600 Sobic003G230100 Sobic003G230100 Sobic004G097100--Sobic003G230100 Sobic004G097100--Sobic004G229500 Sobic004G097100--Sobic004G246600 Sobic004G097100--Sobic006G187900 Sobic009G241801 Sobic009G241801 Sobic004G097100--Sobic009G241801 Sobic004G097100--Sobic005G013500 Sobic004G097100--Sobic002G388900 Sobic004G097100--Sobic004G308900 Sobic004G097100--Sobic002G184300 Sobic005G013500--Sobic004G229500 Sobic005G013500--Sobic009G183900 Sobic005G013500--Sobic004G246600 Sobic005G013500--Sobic009G032000 Sobic009G144700 Sobic009G144700 Sobic005G013500--Sobic009G144700 Sobic005G013500--Sobic004G097100 Sobic001G363400 Sobic001G363400 Sobic005G013500--Sobic001G363400 Sobic005G013500--Sobic004G294400 Sobic004G108200 Sobic004G108200 Sobic005G013500--Sobic004G108200
Octagon: transcription factors


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