Gene annotation
Transcriptome id Sobic.006G170000.1
Synonym ethylene response factor 70, SbERF70, Sb06g024540, TINY2
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt A0A1Z5REB5
Pfam PF00847
Panther DB PTHR31985 PTHR31985:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G11590 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os04g46410.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032199 , Zm00025a035855 , Zm00025a022970 , Zm00025a010316 , Zm00025a010312 , Zm00025a032201 , Zm00025a020883 , Zm00025a020882 , Zm00025a020881 , Zm00025a056876 , Zm00025a056875
Brachypodium KQK00605 , KQK00604 , KQJ83929
Barley HORVU1Hr1G056090.1 , HORVU0Hr1G018290.1 , HORVU0Hr1G016370.1 , HORVU3Hr1G026950.1 , HORVU0Hr1G018280.1 , HORVU0Hr1G030500.1 , HORVU0Hr1G018240.1 , HORVU6Hr1G062940.1 , HORVU2Hr1G097850.6 , HORVU2Hr1G097850.5 , HORVU2Hr1G097850.4 , HORVU2Hr1G097850.3 , HORVU2Hr1G097850.1 , HORVU3Hr1G086870.2 , HORVU3Hr1G086870.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
2 Sobic.004G352000 cytochrome P450, putative, expressed -
3 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
4 Sobic.004G004500 lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
5 Sobic.008G187001 - K09422: transcription factor MYB, plant
6 Sobic.004G246600 expressed protein -
7 Sobic.004G092800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
8 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
9 Sobic.009G194400 expressed protein -
10 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
11 Sobic.009G032000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
13 Sobic.004G308900 AP2 domain containing protein, expressed -
14 Sobic.002G369301 - -
15 Sobic.004G097100 F-box family protein, putative, expressed -
16 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
17 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.001G279701 - -
19 Sobic.005G013500 WRKY52, expressed -
20 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic006G170000 Sobic006G170000 Sobic003G370600 Sobic003G370600 Sobic006G170000--Sobic003G370600 Sobic004G352000 Sobic004G352000 Sobic006G170000--Sobic004G352000 Sobic001G256700 Sobic001G256700 Sobic006G170000--Sobic001G256700 Sobic004G004500 Sobic004G004500 Sobic006G170000--Sobic004G004500 Sobic008G187001 Sobic008G187001 Sobic006G170000--Sobic008G187001 Sobic004G246600 Sobic004G246600 Sobic006G170000--Sobic004G246600 Sobic004G092800 Sobic004G092800 Sobic006G170000--Sobic004G092800 Sobic002G388900 Sobic002G388900 Sobic006G170000--Sobic002G388900 Sobic009G194400 Sobic009G194400 Sobic006G170000--Sobic009G194400 Sobic003G370600--Sobic006G170000 Sobic003G370600--Sobic004G352000 Sobic003G370600--Sobic009G194400 Sobic003G370600--Sobic001G256700 Sobic003G370600--Sobic004G092800 Sobic003G370600--Sobic004G246600 Sobic009G144700 Sobic009G144700 Sobic003G370600--Sobic009G144700 Sobic003G370600--Sobic004G004500 Sobic003G370600--Sobic002G388900 Sobic004G352000--Sobic003G370600 Sobic004G352000--Sobic009G144700 Sobic004G219800 Sobic004G219800 Sobic004G352000--Sobic004G219800 Sobic004G352000--Sobic001G256700 Sobic001G330100 Sobic001G330100 Sobic004G352000--Sobic001G330100 Sobic004G352000--Sobic002G388900 Sobic004G108200 Sobic004G108200 Sobic004G352000--Sobic004G108200 Sobic009G032000 Sobic009G032000 Sobic004G352000--Sobic009G032000 Sobic004G352000--Sobic008G187001 Sobic001G256700--Sobic008G187001 Sobic001G256700--Sobic004G004500 Sobic001G256700--Sobic002G388900 Sobic004G294400 Sobic004G294400 Sobic001G256700--Sobic004G294400 Sobic001G256700--Sobic004G219800 Sobic002G395300 Sobic002G395300 Sobic001G256700--Sobic002G395300 Sobic002G339000 Sobic002G339000 Sobic001G256700--Sobic002G339000 Sobic001G256700--Sobic001G330100 Sobic001G195200 Sobic001G195200 Sobic001G256700--Sobic001G195200 Sobic004G004500--Sobic002G339000 Sobic004G004500--Sobic001G256700 Sobic007G036900 Sobic007G036900 Sobic004G004500--Sobic007G036900 Sobic003G148300 Sobic003G148300 Sobic004G004500--Sobic003G148300 Sobic004G004500--Sobic004G108200 Sobic004G004500--Sobic001G195200 Sobic009G189501 Sobic009G189501 Sobic004G004500--Sobic009G189501 Sobic004G004500--Sobic004G294400 Sobic004G229800 Sobic004G229800 Sobic004G004500--Sobic004G229800 Sobic008G187001--Sobic002G388900 Sobic008G187001--Sobic001G256700 Sobic008G187001--Sobic007G036900 Sobic009G224100 Sobic009G224100 Sobic008G187001--Sobic009G224100 Sobic008G187001--Sobic004G219800 Sobic008G187001--Sobic009G032000 Sobic008G187001--Sobic001G330100 Sobic009G122400 Sobic009G122400 Sobic008G187001--Sobic009G122400 Sobic008G187001--Sobic004G352000 Sobic004G229500 Sobic004G229500 Sobic004G246600--Sobic004G229500 Sobic004G246600--Sobic009G032000 Sobic004G308900 Sobic004G308900 Sobic004G246600--Sobic004G308900 Sobic005G013500 Sobic005G013500 Sobic004G246600--Sobic005G013500 Sobic002G358300 Sobic002G358300 Sobic004G246600--Sobic002G358300 Sobic004G097100 Sobic004G097100 Sobic004G246600--Sobic004G097100 Sobic001G143100 Sobic001G143100 Sobic004G246600--Sobic001G143100 Sobic002G269100 Sobic002G269100 Sobic004G246600--Sobic002G269100 Sobic002G184300 Sobic002G184300 Sobic004G246600--Sobic002G184300 Sobic001G232500 Sobic001G232500 Sobic004G092800--Sobic001G232500 Sobic001G065900 Sobic001G065900 Sobic004G092800--Sobic001G065900 Sobic004G092800--Sobic003G370600 Sobic002G388800 Sobic002G388800 Sobic004G092800--Sobic002G388800 Sobic001G425500 Sobic001G425500 Sobic004G092800--Sobic001G425500 Sobic004G263100 Sobic004G263100 Sobic004G092800--Sobic004G263100 Sobic004G092800--Sobic009G194400 Sobic002G369301 Sobic002G369301 Sobic004G092800--Sobic002G369301 Sobic004G092800--Sobic006G170000 Sobic002G388900--Sobic008G187001 Sobic002G388900--Sobic001G256700 Sobic002G388900--Sobic009G144700 Sobic002G388900--Sobic001G330100 Sobic009G241801 Sobic009G241801 Sobic002G388900--Sobic009G241801 Sobic002G388900--Sobic009G032000 Sobic002G388900--Sobic004G352000 Sobic002G388900--Sobic004G219800 Sobic002G388900--Sobic004G308900 Sobic010G196600 Sobic010G196600 Sobic009G194400--Sobic010G196600 Sobic009G194400--Sobic001G425500 Sobic003G323201 Sobic003G323201 Sobic009G194400--Sobic003G323201 Sobic001G425600 Sobic001G425600 Sobic009G194400--Sobic001G425600 Sobic009G194400--Sobic003G370600 Sobic004G109700 Sobic004G109700 Sobic009G194400--Sobic004G109700 Sobic009G194400--Sobic004G097100 Sobic009G194400--Sobic002G388900 Sobic009G194400--Sobic004G092800
Octagon: transcription factors


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