Gene annotation
Transcriptome id Sobic.004G295600.1
Synonym
Functional annotation AP2 domain containing protein, expressed
UniProt A0A194YS75
Pfam PF00847
Panther DB PTHR31985 PTHR31985:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G11590 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os04g46410.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032199 , Zm00025a035855 , Zm00025a022970 , Zm00025a032201 , Zm00025a020883 , Zm00025a020882 , Zm00025a020881 , Zm00025a056875
Brachypodium KQK00606 , KQJ83929 , KQJ94139
Barley HORVU2Hr1G097850.6 , HORVU2Hr1G097850.5 , HORVU2Hr1G097850.4 , HORVU2Hr1G097850.3 , HORVU2Hr1G097850.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G269100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
2 Sobic.001G143100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
3 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
4 Sobic.006G187900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
5 Sobic.001G311900 OsSCP47 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
6 Sobic.004G229500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
7 Sobic.005G180500 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.010G104300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
9 Sobic.004G246600 expressed protein -
10 Sobic.004G097100 F-box family protein, putative, expressed -
11 Sobic.007G148500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
12 Sobic.002G225700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.002G238600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
14 Sobic.009G194400 expressed protein -
15 Sobic.005G013500 WRKY52, expressed -
16 Sobic.002G390000 dirigent, putative, expressed -
17 Sobic.003G060100 expressed protein -
18 Sobic.006G163401 - -
19 Sobic.001G495132 - -
20 Sobic.004G263100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein


Gene co-expression network
sample Sobic004G295600 Sobic004G295600 Sobic002G269100 Sobic002G269100 Sobic004G295600--Sobic002G269100 Sobic001G143100 Sobic001G143100 Sobic004G295600--Sobic001G143100 Sobic002G388800 Sobic002G388800 Sobic004G295600--Sobic002G388800 Sobic006G187900 Sobic006G187900 Sobic004G295600--Sobic006G187900 Sobic001G311900 Sobic001G311900 Sobic004G295600--Sobic001G311900 Sobic004G229500 Sobic004G229500 Sobic004G295600--Sobic004G229500 Sobic005G180500 Sobic005G180500 Sobic004G295600--Sobic005G180500 Sobic010G104300 Sobic010G104300 Sobic004G295600--Sobic010G104300 Sobic004G246600 Sobic004G246600 Sobic004G295600--Sobic004G246600 Sobic002G269100--Sobic001G143100 Sobic002G269100--Sobic004G246600 Sobic002G269100--Sobic004G295600 Sobic004G097100 Sobic004G097100 Sobic002G269100--Sobic004G097100 Sobic004G308900 Sobic004G308900 Sobic002G269100--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic002G269100--Sobic002G358300 Sobic009G194400 Sobic009G194400 Sobic002G269100--Sobic009G194400 Sobic002G269100--Sobic004G229500 Sobic002G269100--Sobic006G187900 Sobic001G143100--Sobic002G269100 Sobic001G143100--Sobic004G246600 Sobic001G143100--Sobic004G229500 Sobic007G148500 Sobic007G148500 Sobic001G143100--Sobic007G148500 Sobic001G143100--Sobic004G308900 Sobic001G143100--Sobic002G358300 Sobic001G143100--Sobic004G295600 Sobic001G143100--Sobic004G097100 Sobic005G013500 Sobic005G013500 Sobic001G143100--Sobic005G013500 Sobic004G263100 Sobic004G263100 Sobic002G388800--Sobic004G263100 Sobic005G171001 Sobic005G171001 Sobic002G388800--Sobic005G171001 Sobic004G092800 Sobic004G092800 Sobic002G388800--Sobic004G092800 Sobic001G065900 Sobic001G065900 Sobic002G388800--Sobic001G065900 Sobic001G381400 Sobic001G381400 Sobic002G388800--Sobic001G381400 Sobic002G390000 Sobic002G390000 Sobic002G388800--Sobic002G390000 Sobic002G102132 Sobic002G102132 Sobic002G388800--Sobic002G102132 Sobic007G159100 Sobic007G159100 Sobic002G388800--Sobic007G159100 Sobic004G251800 Sobic004G251800 Sobic002G388800--Sobic004G251800 Sobic006G187900--Sobic004G097100 Sobic006G187900--Sobic004G229500 Sobic006G187900--Sobic005G013500 Sobic006G187900--Sobic004G246600 Sobic006G187900--Sobic002G269100 Sobic001G035100 Sobic001G035100 Sobic006G187900--Sobic001G035100 Sobic009G183900 Sobic009G183900 Sobic006G187900--Sobic009G183900 Sobic006G187900--Sobic004G295600 Sobic002G184300 Sobic002G184300 Sobic006G187900--Sobic002G184300 Sobic001G311900--Sobic007G148500 Sobic001G311900--Sobic004G295600 Sobic001G311900--Sobic001G143100 Sobic001G311900--Sobic005G180500 Sobic001G311900--Sobic002G269100 Sobic001G211200 Sobic001G211200 Sobic001G311900--Sobic001G211200 Sobic001G311900--Sobic004G229500 Sobic001G363400 Sobic001G363400 Sobic001G311900--Sobic001G363400 Sobic001G311900--Sobic004G246600 Sobic004G229500--Sobic004G246600 Sobic004G229500--Sobic005G013500 Sobic004G229500--Sobic004G097100 Sobic003G427800 Sobic003G427800 Sobic004G229500--Sobic003G427800 Sobic009G032000 Sobic009G032000 Sobic004G229500--Sobic009G032000 Sobic004G229500--Sobic004G308900 Sobic004G229500--Sobic009G183900 Sobic009G205500 Sobic009G205500 Sobic004G229500--Sobic009G205500 Sobic004G229500--Sobic002G184300 Sobic008G077550 Sobic008G077550 Sobic005G180500--Sobic008G077550 Sobic002G238600 Sobic002G238600 Sobic005G180500--Sobic002G238600 Sobic010G135100 Sobic010G135100 Sobic005G180500--Sobic010G135100 Sobic005G180500--Sobic004G295600 Sobic005G180500--Sobic001G311900 Sobic005G180500--Sobic004G229500 Sobic005G180500--Sobic002G390000 Sobic003G060100 Sobic003G060100 Sobic005G180500--Sobic003G060100 Sobic004G229400 Sobic004G229400 Sobic005G180500--Sobic004G229400 Sobic010G104300--Sobic009G194400 Sobic001G495132 Sobic001G495132 Sobic010G104300--Sobic001G495132 Sobic010G104300--Sobic002G388800 Sobic010G104300--Sobic004G092800 Sobic010G104300--Sobic002G269100 Sobic001G425500 Sobic001G425500 Sobic010G104300--Sobic001G425500 Sobic010G104300--Sobic004G295600 Sobic001G338600 Sobic001G338600 Sobic010G104300--Sobic001G338600 Sobic001G440200 Sobic001G440200 Sobic010G104300--Sobic001G440200 Sobic004G246600--Sobic004G229500 Sobic004G246600--Sobic009G032000 Sobic004G246600--Sobic004G308900 Sobic004G246600--Sobic005G013500 Sobic004G246600--Sobic002G358300 Sobic004G246600--Sobic004G097100 Sobic004G246600--Sobic001G143100 Sobic004G246600--Sobic002G269100 Sobic004G246600--Sobic002G184300
Octagon: transcription factors


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