Gene annotation
Transcriptome id Sobic.010G104300.1
Synonym Sb10g009090,
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
hsp20/alpha crystallin family protein, putative, expressed
UniProt C5Z7Y8
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF142
NCBI CDD KOG3591; Alpha crystallins
KEGG Orthology K13993; HSP20 family protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G37670 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os06g14240.1 : hsp20/alpha crystallin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a049370
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G104300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G194400 expressed protein -
2 Sobic.001G495132 - -
3 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
4 Sobic.004G092800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
5 Sobic.002G269100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
7 Sobic.004G295600 AP2 domain containing protein, expressed -
8 Sobic.001G338600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
9 Sobic.001G440200 senescence-associated protein, putative, expressed -
10 Sobic.003G323201 - -
11 Sobic.004G228900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
12 Sobic.002G225700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.001G425600 "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
14 Sobic.001G426000 Up-reguralion under heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
15 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.004G263100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
17 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
18 Sobic.006G187900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
19 Sobic.004G109700 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.001G065900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic010G104300 Sobic010G104300 Sobic009G194400 Sobic009G194400 Sobic010G104300--Sobic009G194400 Sobic001G495132 Sobic001G495132 Sobic010G104300--Sobic001G495132 Sobic002G388800 Sobic002G388800 Sobic010G104300--Sobic002G388800 Sobic004G092800 Sobic004G092800 Sobic010G104300--Sobic004G092800 Sobic002G269100 Sobic002G269100 Sobic010G104300--Sobic002G269100 Sobic001G425500 Sobic001G425500 Sobic010G104300--Sobic001G425500 Sobic004G295600 Sobic004G295600 Sobic010G104300--Sobic004G295600 Sobic001G338600 Sobic001G338600 Sobic010G104300--Sobic001G338600 Sobic001G440200 Sobic001G440200 Sobic010G104300--Sobic001G440200 Sobic010G196600 Sobic010G196600 Sobic009G194400--Sobic010G196600 Sobic009G194400--Sobic001G425500 Sobic003G323201 Sobic003G323201 Sobic009G194400--Sobic003G323201 Sobic001G425600 Sobic001G425600 Sobic009G194400--Sobic001G425600 Sobic003G370600 Sobic003G370600 Sobic009G194400--Sobic003G370600 Sobic004G109700 Sobic004G109700 Sobic009G194400--Sobic004G109700 Sobic004G097100 Sobic004G097100 Sobic009G194400--Sobic004G097100 Sobic002G388900 Sobic002G388900 Sobic009G194400--Sobic002G388900 Sobic009G194400--Sobic004G092800 Sobic001G495132--Sobic010G104300 Sobic001G495132--Sobic009G194400 Sobic004G228500 Sobic004G228500 Sobic001G495132--Sobic004G228500 Sobic001G495132--Sobic004G097100 Sobic006G187900 Sobic006G187900 Sobic001G495132--Sobic006G187900 Sobic006G267000 Sobic006G267000 Sobic001G495132--Sobic006G267000 Sobic003G060100 Sobic003G060100 Sobic001G495132--Sobic003G060100 Sobic001G495132--Sobic003G370600 Sobic004G251800 Sobic004G251800 Sobic001G495132--Sobic004G251800 Sobic004G263100 Sobic004G263100 Sobic002G388800--Sobic004G263100 Sobic005G171001 Sobic005G171001 Sobic002G388800--Sobic005G171001 Sobic002G388800--Sobic004G092800 Sobic001G065900 Sobic001G065900 Sobic002G388800--Sobic001G065900 Sobic001G381400 Sobic001G381400 Sobic002G388800--Sobic001G381400 Sobic002G390000 Sobic002G390000 Sobic002G388800--Sobic002G390000 Sobic002G102132 Sobic002G102132 Sobic002G388800--Sobic002G102132 Sobic007G159100 Sobic007G159100 Sobic002G388800--Sobic007G159100 Sobic002G388800--Sobic004G251800 Sobic001G232500 Sobic001G232500 Sobic004G092800--Sobic001G232500 Sobic004G092800--Sobic001G065900 Sobic004G092800--Sobic003G370600 Sobic004G092800--Sobic002G388800 Sobic004G092800--Sobic001G425500 Sobic004G092800--Sobic004G263100 Sobic004G092800--Sobic009G194400 Sobic002G369301 Sobic002G369301 Sobic004G092800--Sobic002G369301 Sobic006G170000 Sobic006G170000 Sobic004G092800--Sobic006G170000 Sobic001G143100 Sobic001G143100 Sobic002G269100--Sobic001G143100 Sobic004G246600 Sobic004G246600 Sobic002G269100--Sobic004G246600 Sobic002G269100--Sobic004G295600 Sobic002G269100--Sobic004G097100 Sobic004G308900 Sobic004G308900 Sobic002G269100--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic002G269100--Sobic002G358300 Sobic002G269100--Sobic009G194400 Sobic004G229500 Sobic004G229500 Sobic002G269100--Sobic004G229500 Sobic002G269100--Sobic006G187900 Sobic001G425500--Sobic001G425600 Sobic001G425500--Sobic004G109700 Sobic001G425500--Sobic009G194400 Sobic001G425500--Sobic010G196600 Sobic004G273300 Sobic004G273300 Sobic001G425500--Sobic004G273300 Sobic001G425500--Sobic003G323201 Sobic001G425500--Sobic004G092800 Sobic004G109600 Sobic004G109600 Sobic001G425500--Sobic004G109600 Sobic001G481300 Sobic001G481300 Sobic001G425500--Sobic001G481300 Sobic004G295600--Sobic002G269100 Sobic004G295600--Sobic001G143100 Sobic004G295600--Sobic002G388800 Sobic004G295600--Sobic006G187900 Sobic001G311900 Sobic001G311900 Sobic004G295600--Sobic001G311900 Sobic004G295600--Sobic004G229500 Sobic005G180500 Sobic005G180500 Sobic004G295600--Sobic005G180500 Sobic004G295600--Sobic010G104300 Sobic004G295600--Sobic004G246600 Sobic002G282300 Sobic002G282300 Sobic001G338600--Sobic002G282300 Sobic002G278500 Sobic002G278500 Sobic001G338600--Sobic002G278500 Sobic004G228900 Sobic004G228900 Sobic001G338600--Sobic004G228900 Sobic001G426000 Sobic001G426000 Sobic001G338600--Sobic001G426000 Sobic001G205350 Sobic001G205350 Sobic001G338600--Sobic001G205350 Sobic006G230900 Sobic006G230900 Sobic001G338600--Sobic006G230900 Sobic003G144700 Sobic003G144700 Sobic001G338600--Sobic003G144700 Sobic001G441100 Sobic001G441100 Sobic001G338600--Sobic001G441100 Sobic004G283500 Sobic004G283500 Sobic001G338600--Sobic004G283500 Sobic001G440200--Sobic010G196600 Sobic001G440200--Sobic004G283500 Sobic001G440200--Sobic009G194400 Sobic001G035100 Sobic001G035100 Sobic001G440200--Sobic001G035100 Sobic001G279701 Sobic001G279701 Sobic001G440200--Sobic001G279701 Sobic001G440200--Sobic003G370600 Sobic001G440200--Sobic006G170000 Sobic001G440200--Sobic004G097100 Sobic008G187001 Sobic008G187001 Sobic001G440200--Sobic008G187001
Octagon: transcription factors


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