Gene annotation
Transcriptome id Sobic.004G228900.2,Sobic.004G228900.1
Synonym Sb04g027330,
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
heat shock 22 kDa protein, mitochondrial precursor, putative, expressed
UniProt C5XYB0 , A0A1Z5RPL7
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF95
NCBI CDD KOG0710; Molecular chaperone (small heat-shock protein Hsp26/Hsp42)
KEGG Orthology K13993; HSP20 family protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G51440 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os02g52150.2,LOC_Os02g52150.1 : heat shock 22 kDa protein, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a033133
Brachypodium KQK01814 , PNT69599
Barley HORVU7Hr1G036470.11 , HORVU7Hr1G036470.12 , HORVU7Hr1G036470.15 , HORVU7Hr1G036470.14 , HORVU7Hr1G036470.17 , HORVU7Hr1G036470.16 , HORVU7Hr1G036470.9 , HORVU7Hr1G036470.8 , HORVU7Hr1G036470.5 , HORVU7Hr1G036470.1 , HORVU7Hr1G036470.2 , HORVU6Hr1G077710.2 , HORVU6Hr1G077710.3 , HORVU6Hr1G077710.6 , HORVU6Hr1G077710.4 , HORVU6Hr1G077710.5 , HORVU7Hr1G036470.10 , HORVU7Hr1G036470.13 , HORVU7Hr1G036540.4 , HORVU7Hr1G036540.1 , HORVU7Hr1G036540.2 , HORVU7Hr1G036470.3 , HORVU7Hr1G036500.2 , HORVU7Hr1G036500.5 , HORVU7Hr1G036500.4 , HORVU7Hr1G036500.7 , HORVU7Hr1G036500.8
Wheat TraesCS7D02G179500 , TraesCS7A02G177500 , TraesCS6B02G346700 , TraesCS6B02G346700 , TraesCS2B02G531300 , TraesCS7B02G083200 , TraesCS7D02G179200 , TraesCS7B02G083200 , TraesCS7A02G177700 , TraesCS6A02G316200 , TraesCS7B02G130900 , TraesCS6D02G295500 , TraesCS6D02G295500 , TraesCS7D02G232600 , TraesCS7A02G236700 , TraesCS7D02G179300
Populus -


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cDNA sequences
Sobic.004G228900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G122500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@IQ calmodulin-binding and BAG domain containing protein, putative, expressed -
2 Sobic.001G426000 Up-reguralion under heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
3 Sobic.002G278500 nodulin, putative, expressed -
4 Sobic.001G338600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
5 Sobic.003G350700 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
6 Sobic.004G249900 - -
7 Sobic.003G310700 mal d 1-associated protein, putative, expressed -
8 Sobic.010G234700 expressed protein -
9 Sobic.010G104300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
10 Sobic.002G282300 expressed protein -
11 Sobic.010G234600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
12 Sobic.007G057700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
13 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
14 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
15 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G267000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
18 Sobic.006G194000 DUF581 domain containing protein, expressed -
19 Sobic.009G169000 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01568: PDC, pyruvate decarboxylase
20 Sobic.001G495132 - -


Gene co-expression network
sample Sobic004G228900 Sobic004G228900 Sobic005G122500 Sobic005G122500 Sobic004G228900--Sobic005G122500 Sobic001G426000 Sobic001G426000 Sobic004G228900--Sobic001G426000 Sobic002G278500 Sobic002G278500 Sobic004G228900--Sobic002G278500 Sobic001G338600 Sobic001G338600 Sobic004G228900--Sobic001G338600 Sobic003G350700 Sobic003G350700 Sobic004G228900--Sobic003G350700 Sobic004G249900 Sobic004G249900 Sobic004G228900--Sobic004G249900 Sobic003G310700 Sobic003G310700 Sobic004G228900--Sobic003G310700 Sobic010G234700 Sobic010G234700 Sobic004G228900--Sobic010G234700 Sobic010G104300 Sobic010G104300 Sobic004G228900--Sobic010G104300 Sobic005G122500--Sobic004G228900 Sobic005G122500--Sobic004G249900 Sobic005G122500--Sobic002G278500 Sobic005G122500--Sobic001G338600 Sobic005G122500--Sobic001G426000 Sobic005G122500--Sobic003G350700 Sobic005G122500--Sobic010G234700 Sobic009G231400 Sobic009G231400 Sobic005G122500--Sobic009G231400 Sobic001G424200 Sobic001G424200 Sobic005G122500--Sobic001G424200 Sobic001G426000--Sobic004G228900 Sobic009G169000 Sobic009G169000 Sobic001G426000--Sobic009G169000 Sobic001G426000--Sobic001G338600 Sobic010G196600 Sobic010G196600 Sobic001G426000--Sobic010G196600 Sobic001G426000--Sobic003G310700 Sobic001G320900 Sobic001G320900 Sobic001G426000--Sobic001G320900 Sobic003G144700 Sobic003G144700 Sobic001G426000--Sobic003G144700 Sobic002G282300 Sobic002G282300 Sobic001G426000--Sobic002G282300 Sobic001G426000--Sobic002G278500 Sobic002G278500--Sobic004G228900 Sobic001G441100 Sobic001G441100 Sobic002G278500--Sobic001G441100 Sobic002G278500--Sobic001G338600 Sobic002G278500--Sobic005G122500 Sobic009G217600 Sobic009G217600 Sobic002G278500--Sobic009G217600 Sobic002G294700 Sobic002G294700 Sobic002G278500--Sobic002G294700 Sobic002G278500--Sobic002G282300 Sobic001G341600 Sobic001G341600 Sobic002G278500--Sobic001G341600 Sobic008G177800 Sobic008G177800 Sobic002G278500--Sobic008G177800 Sobic001G338600--Sobic002G282300 Sobic001G338600--Sobic002G278500 Sobic001G338600--Sobic004G228900 Sobic001G338600--Sobic001G426000 Sobic001G205350 Sobic001G205350 Sobic001G338600--Sobic001G205350 Sobic006G230900 Sobic006G230900 Sobic001G338600--Sobic006G230900 Sobic001G338600--Sobic003G144700 Sobic001G338600--Sobic001G441100 Sobic004G283500 Sobic004G283500 Sobic001G338600--Sobic004G283500 Sobic003G350700--Sobic004G228900 Sobic003G350700--Sobic009G231400 Sobic003G350700--Sobic001G338600 Sobic003G350700--Sobic005G122500 Sobic003G067800 Sobic003G067800 Sobic003G350700--Sobic003G067800 Sobic003G350700--Sobic001G426000 Sobic003G350700--Sobic002G278500 Sobic009G163900 Sobic009G163900 Sobic003G350700--Sobic009G163900 Sobic003G350700--Sobic010G234700 Sobic004G249900--Sobic005G122500 Sobic004G249900--Sobic004G228900 Sobic001G093200 Sobic001G093200 Sobic004G249900--Sobic001G093200 Sobic004G249900--Sobic002G278500 Sobic004G249900--Sobic001G426000 Sobic004G249900--Sobic001G424200 Sobic004G036600 Sobic004G036600 Sobic004G249900--Sobic004G036600 Sobic004G249900--Sobic003G310700 Sobic003G094200 Sobic003G094200 Sobic004G249900--Sobic003G094200 Sobic003G310700--Sobic001G426000 Sobic001G032800 Sobic001G032800 Sobic003G310700--Sobic001G032800 Sobic003G310700--Sobic004G228900 Sobic003G310700--Sobic004G036600 Sobic009G217000 Sobic009G217000 Sobic003G310700--Sobic009G217000 Sobic006G267200 Sobic006G267200 Sobic003G310700--Sobic006G267200 Sobic003G310700--Sobic009G169000 Sobic010G223600 Sobic010G223600 Sobic003G310700--Sobic010G223600 Sobic006G194000 Sobic006G194000 Sobic003G310700--Sobic006G194000 Sobic010G234600 Sobic010G234600 Sobic010G234700--Sobic010G234600 Sobic002G415600 Sobic002G415600 Sobic010G234700--Sobic002G415600 Sobic004G199300 Sobic004G199300 Sobic010G234700--Sobic004G199300 Sobic001G077700 Sobic001G077700 Sobic010G234700--Sobic001G077700 Sobic010G217800 Sobic010G217800 Sobic010G234700--Sobic010G217800 Sobic010G234700--Sobic006G230900 Sobic010G234700--Sobic008G177800 Sobic003G123600 Sobic003G123600 Sobic010G234700--Sobic003G123600 Sobic006G190500 Sobic006G190500 Sobic010G234700--Sobic006G190500 Sobic009G194400 Sobic009G194400 Sobic010G104300--Sobic009G194400 Sobic001G495132 Sobic001G495132 Sobic010G104300--Sobic001G495132 Sobic002G388800 Sobic002G388800 Sobic010G104300--Sobic002G388800 Sobic004G092800 Sobic004G092800 Sobic010G104300--Sobic004G092800 Sobic002G269100 Sobic002G269100 Sobic010G104300--Sobic002G269100 Sobic001G425500 Sobic001G425500 Sobic010G104300--Sobic001G425500 Sobic004G295600 Sobic004G295600 Sobic010G104300--Sobic004G295600 Sobic010G104300--Sobic001G338600 Sobic001G440200 Sobic001G440200 Sobic010G104300--Sobic001G440200
Octagon: transcription factors


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