Gene annotation
Transcriptome id Sobic.007G057700.1
Synonym Sb07g004635
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
-
UniProt A0A1B6PFU4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g07640.1 : expressed protein
MaizeGDB (Corn) Zm00025a055027 , Zm00025a055026 , Zm00025a055029
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
2 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
3 Sobic.002G278500 nodulin, putative, expressed -
4 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
5 Sobic.006G267000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
6 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
8 Sobic.006G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@prephenate dehydratase domain containing protein, expressed K05359: ADT, arogenate/prephenate dehydratase
9 Sobic.004G222500 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
10 Sobic.010G209100 WRKY28, expressed -
11 Sobic.004G228900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
12 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -
13 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
14 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G387200 - -
16 Sobic.010G223600 ubiquitin family protein, putative, expressed K08770: ubiquitin C
17 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
18 Sobic.005G122500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@IQ calmodulin-binding and BAG domain containing protein, putative, expressed -
19 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
20 Sobic.008G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic007G057700 Sobic007G057700 Sobic001G341600 Sobic001G341600 Sobic007G057700--Sobic001G341600 Sobic001G441100 Sobic001G441100 Sobic007G057700--Sobic001G441100 Sobic002G278500 Sobic002G278500 Sobic007G057700--Sobic002G278500 Sobic009G217600 Sobic009G217600 Sobic007G057700--Sobic009G217600 Sobic006G267000 Sobic006G267000 Sobic007G057700--Sobic006G267000 Sobic002G140300 Sobic002G140300 Sobic007G057700--Sobic002G140300 Sobic006G179500 Sobic006G179500 Sobic007G057700--Sobic006G179500 Sobic006G066200 Sobic006G066200 Sobic007G057700--Sobic006G066200 Sobic004G222500 Sobic004G222500 Sobic007G057700--Sobic004G222500 Sobic001G341600--Sobic009G217600 Sobic001G341600--Sobic001G441100 Sobic001G035000 Sobic001G035000 Sobic001G341600--Sobic001G035000 Sobic001G077400 Sobic001G077400 Sobic001G341600--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic001G341600--Sobic004G280900 Sobic001G341600--Sobic002G140300 Sobic003G353800 Sobic003G353800 Sobic001G341600--Sobic003G353800 Sobic001G341600--Sobic002G278500 Sobic001G538866 Sobic001G538866 Sobic001G341600--Sobic001G538866 Sobic001G441100--Sobic001G035000 Sobic001G441100--Sobic009G217600 Sobic001G441100--Sobic001G077400 Sobic001G441100--Sobic001G341600 Sobic005G037000 Sobic005G037000 Sobic001G441100--Sobic005G037000 Sobic001G441100--Sobic004G280900 Sobic001G441100--Sobic002G278500 Sobic001G209800 Sobic001G209800 Sobic001G441100--Sobic001G209800 Sobic001G441100--Sobic002G140300 Sobic004G228900 Sobic004G228900 Sobic002G278500--Sobic004G228900 Sobic002G278500--Sobic001G441100 Sobic001G338600 Sobic001G338600 Sobic002G278500--Sobic001G338600 Sobic005G122500 Sobic005G122500 Sobic002G278500--Sobic005G122500 Sobic002G278500--Sobic009G217600 Sobic002G294700 Sobic002G294700 Sobic002G278500--Sobic002G294700 Sobic002G282300 Sobic002G282300 Sobic002G278500--Sobic002G282300 Sobic002G278500--Sobic001G341600 Sobic008G177800 Sobic008G177800 Sobic002G278500--Sobic008G177800 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic009G217600--Sobic001G077400 Sobic009G217600--Sobic001G035000 Sobic009G217600--Sobic004G280900 Sobic009G217600--Sobic001G209800 Sobic009G217600--Sobic005G037000 Sobic009G217600--Sobic003G353800 Sobic009G217600--Sobic002G278500 Sobic003G387200 Sobic003G387200 Sobic006G267000--Sobic003G387200 Sobic006G267000--Sobic001G441100 Sobic006G267000--Sobic001G035000 Sobic006G148000 Sobic006G148000 Sobic006G267000--Sobic006G148000 Sobic004G283500 Sobic004G283500 Sobic006G267000--Sobic004G283500 Sobic006G267000--Sobic002G278500 Sobic001G495132 Sobic001G495132 Sobic006G267000--Sobic001G495132 Sobic006G267000--Sobic001G341600 Sobic006G267000--Sobic009G217600 Sobic002G140300--Sobic006G179500 Sobic001G040200 Sobic001G040200 Sobic002G140300--Sobic001G040200 Sobic006G165100 Sobic006G165100 Sobic002G140300--Sobic006G165100 Sobic002G140300--Sobic004G222500 Sobic002G140300--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic002G140300--Sobic009G036100 Sobic006G183400 Sobic006G183400 Sobic002G140300--Sobic006G183400 Sobic003G324400 Sobic003G324400 Sobic002G140300--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G140300--Sobic009G247900 Sobic006G179500--Sobic002G140300 Sobic002G359300 Sobic002G359300 Sobic006G179500--Sobic002G359300 Sobic006G179500--Sobic006G183400 Sobic006G179500--Sobic001G040200 Sobic006G179500--Sobic004G222500 Sobic003G300800 Sobic003G300800 Sobic006G179500--Sobic003G300800 Sobic003G430400 Sobic003G430400 Sobic006G179500--Sobic003G430400 Sobic006G179500--Sobic006G165100 Sobic006G089300 Sobic006G089300 Sobic006G179500--Sobic006G089300 Sobic006G066200--Sobic003G430400 Sobic006G066200--Sobic002G140300 Sobic006G066200--Sobic004G222500 Sobic006G066200--Sobic009G247900 Sobic004G341800 Sobic004G341800 Sobic006G066200--Sobic004G341800 Sobic006G066200--Sobic001G040200 Sobic003G092900 Sobic003G092900 Sobic006G066200--Sobic003G092900 Sobic002G131800 Sobic002G131800 Sobic006G066200--Sobic002G131800 Sobic006G066200--Sobic006G179500 Sobic004G222500--Sobic002G140300 Sobic003G093000 Sobic003G093000 Sobic004G222500--Sobic003G093000 Sobic004G222500--Sobic003G092900 Sobic003G428700 Sobic003G428700 Sobic004G222500--Sobic003G428700 Sobic004G222500--Sobic006G183400 Sobic004G222500--Sobic009G247900 Sobic001G035100 Sobic001G035100 Sobic004G222500--Sobic001G035100 Sobic002G220000 Sobic002G220000 Sobic004G222500--Sobic002G220000 Sobic004G222500--Sobic006G179500
Octagon: transcription factors


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