Gene annotation
Transcriptome id Sobic.010G209100.1
Synonym ATWRKY40, WRKY40, Sb10g025590
Functional annotation WRKY28, expressed
UniProt C5Z6T4
Pfam PF03106
Panther DB PTHR31429 PTHR31429:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G80840 : WRKY DNA-binding protein 40
RAP-DB (Rice) LOC_Os06g44010.1 : WRKY28, expressed
MaizeGDB (Corn) Zm00025a051603 , Zm00025a047001 , Zm00025a042053 , Zm00025a034743
Brachypodium KQK19880 , KQJ93670 , KQK16829
Barley HORVU5Hr1G065420.8 , HORVU5Hr1G065420.9 , HORVU5Hr1G065420.1 , HORVU5Hr1G065420.2 , HORVU5Hr1G065420.3 , HORVU5Hr1G065420.5 , HORVU5Hr1G065420.6 , HORVU6Hr1G028790.2 , HORVU6Hr1G028790.3 , HORVU6Hr1G028790.1 , HORVU7Hr1G113850.4 , HORVU7Hr1G113850.1 , HORVU7Hr1G113850.3 , HORVU7Hr1G113850.2 , HORVU3Hr1G020210.2 , HORVU3Hr1G020210.3 , HORVU3Hr1G020210.1 , HORVU3Hr1G020210.4 , HORVU7Hr1G113830.3 , HORVU7Hr1G113830.2 , HORVU7Hr1G113830.1 , HORVU7Hr1G113830.4 , HORVU5Hr1G065420.12 , HORVU5Hr1G065420.10 , HORVU5Hr1G065420.11
Wheat TraesCS6A02G146900 , TraesCS6B02G175100 , TraesCS6B02G175100 , TraesCS7D02G497700 , TraesCS7B02G419400 , TraesCS5B02G224000 , TraesCS7D02G497800 , TraesCS7A02G509000 , TraesCS7A02G508700 , TraesCS1B02G434300 , TraesCS7B02G418600 , TraesCS5D02G232800 , TraesCS6D02G136200 , TraesCS6D02G136200 , TraesCS3B02G130000 , TraesCS3B02G130000 , TraesCS7D02G497400 , TraesCS7D02G497400 , TraesCS7B02G418500 , TraesCS7B02G418500 , TraesCS1D02G412500 , TraesCS7B02G418400 , TraesCS7D02G497300 , TraesCS7D02G497300 , TraesCS5B02G224100 , TraesCS7A02G508800 , TraesCS3D02G113300 , TraesCSU02G001200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G259600 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
2 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
4 Sobic.007G077200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
5 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
6 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.005G109000 cytochrome P450, putative, expressed -
8 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
10 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
11 Sobic.003G324400 Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed -
12 Sobic.001G259700 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
13 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.005G037000 cytochrome P450, putative, expressed -
15 Sobic.003G234000 DUF1645 domain containing protein, putative, expressed -
16 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
17 Sobic.006G263600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
19 Sobic.010G083600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
20 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -


Gene co-expression network
sample Sobic010G209100 Sobic010G209100 Sobic001G259600 Sobic001G259600 Sobic010G209100--Sobic001G259600 Sobic001G341600 Sobic001G341600 Sobic010G209100--Sobic001G341600 Sobic001G077400 Sobic001G077400 Sobic010G209100--Sobic001G077400 Sobic007G077200 Sobic007G077200 Sobic010G209100--Sobic007G077200 Sobic002G036100 Sobic002G036100 Sobic010G209100--Sobic002G036100 Sobic004G280900 Sobic004G280900 Sobic010G209100--Sobic004G280900 Sobic005G109000 Sobic005G109000 Sobic010G209100--Sobic005G109000 Sobic002G140300 Sobic002G140300 Sobic010G209100--Sobic002G140300 Sobic009G217500 Sobic009G217500 Sobic010G209100--Sobic009G217500 Sobic001G259700 Sobic001G259700 Sobic001G259600--Sobic001G259700 Sobic003G313800 Sobic003G313800 Sobic001G259600--Sobic003G313800 Sobic001G259600--Sobic010G209100 Sobic002G282300 Sobic002G282300 Sobic001G259600--Sobic002G282300 Sobic006G263600 Sobic006G263600 Sobic001G259600--Sobic006G263600 Sobic007G213800 Sobic007G213800 Sobic001G259600--Sobic007G213800 Sobic003G324400 Sobic003G324400 Sobic001G259600--Sobic003G324400 Sobic004G169200 Sobic004G169200 Sobic001G259600--Sobic004G169200 Sobic005G037000 Sobic005G037000 Sobic001G259600--Sobic005G037000 Sobic009G217600 Sobic009G217600 Sobic001G341600--Sobic009G217600 Sobic001G441100 Sobic001G441100 Sobic001G341600--Sobic001G441100 Sobic001G035000 Sobic001G035000 Sobic001G341600--Sobic001G035000 Sobic001G341600--Sobic001G077400 Sobic001G341600--Sobic004G280900 Sobic001G341600--Sobic002G140300 Sobic003G353800 Sobic003G353800 Sobic001G341600--Sobic003G353800 Sobic002G278500 Sobic002G278500 Sobic001G341600--Sobic002G278500 Sobic001G538866 Sobic001G538866 Sobic001G341600--Sobic001G538866 Sobic001G077400--Sobic004G280900 Sobic001G077400--Sobic005G037000 Sobic001G209800 Sobic001G209800 Sobic001G077400--Sobic001G209800 Sobic001G077400--Sobic001G441100 Sobic001G077400--Sobic009G217600 Sobic001G077400--Sobic001G035000 Sobic001G077400--Sobic002G036100 Sobic006G165100 Sobic006G165100 Sobic001G077400--Sobic006G165100 Sobic001G077400--Sobic001G341600 Sobic007G077200--Sobic001G259600 Sobic007G077100 Sobic007G077100 Sobic007G077200--Sobic007G077100 Sobic007G077200--Sobic010G209100 Sobic010G023200 Sobic010G023200 Sobic007G077200--Sobic010G023200 Sobic007G077200--Sobic009G217500 Sobic007G077200--Sobic003G324400 Sobic007G077200--Sobic001G035000 Sobic001G040200 Sobic001G040200 Sobic007G077200--Sobic001G040200 Sobic007G077200--Sobic006G263600 Sobic002G036100--Sobic001G077400 Sobic002G036100--Sobic004G280900 Sobic002G036100--Sobic001G538866 Sobic002G036100--Sobic006G165100 Sobic002G036100--Sobic002G140300 Sobic002G036100--Sobic001G259600 Sobic002G036100--Sobic003G313800 Sobic002G036150 Sobic002G036150 Sobic002G036100--Sobic002G036150 Sobic002G036100--Sobic001G040200 Sobic004G280900--Sobic001G077400 Sobic004G280900--Sobic005G037000 Sobic004G280900--Sobic009G217600 Sobic004G280900--Sobic001G209800 Sobic004G280900--Sobic001G441100 Sobic004G280900--Sobic002G036100 Sobic004G280900--Sobic002G140300 Sobic004G280900--Sobic001G538866 Sobic004G280900--Sobic001G341600 Sobic005G109000--Sobic010G209100 Sobic002G214800 Sobic002G214800 Sobic005G109000--Sobic002G214800 Sobic002G202100 Sobic002G202100 Sobic005G109000--Sobic002G202100 Sobic007G151100 Sobic007G151100 Sobic005G109000--Sobic007G151100 Sobic002G245800 Sobic002G245800 Sobic005G109000--Sobic002G245800 Sobic010G267600 Sobic010G267600 Sobic005G109000--Sobic010G267600 Sobic005G109000--Sobic001G259600 Sobic010G083600 Sobic010G083600 Sobic005G109000--Sobic010G083600 Sobic001G449700 Sobic001G449700 Sobic005G109000--Sobic001G449700 Sobic006G179500 Sobic006G179500 Sobic002G140300--Sobic006G179500 Sobic002G140300--Sobic001G040200 Sobic002G140300--Sobic006G165100 Sobic004G222500 Sobic004G222500 Sobic002G140300--Sobic004G222500 Sobic002G140300--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic002G140300--Sobic009G036100 Sobic006G183400 Sobic006G183400 Sobic002G140300--Sobic006G183400 Sobic002G140300--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G140300--Sobic009G247900 Sobic006G273800 Sobic006G273800 Sobic009G217500--Sobic006G273800 Sobic009G217500--Sobic007G077100 Sobic003G341100 Sobic003G341100 Sobic009G217500--Sobic003G341100 Sobic009G217500--Sobic010G023200 Sobic010G102000 Sobic010G102000 Sobic009G217500--Sobic010G102000 Sobic003G416500 Sobic003G416500 Sobic009G217500--Sobic003G416500 Sobic009G217500--Sobic001G341600 Sobic009G217500--Sobic001G035000 Sobic001G064900 Sobic001G064900 Sobic009G217500--Sobic001G064900
Octagon: transcription factors


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