Gene annotation
| Transcriptome id | Sobic.001G441100.1 |
|---|---|
| Synonym | Sb01g041450 |
| Functional annotation | immediate-early fungal elicitor protein CMPG1, putative, expressed |
| UniProt | C5WRK6 |
| Pfam | PF04564 |
| Panther DB | PTHR22849 PTHR22849:SF43 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity |
Orthologs (automatic annotation)
| TAIR | AT1G66160 : CYS, MET, PRO, and GLY protein 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g13740.1 : immediate-early fungal elicitor protein CMPG1, putative, expressed |
| MaizeGDB (Corn) | Zm00025a049380 , Zm00025a001507 |
| Brachypodium | KQK22640 |
| Barley | HORVU6Hr1G077120.1 , HORVU6Hr1G077120.2 , HORVU4Hr1G064070.1 |
| Wheat | - |
| Populus | - |
JBrowse
| Sobic.001G441100 |
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G035000 | ZOS3-22 - C2H2 zinc finger protein, expressed | - |
| 2 | Sobic.009G217600 | STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed | - |
| 3 | Sobic.001G077400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed | K01723: hydroperoxide dehydratase |
| 4 | Sobic.001G341600 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed | - |
| 5 | Sobic.005G037000 | cytochrome P450, putative, expressed | - |
| 6 | Sobic.004G280900 | zinc finger, C3HC4 type domain containing protein, expressed | - |
| 7 | Sobic.002G278500 | nodulin, putative, expressed | - |
| 8 | Sobic.001G209800 | harpin-induced protein 1 domain containing protein, expressed | - |
| 9 | Sobic.002G140300 | plastocyanin-like domain containing protein, putative, expressed | - |
| 10 | Sobic.007G126300 | spotted leaf 11, putative, expressed | - |
| 11 | Sobic.006G165100 | Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed | - |
| 12 | Sobic.006G267000 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed | - |
| 13 | Sobic.007G122500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 14 | Sobic.002G131800 | copine, putative, expressed | K16280: E3 ubiquitin-protein ligase RGLG |
| 15 | Sobic.003G353800 | avr9/Cf-9 rapidly elicited protein, putative, expressed | - |
| 16 | Sobic.002G335200 | expressed protein | - |
| 17 | Sobic.009G120800 | OsCML15 - Calmodulin-related calcium sensor protein, expressed | K13448: calcium-binding protein CML |
| 18 | Sobic.001G338600 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed | - |
| 19 | Sobic.002G294700 | Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed | - |
| 20 | Sobic.001G538866 | - | - |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
