Gene annotation
Transcriptome id Sobic.001G341600.1
Synonym Sb01g032820
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
tyrosine protein kinase domain containing protein, putative, expressed
UniProt C5WWP1
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF111
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G05940 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g29410.1 : tyrosine protein kinase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a017867 , Zm00025a049633 , Zm00025a052320 , Zm00025a023843 , Zm00025a011296 , Zm00025a029688 , Zm00025a012726 , Zm00025a030297 , Zm00025a047168 , Zm00025a040184 , Zm00025a042449 , Zm00025a048740 , Zm00025a037383 , Zm00025a025430 , Zm00025a039496 , Zm00025a056619 , Zm00025a029517 , Zm00025a032161 , Zm00025a002811
Brachypodium KQK19638 , KQJ88913 , KQK19114 , KQK21579 , KQK00546 , KQK01632 , KQK19122 , KQK19123 , KQK15277 , KQK05701 , KQK01265 , PNT73321 , KQK11777 , PNT69406
Barley HORVU1Hr1G083220.10 , HORVU1Hr1G083220.11 , HORVU1Hr1G083220.12 , HORVU3Hr1G017020.30 , HORVU1Hr1G004690.7 , HORVU1Hr1G004690.4 , HORVU1Hr1G004690.3 , HORVU1Hr1G004690.1 , HORVU1Hr1G004690.10 , HORVU1Hr1G004690.11 , HORVU4Hr1G066310.2 , HORVU4Hr1G066310.8 , HORVU1Hr1G004590.8 , HORVU4Hr1G066310.10 , HORVU1Hr1G083220.3 , HORVU1Hr1G083220.6 , HORVU1Hr1G083220.4 , HORVU1Hr1G083220.9 , HORVU4Hr1G066310.9 , HORVU1Hr1G004590.9 , HORVU1Hr1G004590.1 , HORVU1Hr1G004590.3 , HORVU1Hr1G004590.2 , HORVU1Hr1G004590.5 , HORVU1Hr1G004590.4 , HORVU1Hr1G004590.7 , HORVU1Hr1G004590.6 , HORVU1Hr1G004590.10 , HORVU3Hr1G017020.19 , HORVU3Hr1G017020.18 , HORVU3Hr1G017020.17 , HORVU3Hr1G017020.14 , HORVU3Hr1G017020.13 , HORVU3Hr1G017020.12 , HORVU3Hr1G017020.11 , HORVU3Hr1G017020.10 , HORVU3Hr1G017020.33 , HORVU3Hr1G017020.32 , HORVU5Hr1G107330.2 , HORVU3Hr1G064110.9 , HORVU3Hr1G064110.8 , HORVU3Hr1G064110.7 , HORVU3Hr1G064110.6 , HORVU3Hr1G064110.1 , HORVU3Hr1G064110.3 , HORVU3Hr1G064110.2 , HORVU3Hr1G017020.31 , HORVU3Hr1G017020.34 , HORVU4Hr1G025070.2 , HORVU4Hr1G025070.3 , HORVU4Hr1G025070.1 , HORVU3Hr1G064110.11 , HORVU3Hr1G064110.12 , HORVU3Hr1G064110.15 , HORVU3Hr1G064110.14 , HORVU4Hr1G066310.11 , HORVU5Hr1G107330.1 , HORVU4Hr1G016080.1 , HORVU3Hr1G017020.26 , HORVU3Hr1G017020.27 , HORVU3Hr1G017020.25 , HORVU3Hr1G017020.20 , HORVU3Hr1G017020.28 , HORVU3Hr1G017020.29 , HORVU3Hr1G017020.7 , HORVU3Hr1G017020.6 , HORVU3Hr1G017020.5 , HORVU3Hr1G017020.4 , HORVU3Hr1G017020.3 , HORVU3Hr1G017020.2 , HORVU3Hr1G017020.9
Wheat TraesCS6A02G336600 , TraesCS1A02G031200 , TraesCS1D02G032600 , TraesCS2A02G508700 , TraesCS3A02G530200 , TraesCS2B02G197000 , TraesCS3D02G095200 , TraesCS3D02G048000 , TraesCS1B02G038800 , TraesCS4D02G238900 , TraesCS7D02G318600 , TraesCS7D02G318600 , TraesCS4B02G238700 , TraesCSU02G047400 , TraesCS3D02G535700 , TraesCS3A02G262100 , TraesCS3A02G262100 , TraesCS3A02G262100 , TraesCS3A02G262100 , TraesCS6D02G027700 , TraesCS3B02G295400 , TraesCS7B02G448200 , TraesCS4A02G062000 , TraesCS5A02G084200 , TraesCS5B02G069900 , TraesCS5B02G089800 , TraesCSU02G047400 , TraesCS3B02G295400 , TraesCS3B02G295400 , TraesCS3B02G295400 , TraesCS3D02G262200 , TraesCS3D02G262200 , TraesCS5D02G096200 , TraesCS6B02G033300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
2 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
3 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
4 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
5 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -
8 Sobic.002G278500 nodulin, putative, expressed -
9 Sobic.001G538866 - -
10 Sobic.008G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
12 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
13 Sobic.010G209100 WRKY28, expressed -
14 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
15 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
17 Sobic.007G057700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
18 Sobic.005G037000 cytochrome P450, putative, expressed -
19 Sobic.007G126300 spotted leaf 11, putative, expressed -
20 Sobic.002G131800 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG


Gene co-expression network
sample Sobic001G341600 Sobic001G341600 Sobic009G217600 Sobic009G217600 Sobic001G341600--Sobic009G217600 Sobic001G441100 Sobic001G441100 Sobic001G341600--Sobic001G441100 Sobic001G035000 Sobic001G035000 Sobic001G341600--Sobic001G035000 Sobic001G077400 Sobic001G077400 Sobic001G341600--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic001G341600--Sobic004G280900 Sobic002G140300 Sobic002G140300 Sobic001G341600--Sobic002G140300 Sobic003G353800 Sobic003G353800 Sobic001G341600--Sobic003G353800 Sobic002G278500 Sobic002G278500 Sobic001G341600--Sobic002G278500 Sobic001G538866 Sobic001G538866 Sobic001G341600--Sobic001G538866 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic009G217600--Sobic001G077400 Sobic009G217600--Sobic001G035000 Sobic009G217600--Sobic004G280900 Sobic001G209800 Sobic001G209800 Sobic009G217600--Sobic001G209800 Sobic005G037000 Sobic005G037000 Sobic009G217600--Sobic005G037000 Sobic009G217600--Sobic003G353800 Sobic009G217600--Sobic002G278500 Sobic001G441100--Sobic001G035000 Sobic001G441100--Sobic009G217600 Sobic001G441100--Sobic001G077400 Sobic001G441100--Sobic001G341600 Sobic001G441100--Sobic005G037000 Sobic001G441100--Sobic004G280900 Sobic001G441100--Sobic002G278500 Sobic001G441100--Sobic001G209800 Sobic001G441100--Sobic002G140300 Sobic001G035000--Sobic001G441100 Sobic001G035000--Sobic001G077400 Sobic001G035000--Sobic009G217600 Sobic001G035000--Sobic005G037000 Sobic001G035000--Sobic001G341600 Sobic001G035000--Sobic001G209800 Sobic007G122500 Sobic007G122500 Sobic001G035000--Sobic007G122500 Sobic007G126300 Sobic007G126300 Sobic001G035000--Sobic007G126300 Sobic001G035000--Sobic004G280900 Sobic001G077400--Sobic004G280900 Sobic001G077400--Sobic005G037000 Sobic001G077400--Sobic001G209800 Sobic001G077400--Sobic001G441100 Sobic001G077400--Sobic009G217600 Sobic001G077400--Sobic001G035000 Sobic002G036100 Sobic002G036100 Sobic001G077400--Sobic002G036100 Sobic006G165100 Sobic006G165100 Sobic001G077400--Sobic006G165100 Sobic001G077400--Sobic001G341600 Sobic004G280900--Sobic001G077400 Sobic004G280900--Sobic005G037000 Sobic004G280900--Sobic009G217600 Sobic004G280900--Sobic001G209800 Sobic004G280900--Sobic001G441100 Sobic004G280900--Sobic002G036100 Sobic004G280900--Sobic002G140300 Sobic004G280900--Sobic001G538866 Sobic004G280900--Sobic001G341600 Sobic006G179500 Sobic006G179500 Sobic002G140300--Sobic006G179500 Sobic001G040200 Sobic001G040200 Sobic002G140300--Sobic001G040200 Sobic002G140300--Sobic006G165100 Sobic004G222500 Sobic004G222500 Sobic002G140300--Sobic004G222500 Sobic002G140300--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic002G140300--Sobic009G036100 Sobic006G183400 Sobic006G183400 Sobic002G140300--Sobic006G183400 Sobic003G324400 Sobic003G324400 Sobic002G140300--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G140300--Sobic009G247900 Sobic003G353800--Sobic009G217600 Sobic003G353800--Sobic001G341600 Sobic003G353800--Sobic001G441100 Sobic003G353800--Sobic001G035000 Sobic003G353800--Sobic002G278500 Sobic003G353800--Sobic001G077400 Sobic009G217500 Sobic009G217500 Sobic003G353800--Sobic009G217500 Sobic008G042900 Sobic008G042900 Sobic003G353800--Sobic008G042900 Sobic003G416500 Sobic003G416500 Sobic003G353800--Sobic003G416500 Sobic004G228900 Sobic004G228900 Sobic002G278500--Sobic004G228900 Sobic002G278500--Sobic001G441100 Sobic001G338600 Sobic001G338600 Sobic002G278500--Sobic001G338600 Sobic005G122500 Sobic005G122500 Sobic002G278500--Sobic005G122500 Sobic002G278500--Sobic009G217600 Sobic002G294700 Sobic002G294700 Sobic002G278500--Sobic002G294700 Sobic002G282300 Sobic002G282300 Sobic002G278500--Sobic002G282300 Sobic002G278500--Sobic001G341600 Sobic008G177800 Sobic008G177800 Sobic002G278500--Sobic008G177800 Sobic001G538866--Sobic002G140300 Sobic001G538866--Sobic001G040200 Sobic001G538866--Sobic004G280900 Sobic001G538866--Sobic002G036100 Sobic001G538866--Sobic003G324400 Sobic001G538866--Sobic006G165100 Sobic001G538866--Sobic001G077400 Sobic007G151100 Sobic007G151100 Sobic001G538866--Sobic007G151100 Sobic009G200700 Sobic009G200700 Sobic001G538866--Sobic009G200700
Octagon: transcription factors


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