Gene annotation
Transcriptome id Sobic.003G353800.1
Synonym Sb03g039620
Functional annotation avr9/Cf-9 rapidly elicited protein, putative, expressed
UniProt C5XPQ9
Pfam PF11961 PF05003
Panther DB PTHR31371 PTHR31371:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G23160 : Protein of unknown function (DUF668)
RAP-DB (Rice) LOC_Os01g62670.1 : avr9/Cf-9 rapidly elicited protein, putative, expressed
MaizeGDB (Corn) Zm00025a026877 , Zm00025a039667
Brachypodium KQK10543
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
2 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
4 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
5 Sobic.002G278500 nodulin, putative, expressed -
6 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
7 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
8 Sobic.008G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
9 Sobic.003G416500 SRC2 protein, putative, expressed -
10 Sobic.001G489500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.006G273800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
12 Sobic.003G361100 hs1, putative, expressed -
13 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.001G192800 AAA-type ATPase family protein, putative, expressed -
15 Sobic.010G209100 WRKY28, expressed -
16 Sobic.007G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.007G057700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
18 Sobic.005G037000 cytochrome P450, putative, expressed -
19 Sobic.007G077100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
20 Sobic.006G184400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family


Gene co-expression network
sample Sobic003G353800 Sobic003G353800 Sobic009G217600 Sobic009G217600 Sobic003G353800--Sobic009G217600 Sobic001G341600 Sobic001G341600 Sobic003G353800--Sobic001G341600 Sobic001G441100 Sobic001G441100 Sobic003G353800--Sobic001G441100 Sobic001G035000 Sobic001G035000 Sobic003G353800--Sobic001G035000 Sobic002G278500 Sobic002G278500 Sobic003G353800--Sobic002G278500 Sobic001G077400 Sobic001G077400 Sobic003G353800--Sobic001G077400 Sobic009G217500 Sobic009G217500 Sobic003G353800--Sobic009G217500 Sobic008G042900 Sobic008G042900 Sobic003G353800--Sobic008G042900 Sobic003G416500 Sobic003G416500 Sobic003G353800--Sobic003G416500 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic009G217600--Sobic001G077400 Sobic009G217600--Sobic001G035000 Sobic004G280900 Sobic004G280900 Sobic009G217600--Sobic004G280900 Sobic001G209800 Sobic001G209800 Sobic009G217600--Sobic001G209800 Sobic005G037000 Sobic005G037000 Sobic009G217600--Sobic005G037000 Sobic009G217600--Sobic003G353800 Sobic009G217600--Sobic002G278500 Sobic001G341600--Sobic009G217600 Sobic001G341600--Sobic001G441100 Sobic001G341600--Sobic001G035000 Sobic001G341600--Sobic001G077400 Sobic001G341600--Sobic004G280900 Sobic002G140300 Sobic002G140300 Sobic001G341600--Sobic002G140300 Sobic001G341600--Sobic003G353800 Sobic001G341600--Sobic002G278500 Sobic001G538866 Sobic001G538866 Sobic001G341600--Sobic001G538866 Sobic001G441100--Sobic001G035000 Sobic001G441100--Sobic009G217600 Sobic001G441100--Sobic001G077400 Sobic001G441100--Sobic001G341600 Sobic001G441100--Sobic005G037000 Sobic001G441100--Sobic004G280900 Sobic001G441100--Sobic002G278500 Sobic001G441100--Sobic001G209800 Sobic001G441100--Sobic002G140300 Sobic001G035000--Sobic001G441100 Sobic001G035000--Sobic001G077400 Sobic001G035000--Sobic009G217600 Sobic001G035000--Sobic005G037000 Sobic001G035000--Sobic001G341600 Sobic001G035000--Sobic001G209800 Sobic007G122500 Sobic007G122500 Sobic001G035000--Sobic007G122500 Sobic007G126300 Sobic007G126300 Sobic001G035000--Sobic007G126300 Sobic001G035000--Sobic004G280900 Sobic004G228900 Sobic004G228900 Sobic002G278500--Sobic004G228900 Sobic002G278500--Sobic001G441100 Sobic001G338600 Sobic001G338600 Sobic002G278500--Sobic001G338600 Sobic005G122500 Sobic005G122500 Sobic002G278500--Sobic005G122500 Sobic002G278500--Sobic009G217600 Sobic002G294700 Sobic002G294700 Sobic002G278500--Sobic002G294700 Sobic002G282300 Sobic002G282300 Sobic002G278500--Sobic002G282300 Sobic002G278500--Sobic001G341600 Sobic008G177800 Sobic008G177800 Sobic002G278500--Sobic008G177800 Sobic001G077400--Sobic004G280900 Sobic001G077400--Sobic005G037000 Sobic001G077400--Sobic001G209800 Sobic001G077400--Sobic001G441100 Sobic001G077400--Sobic009G217600 Sobic001G077400--Sobic001G035000 Sobic002G036100 Sobic002G036100 Sobic001G077400--Sobic002G036100 Sobic006G165100 Sobic006G165100 Sobic001G077400--Sobic006G165100 Sobic001G077400--Sobic001G341600 Sobic006G273800 Sobic006G273800 Sobic009G217500--Sobic006G273800 Sobic007G077100 Sobic007G077100 Sobic009G217500--Sobic007G077100 Sobic003G341100 Sobic003G341100 Sobic009G217500--Sobic003G341100 Sobic010G023200 Sobic010G023200 Sobic009G217500--Sobic010G023200 Sobic010G102000 Sobic010G102000 Sobic009G217500--Sobic010G102000 Sobic009G217500--Sobic003G416500 Sobic009G217500--Sobic001G341600 Sobic009G217500--Sobic001G035000 Sobic001G064900 Sobic001G064900 Sobic009G217500--Sobic001G064900 Sobic008G042900--Sobic001G341600 Sobic008G042900--Sobic009G217600 Sobic008G042900--Sobic001G441100 Sobic008G042900--Sobic002G140300 Sobic002G131800 Sobic002G131800 Sobic008G042900--Sobic002G131800 Sobic008G042900--Sobic004G280900 Sobic009G027900 Sobic009G027900 Sobic008G042900--Sobic009G027900 Sobic006G066200 Sobic006G066200 Sobic008G042900--Sobic006G066200 Sobic008G042900--Sobic001G077400 Sobic001G489500 Sobic001G489500 Sobic003G416500--Sobic001G489500 Sobic003G416500--Sobic010G023200 Sobic006G259000 Sobic006G259000 Sobic003G416500--Sobic006G259000 Sobic003G416500--Sobic007G077100 Sobic003G416500--Sobic009G217500 Sobic003G416500--Sobic006G273800 Sobic009G120800 Sobic009G120800 Sobic003G416500--Sobic009G120800 Sobic002G323900 Sobic002G323900 Sobic003G416500--Sobic002G323900 Sobic010G105300 Sobic010G105300 Sobic003G416500--Sobic010G105300
Octagon: transcription factors


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