Gene annotation
Transcriptome id Sobic.003G361100.1
Synonym Sb03g040300
Functional annotation hs1, putative, expressed
UniProt A0A1B6Q746
Pfam PF07231 PF07014
Panther DB PTHR34795
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006952; defense response


Orthologs (automatic annotation)
TAIR AT2G40000 : ortholog of sugar beet HS1 PRO-1 2
RAP-DB (Rice) LOC_Os01g63690.1 : hs1, putative, expressed
MaizeGDB (Corn) Zm00025a039607 , Zm00025a026810
Brachypodium KQK10640
Barley HORVU3Hr1G084830.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G361100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
2 Sobic.001G192800 AAA-type ATPase family protein, putative, expressed -
3 Sobic.009G204100 expressed protein -
4 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
5 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
6 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -
7 Sobic.006G184400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
8 Sobic.005G037000 cytochrome P450, putative, expressed -
9 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
11 Sobic.009G044400 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
12 Sobic.007G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.009G120800 OsCML15 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
14 Sobic.006G273800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
15 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
16 Sobic.003G416500 SRC2 protein, putative, expressed -
17 Sobic.001G398500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@long cell-linked locus protein, putative, expressed -
18 Sobic.004G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
19 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
20 Sobic.001G489500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G361100 Sobic003G361100 Sobic001G035000 Sobic001G035000 Sobic003G361100--Sobic001G035000 Sobic001G192800 Sobic001G192800 Sobic003G361100--Sobic001G192800 Sobic009G204100 Sobic009G204100 Sobic003G361100--Sobic009G204100 Sobic009G217600 Sobic009G217600 Sobic003G361100--Sobic009G217600 Sobic001G441100 Sobic001G441100 Sobic003G361100--Sobic001G441100 Sobic003G353800 Sobic003G353800 Sobic003G361100--Sobic003G353800 Sobic006G184400 Sobic006G184400 Sobic003G361100--Sobic006G184400 Sobic005G037000 Sobic005G037000 Sobic003G361100--Sobic005G037000 Sobic001G209800 Sobic001G209800 Sobic003G361100--Sobic001G209800 Sobic001G035000--Sobic001G441100 Sobic001G077400 Sobic001G077400 Sobic001G035000--Sobic001G077400 Sobic001G035000--Sobic009G217600 Sobic001G035000--Sobic005G037000 Sobic001G341600 Sobic001G341600 Sobic001G035000--Sobic001G341600 Sobic001G035000--Sobic001G209800 Sobic007G122500 Sobic007G122500 Sobic001G035000--Sobic007G122500 Sobic007G126300 Sobic007G126300 Sobic001G035000--Sobic007G126300 Sobic004G280900 Sobic004G280900 Sobic001G035000--Sobic004G280900 Sobic001G196900 Sobic001G196900 Sobic001G192800--Sobic001G196900 Sobic001G192800--Sobic009G217600 Sobic001G192800--Sobic001G035000 Sobic009G217500 Sobic009G217500 Sobic001G192800--Sobic009G217500 Sobic003G341100 Sobic003G341100 Sobic001G192800--Sobic003G341100 Sobic001G192800--Sobic003G361100 Sobic006G273800 Sobic006G273800 Sobic001G192800--Sobic006G273800 Sobic001G192800--Sobic006G184400 Sobic001G192800--Sobic001G341600 Sobic009G204100--Sobic001G077400 Sobic009G204100--Sobic005G037000 Sobic009G204100--Sobic003G361100 Sobic010G209100 Sobic010G209100 Sobic009G204100--Sobic010G209100 Sobic006G165100 Sobic006G165100 Sobic009G204100--Sobic006G165100 Sobic009G204100--Sobic001G441100 Sobic009G204100--Sobic004G280900 Sobic009G204100--Sobic001G035000 Sobic003G324400 Sobic003G324400 Sobic009G204100--Sobic003G324400 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic009G217600--Sobic001G077400 Sobic009G217600--Sobic001G035000 Sobic009G217600--Sobic004G280900 Sobic009G217600--Sobic001G209800 Sobic009G217600--Sobic005G037000 Sobic009G217600--Sobic003G353800 Sobic002G278500 Sobic002G278500 Sobic009G217600--Sobic002G278500 Sobic001G441100--Sobic001G035000 Sobic001G441100--Sobic009G217600 Sobic001G441100--Sobic001G077400 Sobic001G441100--Sobic001G341600 Sobic001G441100--Sobic005G037000 Sobic001G441100--Sobic004G280900 Sobic001G441100--Sobic002G278500 Sobic001G441100--Sobic001G209800 Sobic002G140300 Sobic002G140300 Sobic001G441100--Sobic002G140300 Sobic003G353800--Sobic009G217600 Sobic003G353800--Sobic001G341600 Sobic003G353800--Sobic001G441100 Sobic003G353800--Sobic001G035000 Sobic003G353800--Sobic002G278500 Sobic003G353800--Sobic001G077400 Sobic003G353800--Sobic009G217500 Sobic008G042900 Sobic008G042900 Sobic003G353800--Sobic008G042900 Sobic003G416500 Sobic003G416500 Sobic003G353800--Sobic003G416500 Sobic004G305000 Sobic004G305000 Sobic006G184400--Sobic004G305000 Sobic010G076600 Sobic010G076600 Sobic006G184400--Sobic010G076600 Sobic002G217100 Sobic002G217100 Sobic006G184400--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic006G184400--Sobic006G210300 Sobic001G398500 Sobic001G398500 Sobic006G184400--Sobic001G398500 Sobic006G184400--Sobic001G192800 Sobic006G184400--Sobic003G361100 Sobic009G071800 Sobic009G071800 Sobic006G184400--Sobic009G071800 Sobic006G184400--Sobic003G353800 Sobic005G037000--Sobic001G077400 Sobic005G037000--Sobic004G280900 Sobic005G037000--Sobic001G441100 Sobic005G037000--Sobic001G035000 Sobic005G037000--Sobic001G209800 Sobic005G037000--Sobic009G217600 Sobic005G037000--Sobic007G126300 Sobic001G259600 Sobic001G259600 Sobic005G037000--Sobic001G259600 Sobic005G037000--Sobic006G165100 Sobic001G209800--Sobic001G077400 Sobic001G209800--Sobic004G280900 Sobic001G209800--Sobic009G217600 Sobic001G209800--Sobic001G035000 Sobic001G209800--Sobic005G037000 Sobic001G209800--Sobic001G441100 Sobic001G209800--Sobic010G076600 Sobic001G209800--Sobic001G341600 Sobic006G274300 Sobic006G274300 Sobic001G209800--Sobic006G274300
Octagon: transcription factors


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