Gene annotation
| Transcriptome id | Sobic.009G204100.1 |
|---|---|
| Synonym | Sb09g026130, OXS3, ATOXS3 |
| Functional annotation | expressed protein |
| UniProt | C5Z1D8 |
| Pfam | - |
| Panther DB | PTHR33172:SF13 PTHR33172 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT5G56550 : oxidative stress 3 |
|---|---|
| RAP-DB (Rice) | LOC_Os05g44900.1 : expressed protein |
| MaizeGDB (Corn) | Zm00025a037987 , Zm00025a044309 |
| Brachypodium | KQK05307 |
| Barley | HORVU1Hr1G075580.4 , HORVU1Hr1G075580.2 , HORVU1Hr1G075580.3 , HORVU1Hr1G075580.1 |
| Wheat | TraesCS1D02G345500 , TraesCS1A02G343700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G077400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed | K01723: hydroperoxide dehydratase |
| 2 | Sobic.005G037000 | cytochrome P450, putative, expressed | - |
| 3 | Sobic.003G361100 | hs1, putative, expressed | - |
| 4 | Sobic.010G209100 | WRKY28, expressed | - |
| 5 | Sobic.006G165100 | Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed | - |
| 6 | Sobic.001G441100 | immediate-early fungal elicitor protein CMPG1, putative, expressed | - |
| 7 | Sobic.004G280900 | zinc finger, C3HC4 type domain containing protein, expressed | - |
| 8 | Sobic.001G035000 | ZOS3-22 - C2H2 zinc finger protein, expressed | - |
| 9 | Sobic.003G324400 | Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed | - |
| 10 | Sobic.007G126300 | spotted leaf 11, putative, expressed | - |
| 11 | Sobic.009G217600 | STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed | - |
| 12 | Sobic.001G259600 | tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed | K13464: jasmonate ZIM domain-containing protein |
| 13 | Sobic.007G212200 | AN1-like zinc finger domain containing protein, expressed | - |
| 14 | Sobic.001G341600 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed | - |
| 15 | Sobic.002G354900 | "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@gibberellin response modulator protein, putative, expressed | - |
| 16 | Sobic.009G217500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed | - |
| 17 | Sobic.001G192800 | AAA-type ATPase family protein, putative, expressed | - |
| 18 | Sobic.002G036100 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed | - |
| 19 | Sobic.001G209800 | harpin-induced protein 1 domain containing protein, expressed | - |
| 20 | Sobic.001G538866 | - | - |
Gene co-expression network
Octagon: transcription factors
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