Gene annotation
Transcriptome id Sobic.007G212200.5,Sobic.007G212200.3,Sobic.007G212200.4
Synonym Sb07g027940
Functional annotation AN1-like zinc finger domain containing protein, expressed
UniProt C5YIU5
Pfam PF01754 PF01428 PF01428 PF01754
Panther DB PTHR10634 PTHR10634:SF34 PTHR10634:SF34 PTHR10634
NCBI CDD KOG3173; Predicted Zn-finger protein
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0003677DNA binding GO:0003677DNA binding GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G12630 : A20/AN1-like zinc finger family protein
RAP-DB (Rice) LOC_Os08g39450.1 : AN1-like zinc finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a014199 , Zm00025a047436 , Zm00025a005067
Brachypodium KQJ98899
Barley HORVU7Hr1G050270.3 , HORVU7Hr1G050270.2 , HORVU7Hr1G050270.1 , HORVU7Hr1G050270.4 , HORVU5Hr1G072920.1
Wheat -
Populus -


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cDNA sequences
Sobic.007G212200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G354900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@gibberellin response modulator protein, putative, expressed -
2 Sobic.007G011000 synaptobrevin-related family protein, putative, expressed -
3 Sobic.009G204100 expressed protein -
4 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
5 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
6 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
7 Sobic.003G361100 hs1, putative, expressed -
8 Sobic.006G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
9 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -
10 Sobic.010G209100 WRKY28, expressed -
11 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
12 Sobic.001G192800 AAA-type ATPase family protein, putative, expressed -
13 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
14 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
15 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
16 Sobic.001G538866 - -
17 Sobic.001G386000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
18 Sobic.010G228000 Protein kinase domain containing protein, expressed -
19 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
20 Sobic.002G405600 early response to dehydration 15, putative, expressed -


Gene co-expression network
sample Sobic007G212200 Sobic007G212200 Sobic002G354900 Sobic002G354900 Sobic007G212200--Sobic002G354900 Sobic007G011000 Sobic007G011000 Sobic007G212200--Sobic007G011000 Sobic009G204100 Sobic009G204100 Sobic007G212200--Sobic009G204100 Sobic002G118600 Sobic002G118600 Sobic007G212200--Sobic002G118600 Sobic002G245800 Sobic002G245800 Sobic007G212200--Sobic002G245800 Sobic001G410100 Sobic001G410100 Sobic007G212200--Sobic001G410100 Sobic003G361100 Sobic003G361100 Sobic007G212200--Sobic003G361100 Sobic006G089300 Sobic006G089300 Sobic007G212200--Sobic006G089300 Sobic003G353800 Sobic003G353800 Sobic007G212200--Sobic003G353800 Sobic002G294700 Sobic002G294700 Sobic002G354900--Sobic002G294700 Sobic002G405600 Sobic002G405600 Sobic002G354900--Sobic002G405600 Sobic002G374100 Sobic002G374100 Sobic002G354900--Sobic002G374100 Sobic003G324400 Sobic003G324400 Sobic002G354900--Sobic003G324400 Sobic002G354900--Sobic002G245800 Sobic010G246000 Sobic010G246000 Sobic002G354900--Sobic010G246000 Sobic009G129000 Sobic009G129000 Sobic002G354900--Sobic009G129000 Sobic001G538866 Sobic001G538866 Sobic002G354900--Sobic001G538866 Sobic009G217600 Sobic009G217600 Sobic002G354900--Sobic009G217600 Sobic007G011000--Sobic002G118600 Sobic002G330300 Sobic002G330300 Sobic007G011000--Sobic002G330300 Sobic010G228000 Sobic010G228000 Sobic007G011000--Sobic010G228000 Sobic007G011000--Sobic007G212200 Sobic004G280800 Sobic004G280800 Sobic007G011000--Sobic004G280800 Sobic003G425200 Sobic003G425200 Sobic007G011000--Sobic003G425200 Sobic007G011000--Sobic002G354900 Sobic010G041700 Sobic010G041700 Sobic007G011000--Sobic010G041700 Sobic004G025000 Sobic004G025000 Sobic007G011000--Sobic004G025000 Sobic001G077400 Sobic001G077400 Sobic009G204100--Sobic001G077400 Sobic005G037000 Sobic005G037000 Sobic009G204100--Sobic005G037000 Sobic009G204100--Sobic003G361100 Sobic010G209100 Sobic010G209100 Sobic009G204100--Sobic010G209100 Sobic006G165100 Sobic006G165100 Sobic009G204100--Sobic006G165100 Sobic001G441100 Sobic001G441100 Sobic009G204100--Sobic001G441100 Sobic004G280900 Sobic004G280900 Sobic009G204100--Sobic004G280900 Sobic001G035000 Sobic001G035000 Sobic009G204100--Sobic001G035000 Sobic009G204100--Sobic003G324400 Sobic001G147200 Sobic001G147200 Sobic002G118600--Sobic001G147200 Sobic001G341600 Sobic001G341600 Sobic002G118600--Sobic001G341600 Sobic003G341100 Sobic003G341100 Sobic002G118600--Sobic003G341100 Sobic002G118600--Sobic010G228000 Sobic002G118600--Sobic002G374100 Sobic001G290400 Sobic001G290400 Sobic002G118600--Sobic001G290400 Sobic002G118600--Sobic007G011000 Sobic002G118600--Sobic001G538866 Sobic006G228300 Sobic006G228300 Sobic002G118600--Sobic006G228300 Sobic002G245800--Sobic002G405600 Sobic001G040200 Sobic001G040200 Sobic002G245800--Sobic001G040200 Sobic002G245800--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G245800--Sobic009G247900 Sobic001G422900 Sobic001G422900 Sobic002G245800--Sobic001G422900 Sobic009G023200 Sobic009G023200 Sobic002G245800--Sobic009G023200 Sobic001G095300 Sobic001G095300 Sobic002G245800--Sobic001G095300 Sobic002G140300 Sobic002G140300 Sobic002G245800--Sobic002G140300 Sobic006G179500 Sobic006G179500 Sobic002G245800--Sobic006G179500 Sobic001G287600 Sobic001G287600 Sobic001G410100--Sobic001G287600 Sobic002G207300 Sobic002G207300 Sobic001G410100--Sobic002G207300 Sobic001G410100--Sobic003G341100 Sobic001G410100--Sobic007G011000 Sobic009G100500 Sobic009G100500 Sobic001G410100--Sobic009G100500 Sobic001G410100--Sobic002G118600 Sobic009G044400 Sobic009G044400 Sobic001G410100--Sobic009G044400 Sobic001G410100--Sobic007G212200 Sobic004G065900 Sobic004G065900 Sobic001G410100--Sobic004G065900 Sobic003G361100--Sobic001G035000 Sobic001G192800 Sobic001G192800 Sobic003G361100--Sobic001G192800 Sobic003G361100--Sobic009G204100 Sobic003G361100--Sobic009G217600 Sobic003G361100--Sobic001G441100 Sobic003G361100--Sobic003G353800 Sobic006G184400 Sobic006G184400 Sobic003G361100--Sobic006G184400 Sobic003G361100--Sobic005G037000 Sobic001G209800 Sobic001G209800 Sobic003G361100--Sobic001G209800 Sobic006G089300--Sobic001G040200 Sobic002G359300 Sobic002G359300 Sobic006G089300--Sobic002G359300 Sobic006G089300--Sobic006G179500 Sobic006G089300--Sobic006G228300 Sobic006G089300--Sobic001G538866 Sobic006G089300--Sobic002G140300 Sobic010G200700 Sobic010G200700 Sobic006G089300--Sobic010G200700 Sobic002G036100 Sobic002G036100 Sobic006G089300--Sobic002G036100 Sobic007G151100 Sobic007G151100 Sobic006G089300--Sobic007G151100 Sobic003G353800--Sobic009G217600 Sobic003G353800--Sobic001G341600 Sobic003G353800--Sobic001G441100 Sobic003G353800--Sobic001G035000 Sobic002G278500 Sobic002G278500 Sobic003G353800--Sobic002G278500 Sobic003G353800--Sobic001G077400 Sobic009G217500 Sobic009G217500 Sobic003G353800--Sobic009G217500 Sobic008G042900 Sobic008G042900 Sobic003G353800--Sobic008G042900 Sobic003G416500 Sobic003G416500 Sobic003G353800--Sobic003G416500
Octagon: transcription factors


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