Gene annotation
Transcriptome id Sobic.003G387200.1
Synonym
Functional annotation -
UniProt A0A1B6Q7J8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G267000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.003G323700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSub6 - Putative Subtilisin homologue, expressed -
3 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
4 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
5 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
6 Sobic.006G148000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.003G430400 OsCML31 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
9 Sobic.007G057700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
10 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -
11 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
12 Sobic.006G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@prephenate dehydratase domain containing protein, expressed K05359: ADT, arogenate/prephenate dehydratase
13 Sobic.004G222500 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
14 Sobic.001G329800 allene oxide cyclase 4, chloroplast precursor, putative, expressed K10525: allene oxide cyclase
15 Sobic.003G349600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-14 - C2H2 zinc finger protein, expressed -
16 Sobic.009G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
17 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
18 Sobic.001G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
19 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
20 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -


Gene co-expression network
sample Sobic003G387200 Sobic003G387200 Sobic006G267000 Sobic006G267000 Sobic003G387200--Sobic006G267000 Sobic003G323700 Sobic003G323700 Sobic003G387200--Sobic003G323700 Sobic001G441100 Sobic001G441100 Sobic003G387200--Sobic001G441100 Sobic001G341600 Sobic001G341600 Sobic003G387200--Sobic001G341600 Sobic001G035000 Sobic001G035000 Sobic003G387200--Sobic001G035000 Sobic006G148000 Sobic006G148000 Sobic003G387200--Sobic006G148000 Sobic002G140300 Sobic002G140300 Sobic003G387200--Sobic002G140300 Sobic003G430400 Sobic003G430400 Sobic003G387200--Sobic003G430400 Sobic007G057700 Sobic007G057700 Sobic003G387200--Sobic007G057700 Sobic006G267000--Sobic003G387200 Sobic006G267000--Sobic001G441100 Sobic006G267000--Sobic001G035000 Sobic006G267000--Sobic006G148000 Sobic004G283500 Sobic004G283500 Sobic006G267000--Sobic004G283500 Sobic002G278500 Sobic002G278500 Sobic006G267000--Sobic002G278500 Sobic001G495132 Sobic001G495132 Sobic006G267000--Sobic001G495132 Sobic006G267000--Sobic001G341600 Sobic009G217600 Sobic009G217600 Sobic006G267000--Sobic009G217600 Sobic003G323700--Sobic002G140300 Sobic009G036100 Sobic009G036100 Sobic003G323700--Sobic009G036100 Sobic003G323700--Sobic003G387200 Sobic004G222500 Sobic004G222500 Sobic003G323700--Sobic004G222500 Sobic001G329800 Sobic001G329800 Sobic003G323700--Sobic001G329800 Sobic006G066200 Sobic006G066200 Sobic003G323700--Sobic006G066200 Sobic003G323700--Sobic001G441100 Sobic003G323700--Sobic003G430400 Sobic002G220000 Sobic002G220000 Sobic003G323700--Sobic002G220000 Sobic001G441100--Sobic001G035000 Sobic001G441100--Sobic009G217600 Sobic001G077400 Sobic001G077400 Sobic001G441100--Sobic001G077400 Sobic001G441100--Sobic001G341600 Sobic005G037000 Sobic005G037000 Sobic001G441100--Sobic005G037000 Sobic004G280900 Sobic004G280900 Sobic001G441100--Sobic004G280900 Sobic001G441100--Sobic002G278500 Sobic001G209800 Sobic001G209800 Sobic001G441100--Sobic001G209800 Sobic001G441100--Sobic002G140300 Sobic001G341600--Sobic009G217600 Sobic001G341600--Sobic001G441100 Sobic001G341600--Sobic001G035000 Sobic001G341600--Sobic001G077400 Sobic001G341600--Sobic004G280900 Sobic001G341600--Sobic002G140300 Sobic003G353800 Sobic003G353800 Sobic001G341600--Sobic003G353800 Sobic001G341600--Sobic002G278500 Sobic001G538866 Sobic001G538866 Sobic001G341600--Sobic001G538866 Sobic001G035000--Sobic001G441100 Sobic001G035000--Sobic001G077400 Sobic001G035000--Sobic009G217600 Sobic001G035000--Sobic005G037000 Sobic001G035000--Sobic001G341600 Sobic001G035000--Sobic001G209800 Sobic007G122500 Sobic007G122500 Sobic001G035000--Sobic007G122500 Sobic007G126300 Sobic007G126300 Sobic001G035000--Sobic007G126300 Sobic001G035000--Sobic004G280900 Sobic009G200700 Sobic009G200700 Sobic006G148000--Sobic009G200700 Sobic006G148000--Sobic006G267000 Sobic006G148000--Sobic003G430400 Sobic006G148000--Sobic002G140300 Sobic006G179500 Sobic006G179500 Sobic006G148000--Sobic006G179500 Sobic006G148000--Sobic004G283500 Sobic001G040200 Sobic001G040200 Sobic006G148000--Sobic001G040200 Sobic002G359300 Sobic002G359300 Sobic006G148000--Sobic002G359300 Sobic001G320900 Sobic001G320900 Sobic006G148000--Sobic001G320900 Sobic002G140300--Sobic006G179500 Sobic002G140300--Sobic001G040200 Sobic006G165100 Sobic006G165100 Sobic002G140300--Sobic006G165100 Sobic002G140300--Sobic004G222500 Sobic002G140300--Sobic001G538866 Sobic002G140300--Sobic009G036100 Sobic006G183400 Sobic006G183400 Sobic002G140300--Sobic006G183400 Sobic003G324400 Sobic003G324400 Sobic002G140300--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G140300--Sobic009G247900 Sobic002G263400 Sobic002G263400 Sobic003G430400--Sobic002G263400 Sobic002G140400 Sobic002G140400 Sobic003G430400--Sobic002G140400 Sobic003G430400--Sobic001G040200 Sobic003G430400--Sobic006G066200 Sobic003G430400--Sobic002G140300 Sobic007G074000 Sobic007G074000 Sobic003G430400--Sobic007G074000 Sobic003G092900 Sobic003G092900 Sobic003G430400--Sobic003G092900 Sobic002G356101 Sobic002G356101 Sobic003G430400--Sobic002G356101 Sobic003G430400--Sobic004G222500 Sobic007G057700--Sobic001G341600 Sobic007G057700--Sobic001G441100 Sobic007G057700--Sobic002G278500 Sobic007G057700--Sobic009G217600 Sobic007G057700--Sobic006G267000 Sobic007G057700--Sobic002G140300 Sobic007G057700--Sobic006G179500 Sobic007G057700--Sobic006G066200 Sobic007G057700--Sobic004G222500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.