Gene annotation
Transcriptome id Sobic.003G323700.1
Synonym Sb03g037010
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
OsSub6 - Putative Subtilisin homologue, expressed
UniProt C5XME3
Pfam PF02225 PF05922 PF00082
Panther DB PTHR10795 PTHR10795:SF377
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004252serine-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT4G10540 : Subtilase family protein
RAP-DB (Rice) LOC_Os01g58240.1 : OsSub6 - Putative Subtilisin homologue, expressed
MaizeGDB (Corn) Zm00025a027219 , Zm00025a027222
Brachypodium -
Barley HORVU1Hr1G089380.8 , HORVU1Hr1G089380.7 , HORVU1Hr1G089380.6 , HORVU1Hr1G089380.5 , HORVU1Hr1G089380.4 , HORVU1Hr1G089380.3 , HORVU1Hr1G089380.2 , HORVU1Hr1G089380.1
Wheat TraesCS3B02G004200 , TraesCS1B02G434200 , TraesCSU02G208100 , TraesCS1D02G412400 , TraesCS3D02G008600 , TraesCS3A02G000100 , TraesCS6D02G033000 , TraesCS3A02G000200 , TraesCS3B02G004100 , TraesCS3B02G004600 , TraesCS1D02G412400 , TraesCS1D02G412400 , TraesCS6B02G041200 , TraesCSU02G001100 , TraesCSU02G001100 , TraesCS1B02G434200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.009G036100 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
3 Sobic.003G387200 - -
4 Sobic.004G222500 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
5 Sobic.001G329800 allene oxide cyclase 4, chloroplast precursor, putative, expressed K10525: allene oxide cyclase
6 Sobic.006G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@prephenate dehydratase domain containing protein, expressed K05359: ADT, arogenate/prephenate dehydratase
7 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
8 Sobic.003G430400 OsCML31 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
9 Sobic.002G220000 expressed protein -
10 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.001G330200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS3-12 - C2H2 zinc finger protein, expressed -
12 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
13 Sobic.001G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
14 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
15 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.010G259300 transferase family protein, putative, expressed -
17 Sobic.006G267000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.003G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
19 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
20 Sobic.010G066601 - -


Gene co-expression network
sample Sobic003G323700 Sobic003G323700 Sobic002G140300 Sobic002G140300 Sobic003G323700--Sobic002G140300 Sobic009G036100 Sobic009G036100 Sobic003G323700--Sobic009G036100 Sobic003G387200 Sobic003G387200 Sobic003G323700--Sobic003G387200 Sobic004G222500 Sobic004G222500 Sobic003G323700--Sobic004G222500 Sobic001G329800 Sobic001G329800 Sobic003G323700--Sobic001G329800 Sobic006G066200 Sobic006G066200 Sobic003G323700--Sobic006G066200 Sobic001G441100 Sobic001G441100 Sobic003G323700--Sobic001G441100 Sobic003G430400 Sobic003G430400 Sobic003G323700--Sobic003G430400 Sobic002G220000 Sobic002G220000 Sobic003G323700--Sobic002G220000 Sobic006G179500 Sobic006G179500 Sobic002G140300--Sobic006G179500 Sobic001G040200 Sobic001G040200 Sobic002G140300--Sobic001G040200 Sobic006G165100 Sobic006G165100 Sobic002G140300--Sobic006G165100 Sobic002G140300--Sobic004G222500 Sobic001G538866 Sobic001G538866 Sobic002G140300--Sobic001G538866 Sobic002G140300--Sobic009G036100 Sobic006G183400 Sobic006G183400 Sobic002G140300--Sobic006G183400 Sobic003G324400 Sobic003G324400 Sobic002G140300--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G140300--Sobic009G247900 Sobic009G036000 Sobic009G036000 Sobic009G036100--Sobic009G036000 Sobic007G074000 Sobic007G074000 Sobic009G036100--Sobic007G074000 Sobic001G320900 Sobic001G320900 Sobic009G036100--Sobic001G320900 Sobic001G407800 Sobic001G407800 Sobic009G036100--Sobic001G407800 Sobic009G036100--Sobic009G247900 Sobic009G036100--Sobic002G140300 Sobic003G369100 Sobic003G369100 Sobic009G036100--Sobic003G369100 Sobic009G036100--Sobic003G324400 Sobic001G258300 Sobic001G258300 Sobic009G036100--Sobic001G258300 Sobic006G267000 Sobic006G267000 Sobic003G387200--Sobic006G267000 Sobic003G387200--Sobic003G323700 Sobic003G387200--Sobic001G441100 Sobic001G341600 Sobic001G341600 Sobic003G387200--Sobic001G341600 Sobic001G035000 Sobic001G035000 Sobic003G387200--Sobic001G035000 Sobic006G148000 Sobic006G148000 Sobic003G387200--Sobic006G148000 Sobic003G387200--Sobic002G140300 Sobic003G387200--Sobic003G430400 Sobic007G057700 Sobic007G057700 Sobic003G387200--Sobic007G057700 Sobic004G222500--Sobic002G140300 Sobic003G093000 Sobic003G093000 Sobic004G222500--Sobic003G093000 Sobic003G092900 Sobic003G092900 Sobic004G222500--Sobic003G092900 Sobic003G428700 Sobic003G428700 Sobic004G222500--Sobic003G428700 Sobic004G222500--Sobic006G183400 Sobic004G222500--Sobic009G247900 Sobic001G035100 Sobic001G035100 Sobic004G222500--Sobic001G035100 Sobic004G222500--Sobic002G220000 Sobic004G222500--Sobic006G179500 Sobic007G155200 Sobic007G155200 Sobic001G329800--Sobic007G155200 Sobic004G228500 Sobic004G228500 Sobic001G329800--Sobic004G228500 Sobic001G329800--Sobic003G323700 Sobic001G329800--Sobic009G036000 Sobic001G329800--Sobic009G036100 Sobic001G329800--Sobic006G066200 Sobic001G015100 Sobic001G015100 Sobic001G329800--Sobic001G015100 Sobic001G330100 Sobic001G330100 Sobic001G329800--Sobic001G330100 Sobic010G223600 Sobic010G223600 Sobic001G329800--Sobic010G223600 Sobic006G066200--Sobic003G430400 Sobic006G066200--Sobic002G140300 Sobic006G066200--Sobic004G222500 Sobic006G066200--Sobic009G247900 Sobic004G341800 Sobic004G341800 Sobic006G066200--Sobic004G341800 Sobic006G066200--Sobic001G040200 Sobic006G066200--Sobic003G092900 Sobic002G131800 Sobic002G131800 Sobic006G066200--Sobic002G131800 Sobic006G066200--Sobic006G179500 Sobic001G441100--Sobic001G035000 Sobic009G217600 Sobic009G217600 Sobic001G441100--Sobic009G217600 Sobic001G077400 Sobic001G077400 Sobic001G441100--Sobic001G077400 Sobic001G441100--Sobic001G341600 Sobic005G037000 Sobic005G037000 Sobic001G441100--Sobic005G037000 Sobic004G280900 Sobic004G280900 Sobic001G441100--Sobic004G280900 Sobic002G278500 Sobic002G278500 Sobic001G441100--Sobic002G278500 Sobic001G209800 Sobic001G209800 Sobic001G441100--Sobic001G209800 Sobic001G441100--Sobic002G140300 Sobic002G263400 Sobic002G263400 Sobic003G430400--Sobic002G263400 Sobic002G140400 Sobic002G140400 Sobic003G430400--Sobic002G140400 Sobic003G430400--Sobic001G040200 Sobic003G430400--Sobic006G066200 Sobic003G430400--Sobic002G140300 Sobic003G430400--Sobic007G074000 Sobic003G430400--Sobic003G092900 Sobic002G356101 Sobic002G356101 Sobic003G430400--Sobic002G356101 Sobic003G430400--Sobic004G222500 Sobic002G220000--Sobic003G093000 Sobic002G220000--Sobic001G035100 Sobic001G330400 Sobic001G330400 Sobic002G220000--Sobic001G330400 Sobic002G220000--Sobic003G428700 Sobic002G220000--Sobic003G092900 Sobic009G122400 Sobic009G122400 Sobic002G220000--Sobic009G122400 Sobic004G169200 Sobic004G169200 Sobic002G220000--Sobic004G169200 Sobic002G189100 Sobic002G189100 Sobic002G220000--Sobic002G189100 Sobic004G219800 Sobic004G219800 Sobic002G220000--Sobic004G219800
Octagon: transcription factors


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