Gene annotation
Transcriptome id Sobic.003G349600.1
Synonym Sb03g039250
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
ZOS1-14 - C2H2 zinc finger protein, expressed
UniProt C5XP39
Pfam PF13912
Panther DB PTHR26374 PTHR26374:SF196
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G53600 : C2H2-type zinc finger family protein
RAP-DB (Rice) LOC_Os01g62130.1 : ZOS1-14 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a039697 , Zm00025a026940 , Zm00025a008795
Brachypodium KQK10494 , KQK10499 , PNT60482 , KQJ81406
Barley HORVU5Hr1G045760.1 , HORVU5Hr1G045760.2 , HORVU3Hr1G086840.3 , HORVU3Hr1G086840.2 , HORVU3Hr1G086840.1 , HORVU1Hr1G006920.1 , HORVU4Hr1G058690.1 , HORVU4Hr1G058720.1 , HORVU5Hr1G112930.4 , HORVU5Hr1G112930.2 , HORVU5Hr1G112930.1 , HORVU5Hr1G113080.1 , HORVU5Hr1G112970.2 , HORVU5Hr1G112970.1 , HORVU5Hr1G113090.1 , HORVU5Hr1G113120.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
3 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
4 Sobic.007G155200 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
5 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.008G187001 - K09422: transcription factor MYB, plant
7 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
8 Sobic.002G139400 AP2 domain containing protein, expressed -
9 Sobic.002G263400 expressed protein -
10 Sobic.009G241801 - -
11 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
12 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
13 Sobic.001G192200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
16 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
17 Sobic.001G466000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
18 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
19 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
20 Sobic.003G282901 - -


Gene co-expression network
sample Sobic003G349600 Sobic003G349600 Sobic004G243100 Sobic004G243100 Sobic003G349600--Sobic004G243100 Sobic009G224100 Sobic009G224100 Sobic003G349600--Sobic009G224100 Sobic001G330100 Sobic001G330100 Sobic003G349600--Sobic001G330100 Sobic007G155200 Sobic007G155200 Sobic003G349600--Sobic007G155200 Sobic002G140400 Sobic002G140400 Sobic003G349600--Sobic002G140400 Sobic008G187001 Sobic008G187001 Sobic003G349600--Sobic008G187001 Sobic007G036900 Sobic007G036900 Sobic003G349600--Sobic007G036900 Sobic002G139400 Sobic002G139400 Sobic003G349600--Sobic002G139400 Sobic002G263400 Sobic002G263400 Sobic003G349600--Sobic002G263400 Sobic001G018300 Sobic001G018300 Sobic004G243100--Sobic001G018300 Sobic001G231400 Sobic001G231400 Sobic004G243100--Sobic001G231400 Sobic004G243100--Sobic009G224100 Sobic001G423800 Sobic001G423800 Sobic004G243100--Sobic001G423800 Sobic004G243100--Sobic002G139400 Sobic002G192000 Sobic002G192000 Sobic004G243100--Sobic002G192000 Sobic002G251000 Sobic002G251000 Sobic004G243100--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic004G243100--Sobic003G282901 Sobic004G243100--Sobic002G263400 Sobic009G224100--Sobic004G243100 Sobic009G224100--Sobic002G139400 Sobic002G184200 Sobic002G184200 Sobic009G224100--Sobic002G184200 Sobic009G224100--Sobic008G187001 Sobic009G224100--Sobic007G155200 Sobic009G224100--Sobic001G423800 Sobic002G388900 Sobic002G388900 Sobic009G224100--Sobic002G388900 Sobic001G192200 Sobic001G192200 Sobic009G224100--Sobic001G192200 Sobic009G224100--Sobic001G330100 Sobic001G330200 Sobic001G330200 Sobic001G330100--Sobic001G330200 Sobic009G144700 Sobic009G144700 Sobic001G330100--Sobic009G144700 Sobic001G330100--Sobic002G388900 Sobic001G256700 Sobic001G256700 Sobic001G330100--Sobic001G256700 Sobic004G219800 Sobic004G219800 Sobic001G330100--Sobic004G219800 Sobic002G395300 Sobic002G395300 Sobic001G330100--Sobic002G395300 Sobic004G108200 Sobic004G108200 Sobic001G330100--Sobic004G108200 Sobic004G352000 Sobic004G352000 Sobic001G330100--Sobic004G352000 Sobic004G294400 Sobic004G294400 Sobic001G330100--Sobic004G294400 Sobic007G155200--Sobic009G224100 Sobic007G155200--Sobic002G184200 Sobic005G045900 Sobic005G045900 Sobic007G155200--Sobic005G045900 Sobic007G155200--Sobic002G140400 Sobic004G037000 Sobic004G037000 Sobic007G155200--Sobic004G037000 Sobic010G196600 Sobic010G196600 Sobic007G155200--Sobic010G196600 Sobic004G228500 Sobic004G228500 Sobic007G155200--Sobic004G228500 Sobic007G155200--Sobic003G349600 Sobic007G155200--Sobic002G139400 Sobic001G038900 Sobic001G038900 Sobic002G140400--Sobic001G038900 Sobic002G140400--Sobic002G263400 Sobic004G189400 Sobic004G189400 Sobic002G140400--Sobic004G189400 Sobic002G140400--Sobic001G423800 Sobic008G136400 Sobic008G136400 Sobic002G140400--Sobic008G136400 Sobic007G074000 Sobic007G074000 Sobic002G140400--Sobic007G074000 Sobic004G237800 Sobic004G237800 Sobic002G140400--Sobic004G237800 Sobic008G050600 Sobic008G050600 Sobic002G140400--Sobic008G050600 Sobic003G286600 Sobic003G286600 Sobic002G140400--Sobic003G286600 Sobic008G187001--Sobic002G388900 Sobic008G187001--Sobic001G256700 Sobic008G187001--Sobic007G036900 Sobic008G187001--Sobic009G224100 Sobic008G187001--Sobic004G219800 Sobic009G032000 Sobic009G032000 Sobic008G187001--Sobic009G032000 Sobic008G187001--Sobic001G330100 Sobic009G122400 Sobic009G122400 Sobic008G187001--Sobic009G122400 Sobic008G187001--Sobic004G352000 Sobic004G004500 Sobic004G004500 Sobic007G036900--Sobic004G004500 Sobic007G036900--Sobic008G187001 Sobic004G229800 Sobic004G229800 Sobic007G036900--Sobic004G229800 Sobic007G036900--Sobic001G256700 Sobic004G141200 Sobic004G141200 Sobic007G036900--Sobic004G141200 Sobic002G339000 Sobic002G339000 Sobic007G036900--Sobic002G339000 Sobic003G364600 Sobic003G364600 Sobic007G036900--Sobic003G364600 Sobic001G108200 Sobic001G108200 Sobic007G036900--Sobic001G108200 Sobic001G079300 Sobic001G079300 Sobic007G036900--Sobic001G079300 Sobic002G139400--Sobic004G243100 Sobic002G139400--Sobic009G224100 Sobic002G139400--Sobic002G184200 Sobic002G139400--Sobic001G192200 Sobic002G139400--Sobic001G231400 Sobic002G139400--Sobic002G251000 Sobic002G139400--Sobic003G282901 Sobic002G139400--Sobic001G018300 Sobic002G139400--Sobic001G423800 Sobic002G263400--Sobic002G140400 Sobic002G263400--Sobic004G189400 Sobic002G263400--Sobic003G282901 Sobic002G263400--Sobic004G243100 Sobic002G263400--Sobic001G018300 Sobic002G263400--Sobic001G423800 Sobic002G263400--Sobic002G192000 Sobic002G263400--Sobic001G231400 Sobic003G322900 Sobic003G322900 Sobic002G263400--Sobic003G322900
Octagon: transcription factors


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