Gene annotation
Transcriptome id Sobic.001G466000.1
Synonym Sb01g043720
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
glycosyl hydrolase family 10 protein, putative, expressed
UniProt C5WTT4
Pfam PF02018 PF00331
Panther DB PTHR31490 PTHR31490:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016798; hydrolase activity, acting on glycosyl bonds GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G33840 : Glycosyl hydrolase family 10 protein
RAP-DB (Rice) LOC_Os03g10478.1 : glycosyl hydrolase family 10 protein, putative, expressed
MaizeGDB (Corn) Zm00025a001161 , Zm00025a003966 , Zm00025a053144 , Zm00025a053145
Brachypodium KQK23061 , KQK23063 , PNT67306
Barley HORVU4Hr1G070310.20 , HORVU4Hr1G070310.21 , HORVU4Hr1G070310.22 , HORVU1Hr1G023120.3 , HORVU1Hr1G023120.2 , HORVU1Hr1G023120.1 , HORVU4Hr1G070310.19 , HORVU4Hr1G070310.18 , HORVU4Hr1G070310.11 , HORVU4Hr1G070310.12 , HORVU4Hr1G070310.13 , HORVU4Hr1G070310.15 , HORVU4Hr1G070310.14 , HORVU2Hr1G113150.1 , HORVU4Hr1G070260.11 , HORVU4Hr1G070260.10 , HORVU4Hr1G070260.13 , HORVU4Hr1G070260.12 , HORVU4Hr1G070260.15 , HORVU4Hr1G070260.14 , HORVU4Hr1G070260.16 , HORVU2Hr1G122890.1 , HORVU2Hr1G122890.2 , HORVU2Hr1G122890.3 , HORVU2Hr1G122890.4 , HORVU2Hr1G122890.5 , HORVU2Hr1G122890.6
Wheat TraesCS4B02G259100 , TraesCS4D02G259100 , TraesCS5D02G194800 , TraesCS4D02G259500 , TraesCSU02G021800 , TraesCS1D02G107700 , TraesCS1A02G107100 , TraesCS5A02G196500 , TraesCS2B02G537100 , TraesCS2A02G584800 , TraesCS4A02G045800 , TraesCS2D02G510500 , TraesCS4B02G259400 , TraesCS5A02G196600 , TraesCS1B02G124500 , TraesCS4A02G045500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G367400 esterase, putative, expressed -
2 Sobic.003G349600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-14 - C2H2 zinc finger protein, expressed -
3 Sobic.009G254900 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
4 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
5 Sobic.005G063100 expressed protein -
6 Sobic.009G234100 WRKY49, expressed -
7 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
8 Sobic.008G136400 expressed protein -
9 Sobic.003G116800 cinnamoyl CoA reductase, putative, expressed K09753: cinnamoyl-CoA reductase
10 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
12 Sobic.001G108200 expressed protein -
13 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
14 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
15 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
16 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
17 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
18 Sobic.004G086400 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
19 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
20 Sobic.006G075400 U-box domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G466000 Sobic001G466000 Sobic002G367400 Sobic002G367400 Sobic001G466000--Sobic002G367400 Sobic003G349600 Sobic003G349600 Sobic001G466000--Sobic003G349600 Sobic009G254900 Sobic009G254900 Sobic001G466000--Sobic009G254900 Sobic009G143400 Sobic009G143400 Sobic001G466000--Sobic009G143400 Sobic005G063100 Sobic005G063100 Sobic001G466000--Sobic005G063100 Sobic009G234100 Sobic009G234100 Sobic001G466000--Sobic009G234100 Sobic002G336600 Sobic002G336600 Sobic001G466000--Sobic002G336600 Sobic008G136400 Sobic008G136400 Sobic001G466000--Sobic008G136400 Sobic003G116800 Sobic003G116800 Sobic001G466000--Sobic003G116800 Sobic004G237800 Sobic004G237800 Sobic002G367400--Sobic004G237800 Sobic002G055700 Sobic002G055700 Sobic002G367400--Sobic002G055700 Sobic002G017800 Sobic002G017800 Sobic002G367400--Sobic002G017800 Sobic002G367400--Sobic001G466000 Sobic001G367600 Sobic001G367600 Sobic002G367400--Sobic001G367600 Sobic003G043500 Sobic003G043500 Sobic002G367400--Sobic003G043500 Sobic009G111000 Sobic009G111000 Sobic002G367400--Sobic009G111000 Sobic001G046100 Sobic001G046100 Sobic002G367400--Sobic001G046100 Sobic004G321300 Sobic004G321300 Sobic002G367400--Sobic004G321300 Sobic004G243100 Sobic004G243100 Sobic003G349600--Sobic004G243100 Sobic009G224100 Sobic009G224100 Sobic003G349600--Sobic009G224100 Sobic001G330100 Sobic001G330100 Sobic003G349600--Sobic001G330100 Sobic007G155200 Sobic007G155200 Sobic003G349600--Sobic007G155200 Sobic002G140400 Sobic002G140400 Sobic003G349600--Sobic002G140400 Sobic008G187001 Sobic008G187001 Sobic003G349600--Sobic008G187001 Sobic007G036900 Sobic007G036900 Sobic003G349600--Sobic007G036900 Sobic002G139400 Sobic002G139400 Sobic003G349600--Sobic002G139400 Sobic002G263400 Sobic002G263400 Sobic003G349600--Sobic002G263400 Sobic009G254900--Sobic002G367400 Sobic009G254900--Sobic001G466000 Sobic002G004900 Sobic002G004900 Sobic009G254900--Sobic002G004900 Sobic002G353900 Sobic002G353900 Sobic009G254900--Sobic002G353900 Sobic006G113200 Sobic006G113200 Sobic009G254900--Sobic006G113200 Sobic009G254900--Sobic002G017800 Sobic010G259600 Sobic010G259600 Sobic009G254900--Sobic010G259600 Sobic002G302500 Sobic002G302500 Sobic009G254900--Sobic002G302500 Sobic009G254900--Sobic009G143400 Sobic010G086200 Sobic010G086200 Sobic009G143400--Sobic010G086200 Sobic003G393700 Sobic003G393700 Sobic009G143400--Sobic003G393700 Sobic004G061200 Sobic004G061200 Sobic009G143400--Sobic004G061200 Sobic003G379800 Sobic003G379800 Sobic009G143400--Sobic003G379800 Sobic001G281400 Sobic001G281400 Sobic009G143400--Sobic001G281400 Sobic002G046100 Sobic002G046100 Sobic009G143400--Sobic002G046100 Sobic010G149300 Sobic010G149300 Sobic009G143400--Sobic010G149300 Sobic002G190900 Sobic002G190900 Sobic009G143400--Sobic002G190900 Sobic009G033700 Sobic009G033700 Sobic009G143400--Sobic009G033700 Sobic008G050600 Sobic008G050600 Sobic005G063100--Sobic008G050600 Sobic003G345100 Sobic003G345100 Sobic005G063100--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic005G063100--Sobic003G286600 Sobic001G140900 Sobic001G140900 Sobic005G063100--Sobic001G140900 Sobic005G099000 Sobic005G099000 Sobic005G063100--Sobic005G099000 Sobic005G063100--Sobic009G234100 Sobic005G091500 Sobic005G091500 Sobic005G063100--Sobic005G091500 Sobic004G208700 Sobic004G208700 Sobic005G063100--Sobic004G208700 Sobic001G435000 Sobic001G435000 Sobic005G063100--Sobic001G435000 Sobic009G234100--Sobic004G208700 Sobic009G234100--Sobic005G063100 Sobic009G234100--Sobic003G345100 Sobic009G234100--Sobic003G286600 Sobic009G234100--Sobic001G435000 Sobic009G234100--Sobic008G050600 Sobic009G234100--Sobic005G099000 Sobic007G155000 Sobic007G155000 Sobic009G234100--Sobic007G155000 Sobic009G234100--Sobic010G259600 Sobic002G336600--Sobic004G237800 Sobic007G074000 Sobic007G074000 Sobic002G336600--Sobic007G074000 Sobic002G336600--Sobic004G208700 Sobic004G229800 Sobic004G229800 Sobic002G336600--Sobic004G229800 Sobic003G369100 Sobic003G369100 Sobic002G336600--Sobic003G369100 Sobic002G336600--Sobic001G435000 Sobic002G336600--Sobic002G140400 Sobic004G141200 Sobic004G141200 Sobic002G336600--Sobic004G141200 Sobic002G336600--Sobic003G345100 Sobic001G038900 Sobic001G038900 Sobic008G136400--Sobic001G038900 Sobic008G136400--Sobic008G050600 Sobic008G136400--Sobic002G140400 Sobic006G275200 Sobic006G275200 Sobic008G136400--Sobic006G275200 Sobic008G136400--Sobic001G140900 Sobic006G158600 Sobic006G158600 Sobic008G136400--Sobic006G158600 Sobic004G189400 Sobic004G189400 Sobic008G136400--Sobic004G189400 Sobic001G423800 Sobic001G423800 Sobic008G136400--Sobic001G423800 Sobic009G008900 Sobic009G008900 Sobic008G136400--Sobic009G008900 Sobic003G116800--Sobic005G099000 Sobic003G116800--Sobic005G063100 Sobic003G116800--Sobic003G286600 Sobic001G108200 Sobic001G108200 Sobic003G116800--Sobic001G108200 Sobic003G116800--Sobic001G435000 Sobic010G176600 Sobic010G176600 Sobic003G116800--Sobic010G176600 Sobic004G301000 Sobic004G301000 Sobic003G116800--Sobic004G301000 Sobic003G116800--Sobic004G229800 Sobic003G116800--Sobic003G345100
Octagon: transcription factors


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