Gene annotation
Transcriptome id Sobic.004G249900.1
Synonym
Functional annotation -
UniProt C5XZC3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G122500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@IQ calmodulin-binding and BAG domain containing protein, putative, expressed -
2 Sobic.004G228900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
3 Sobic.001G093200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
4 Sobic.002G278500 nodulin, putative, expressed -
5 Sobic.001G426000 Up-reguralion under heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
6 Sobic.001G424200 protein kinase, putative, expressed -
7 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
8 Sobic.003G310700 mal d 1-associated protein, putative, expressed -
9 Sobic.003G094200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alanyl-tRNA synthetase, putative, expressed -
10 Sobic.007G057700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
11 Sobic.009G231400 Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
12 Sobic.001G064500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
13 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
14 Sobic.003G300800 GA inactivating enzyme(PubMedID : 24151305)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-regulation in phyB-1 mutant(PubMedID : 26893475)@Expressed in older stem(PubMedID : 28649278)@gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
15 Sobic.010G223600 ubiquitin family protein, putative, expressed K08770: ubiquitin C
16 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G338600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
18 Sobic.003G350700 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
19 Sobic.003G136000 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
20 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase


Gene co-expression network
sample Sobic004G249900 Sobic004G249900 Sobic005G122500 Sobic005G122500 Sobic004G249900--Sobic005G122500 Sobic004G228900 Sobic004G228900 Sobic004G249900--Sobic004G228900 Sobic001G093200 Sobic001G093200 Sobic004G249900--Sobic001G093200 Sobic002G278500 Sobic002G278500 Sobic004G249900--Sobic002G278500 Sobic001G426000 Sobic001G426000 Sobic004G249900--Sobic001G426000 Sobic001G424200 Sobic001G424200 Sobic004G249900--Sobic001G424200 Sobic004G036600 Sobic004G036600 Sobic004G249900--Sobic004G036600 Sobic003G310700 Sobic003G310700 Sobic004G249900--Sobic003G310700 Sobic003G094200 Sobic003G094200 Sobic004G249900--Sobic003G094200 Sobic005G122500--Sobic004G228900 Sobic005G122500--Sobic004G249900 Sobic005G122500--Sobic002G278500 Sobic001G338600 Sobic001G338600 Sobic005G122500--Sobic001G338600 Sobic005G122500--Sobic001G426000 Sobic003G350700 Sobic003G350700 Sobic005G122500--Sobic003G350700 Sobic010G234700 Sobic010G234700 Sobic005G122500--Sobic010G234700 Sobic009G231400 Sobic009G231400 Sobic005G122500--Sobic009G231400 Sobic005G122500--Sobic001G424200 Sobic004G228900--Sobic005G122500 Sobic004G228900--Sobic001G426000 Sobic004G228900--Sobic002G278500 Sobic004G228900--Sobic001G338600 Sobic004G228900--Sobic003G350700 Sobic004G228900--Sobic004G249900 Sobic004G228900--Sobic003G310700 Sobic004G228900--Sobic010G234700 Sobic010G104300 Sobic010G104300 Sobic004G228900--Sobic010G104300 Sobic001G093200--Sobic009G231400 Sobic001G093200--Sobic004G249900 Sobic001G420100 Sobic001G420100 Sobic001G093200--Sobic001G420100 Sobic001G093200--Sobic005G122500 Sobic009G163900 Sobic009G163900 Sobic001G093200--Sobic009G163900 Sobic001G093200--Sobic004G228900 Sobic004G245850 Sobic004G245850 Sobic001G093200--Sobic004G245850 Sobic001G092600 Sobic001G092600 Sobic001G093200--Sobic001G092600 Sobic006G184800 Sobic006G184800 Sobic001G093200--Sobic006G184800 Sobic002G278500--Sobic004G228900 Sobic001G441100 Sobic001G441100 Sobic002G278500--Sobic001G441100 Sobic002G278500--Sobic001G338600 Sobic002G278500--Sobic005G122500 Sobic009G217600 Sobic009G217600 Sobic002G278500--Sobic009G217600 Sobic002G294700 Sobic002G294700 Sobic002G278500--Sobic002G294700 Sobic002G282300 Sobic002G282300 Sobic002G278500--Sobic002G282300 Sobic001G341600 Sobic001G341600 Sobic002G278500--Sobic001G341600 Sobic008G177800 Sobic008G177800 Sobic002G278500--Sobic008G177800 Sobic001G426000--Sobic004G228900 Sobic009G169000 Sobic009G169000 Sobic001G426000--Sobic009G169000 Sobic001G426000--Sobic001G338600 Sobic010G196600 Sobic010G196600 Sobic001G426000--Sobic010G196600 Sobic001G426000--Sobic003G310700 Sobic001G320900 Sobic001G320900 Sobic001G426000--Sobic001G320900 Sobic003G144700 Sobic003G144700 Sobic001G426000--Sobic003G144700 Sobic001G426000--Sobic002G282300 Sobic001G426000--Sobic002G278500 Sobic001G424200--Sobic003G094200 Sobic006G231332 Sobic006G231332 Sobic001G424200--Sobic006G231332 Sobic003G300800 Sobic003G300800 Sobic001G424200--Sobic003G300800 Sobic010G178500 Sobic010G178500 Sobic001G424200--Sobic010G178500 Sobic001G424200--Sobic002G294700 Sobic001G424200--Sobic004G249900 Sobic004G048100 Sobic004G048100 Sobic001G424200--Sobic004G048100 Sobic001G424200--Sobic008G177800 Sobic001G424200--Sobic004G036600 Sobic004G036600--Sobic002G294700 Sobic004G036600--Sobic008G177800 Sobic006G231100 Sobic006G231100 Sobic004G036600--Sobic006G231100 Sobic001G173300 Sobic001G173300 Sobic004G036600--Sobic001G173300 Sobic010G234600 Sobic010G234600 Sobic004G036600--Sobic010G234600 Sobic001G516600 Sobic001G516600 Sobic004G036600--Sobic001G516600 Sobic002G374100 Sobic002G374100 Sobic004G036600--Sobic002G374100 Sobic009G141800 Sobic009G141800 Sobic004G036600--Sobic009G141800 Sobic009G217000 Sobic009G217000 Sobic004G036600--Sobic009G217000 Sobic003G310700--Sobic001G426000 Sobic001G032800 Sobic001G032800 Sobic003G310700--Sobic001G032800 Sobic003G310700--Sobic004G228900 Sobic003G310700--Sobic004G036600 Sobic003G310700--Sobic009G217000 Sobic006G267200 Sobic006G267200 Sobic003G310700--Sobic006G267200 Sobic003G310700--Sobic009G169000 Sobic010G223600 Sobic010G223600 Sobic003G310700--Sobic010G223600 Sobic006G194000 Sobic006G194000 Sobic003G310700--Sobic006G194000 Sobic003G094200--Sobic001G424200 Sobic003G094200--Sobic010G178500 Sobic002G104900 Sobic002G104900 Sobic003G094200--Sobic002G104900 Sobic003G094200--Sobic009G141800 Sobic001G124600 Sobic001G124600 Sobic003G094200--Sobic001G124600 Sobic001G015100 Sobic001G015100 Sobic003G094200--Sobic001G015100 Sobic006G131400 Sobic006G131400 Sobic003G094200--Sobic006G131400 Sobic003G094200--Sobic009G217000 Sobic003G094200--Sobic004G036600
Octagon: transcription factors


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