Gene annotation
Transcriptome id Sobic.001G093200.2,Sobic.001G093200.1
Synonym AT-HSFA6B, Sb01g008380, HSFA6B
Functional annotation HSF-type DNA-binding domain containing protein, expressed
UniProt C5X177
Pfam PF00447
Panther DB PTHR10015 PTHR10015:SF190
NCBI CDD KOG0627; Heat shock transcription factor
KEGG Orthology K09419; heat shock transcription factor, other eukaryote
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G22830 : heat shock transcription factor A6B
RAP-DB (Rice) LOC_Os03g53340.6,LOC_Os03g53340.3 : HSF-type DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008110 , Zm00025a005373 , Zm00025a051078 , Zm00025a000764 , Zm00025a027698 , Zm00025a033648
Brachypodium KQK13249 , KQK14978 , KQK14979 , KQK08811 , KQK18031 , KQK18032 , KQJ99265 , KQK23525 , KQK13250 , KQK23526 , PNT74158 , PNT74157 , PNT74156 , PNT74155 , PNT72425 , KQJ94147
Barley HORVU5Hr1G068100.1 , HORVU5Hr1G068100.2 , HORVU5Hr1G068100.3 , HORVU7Hr1G088920.2 , HORVU7Hr1G088920.3 , HORVU7Hr1G088920.1 , HORVU3Hr1G088890.2 , HORVU3Hr1G088890.1 , HORVU5Hr1G094380.14 , HORVU4Hr1G073650.5 , HORVU4Hr1G073650.4 , HORVU4Hr1G073650.7 , HORVU4Hr1G073650.6 , HORVU4Hr1G073650.1 , HORVU4Hr1G073650.3 , HORVU4Hr1G073650.2 , HORVU3Hr1G055960.4 , HORVU3Hr1G055960.5 , HORVU3Hr1G055960.1 , HORVU3Hr1G055960.2 , HORVU3Hr1G055960.3 , HORVU5Hr1G094380.8 , HORVU5Hr1G094380.5 , HORVU5Hr1G094380.4 , HORVU5Hr1G094380.7 , HORVU5Hr1G094380.6 , HORVU5Hr1G094380.1 , HORVU5Hr1G094380.3 , HORVU5Hr1G094380.2 , HORVU3Hr1G069590.2 , HORVU3Hr1G069590.3 , HORVU3Hr1G069590.1 , HORVU3Hr1G069590.4
Wheat TraesCS3A02G393200 , TraesCS3A02G280800 , TraesCS1A02G375600 , TraesCS5B02G236100 , TraesCS3D02G386000 , TraesCS1A02G375600 , TraesCS5A02G383800 , TraesCS7A02G355300 , TraesCS7D02G367700 , TraesCS5A02G237600 , TraesCS4A02G027700 , TraesCS3A02G229000 , TraesCS5D02G393200 , TraesCS3B02G255600 , TraesCS3D02G227200 , TraesCS3D02G280600 , TraesCS7B02G272500 , TraesCS5D02G243900 , TraesCS3D02G385900 , TraesCS1D02G382900 , TraesCS1B02G396000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G231400 Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
2 Sobic.004G249900 - -
3 Sobic.001G420100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
4 Sobic.005G122500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@IQ calmodulin-binding and BAG domain containing protein, putative, expressed -
5 Sobic.009G163900 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
6 Sobic.004G228900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
7 Sobic.004G245850 - -
8 Sobic.001G092600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
9 Sobic.006G184800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
10 Sobic.003G350700 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
11 Sobic.010G076700 expressed protein -
12 Sobic.006G055600 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
13 Sobic.002G278500 nodulin, putative, expressed -
14 Sobic.001G398500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@long cell-linked locus protein, putative, expressed -
15 Sobic.001G064500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
16 Sobic.007G057800 - -
17 Sobic.007G057700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
18 Sobic.006G005600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock protein, putative, expressed K04079: HSP90A, molecular chaperone HtpG
19 Sobic.004G321000 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
20 Sobic.004G319700 ethylene-responsive transcription factor, putative, expressed -


Gene co-expression network
sample Sobic001G093200 Sobic001G093200 Sobic009G231400 Sobic009G231400 Sobic001G093200--Sobic009G231400 Sobic004G249900 Sobic004G249900 Sobic001G093200--Sobic004G249900 Sobic001G420100 Sobic001G420100 Sobic001G093200--Sobic001G420100 Sobic005G122500 Sobic005G122500 Sobic001G093200--Sobic005G122500 Sobic009G163900 Sobic009G163900 Sobic001G093200--Sobic009G163900 Sobic004G228900 Sobic004G228900 Sobic001G093200--Sobic004G228900 Sobic004G245850 Sobic004G245850 Sobic001G093200--Sobic004G245850 Sobic001G092600 Sobic001G092600 Sobic001G093200--Sobic001G092600 Sobic006G184800 Sobic006G184800 Sobic001G093200--Sobic006G184800 Sobic009G231400--Sobic009G163900 Sobic009G231400--Sobic001G093200 Sobic009G231400--Sobic001G420100 Sobic010G076700 Sobic010G076700 Sobic009G231400--Sobic010G076700 Sobic009G231400--Sobic001G092600 Sobic003G350700 Sobic003G350700 Sobic009G231400--Sobic003G350700 Sobic009G231400--Sobic006G184800 Sobic009G231400--Sobic005G122500 Sobic002G203000 Sobic002G203000 Sobic009G231400--Sobic002G203000 Sobic004G249900--Sobic005G122500 Sobic004G249900--Sobic004G228900 Sobic004G249900--Sobic001G093200 Sobic002G278500 Sobic002G278500 Sobic004G249900--Sobic002G278500 Sobic001G426000 Sobic001G426000 Sobic004G249900--Sobic001G426000 Sobic001G424200 Sobic001G424200 Sobic004G249900--Sobic001G424200 Sobic004G036600 Sobic004G036600 Sobic004G249900--Sobic004G036600 Sobic003G310700 Sobic003G310700 Sobic004G249900--Sobic003G310700 Sobic003G094200 Sobic003G094200 Sobic004G249900--Sobic003G094200 Sobic001G420100--Sobic009G231400 Sobic001G420100--Sobic001G093200 Sobic001G420100--Sobic006G184800 Sobic001G420100--Sobic009G163900 Sobic001G064500 Sobic001G064500 Sobic001G420100--Sobic001G064500 Sobic001G420100--Sobic010G076700 Sobic001G420100--Sobic002G203000 Sobic001G420100--Sobic001G092600 Sobic001G420100--Sobic004G249900 Sobic005G122500--Sobic004G228900 Sobic005G122500--Sobic004G249900 Sobic005G122500--Sobic002G278500 Sobic001G338600 Sobic001G338600 Sobic005G122500--Sobic001G338600 Sobic005G122500--Sobic001G426000 Sobic005G122500--Sobic003G350700 Sobic010G234700 Sobic010G234700 Sobic005G122500--Sobic010G234700 Sobic005G122500--Sobic009G231400 Sobic005G122500--Sobic001G424200 Sobic009G163900--Sobic009G231400 Sobic009G163900--Sobic001G092600 Sobic009G163900--Sobic006G184800 Sobic006G005600 Sobic006G005600 Sobic009G163900--Sobic006G005600 Sobic006G055600 Sobic006G055600 Sobic009G163900--Sobic006G055600 Sobic004G321000 Sobic004G321000 Sobic009G163900--Sobic004G321000 Sobic009G163900--Sobic010G076700 Sobic009G163900--Sobic004G245850 Sobic004G278200 Sobic004G278200 Sobic009G163900--Sobic004G278200 Sobic004G228900--Sobic005G122500 Sobic004G228900--Sobic001G426000 Sobic004G228900--Sobic002G278500 Sobic004G228900--Sobic001G338600 Sobic004G228900--Sobic003G350700 Sobic004G228900--Sobic004G249900 Sobic004G228900--Sobic003G310700 Sobic004G228900--Sobic010G234700 Sobic010G104300 Sobic010G104300 Sobic004G228900--Sobic010G104300 Sobic004G245850--Sobic006G184800 Sobic004G245850--Sobic009G163900 Sobic004G245850--Sobic006G055600 Sobic008G159100 Sobic008G159100 Sobic004G245850--Sobic008G159100 Sobic004G245850--Sobic001G093200 Sobic004G283201 Sobic004G283201 Sobic004G245850--Sobic004G283201 Sobic002G427400 Sobic002G427400 Sobic004G245850--Sobic002G427400 Sobic004G245850--Sobic001G092600 Sobic004G245850--Sobic004G278200 Sobic001G092600--Sobic006G005600 Sobic001G092600--Sobic006G055600 Sobic001G092600--Sobic009G163900 Sobic001G092600--Sobic004G283201 Sobic001G092600--Sobic006G184800 Sobic001G092600--Sobic009G231400 Sobic009G201500 Sobic009G201500 Sobic001G092600--Sobic009G201500 Sobic003G373150 Sobic003G373150 Sobic001G092600--Sobic003G373150 Sobic001G092600--Sobic004G321000 Sobic006G184800--Sobic004G283201 Sobic006G184800--Sobic006G055600 Sobic006G184800--Sobic009G163900 Sobic006G184800--Sobic001G092600 Sobic006G184800--Sobic006G005600 Sobic006G184800--Sobic004G245850 Sobic001G476400 Sobic001G476400 Sobic006G184800--Sobic001G476400 Sobic006G184800--Sobic009G231400 Sobic004G283300 Sobic004G283300 Sobic006G184800--Sobic004G283300
Octagon: transcription factors


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