Gene annotation
Transcriptome id Sobic.007G057800.1
Synonym
Functional annotation -
UniProt A0A1B6PFU3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a055027 , Zm00025a055026
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G249900 - -
2 Sobic.005G122500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@IQ calmodulin-binding and BAG domain containing protein, putative, expressed -
3 Sobic.001G276900 ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
4 Sobic.002G278500 nodulin, putative, expressed -
5 Sobic.004G245850 - -
6 Sobic.001G093200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
7 Sobic.007G057700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
8 Sobic.004G228900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
9 Sobic.008G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.001G440200 senescence-associated protein, putative, expressed -
11 Sobic.002G335200 expressed protein -
12 Sobic.010G104300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
13 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
14 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -
15 Sobic.004G319700 ethylene-responsive transcription factor, putative, expressed -
16 Sobic.001G495132 - -
17 Sobic.009G163900 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
18 Sobic.009G231400 Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
19 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
20 Sobic.006G184800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -


Gene co-expression network
sample Sobic007G057800 Sobic007G057800 Sobic004G249900 Sobic004G249900 Sobic007G057800--Sobic004G249900 Sobic005G122500 Sobic005G122500 Sobic007G057800--Sobic005G122500 Sobic001G276900 Sobic001G276900 Sobic007G057800--Sobic001G276900 Sobic002G278500 Sobic002G278500 Sobic007G057800--Sobic002G278500 Sobic004G245850 Sobic004G245850 Sobic007G057800--Sobic004G245850 Sobic001G093200 Sobic001G093200 Sobic007G057800--Sobic001G093200 Sobic007G057700 Sobic007G057700 Sobic007G057800--Sobic007G057700 Sobic004G228900 Sobic004G228900 Sobic007G057800--Sobic004G228900 Sobic008G042900 Sobic008G042900 Sobic007G057800--Sobic008G042900 Sobic004G249900--Sobic005G122500 Sobic004G249900--Sobic004G228900 Sobic004G249900--Sobic001G093200 Sobic004G249900--Sobic002G278500 Sobic001G426000 Sobic001G426000 Sobic004G249900--Sobic001G426000 Sobic001G424200 Sobic001G424200 Sobic004G249900--Sobic001G424200 Sobic004G036600 Sobic004G036600 Sobic004G249900--Sobic004G036600 Sobic003G310700 Sobic003G310700 Sobic004G249900--Sobic003G310700 Sobic003G094200 Sobic003G094200 Sobic004G249900--Sobic003G094200 Sobic005G122500--Sobic004G228900 Sobic005G122500--Sobic004G249900 Sobic005G122500--Sobic002G278500 Sobic001G338600 Sobic001G338600 Sobic005G122500--Sobic001G338600 Sobic005G122500--Sobic001G426000 Sobic003G350700 Sobic003G350700 Sobic005G122500--Sobic003G350700 Sobic010G234700 Sobic010G234700 Sobic005G122500--Sobic010G234700 Sobic009G231400 Sobic009G231400 Sobic005G122500--Sobic009G231400 Sobic005G122500--Sobic001G424200 Sobic001G440200 Sobic001G440200 Sobic001G276900--Sobic001G440200 Sobic006G267000 Sobic006G267000 Sobic001G276900--Sobic006G267000 Sobic001G398500 Sobic001G398500 Sobic001G276900--Sobic001G398500 Sobic001G035000 Sobic001G035000 Sobic001G276900--Sobic001G035000 Sobic001G441100 Sobic001G441100 Sobic001G276900--Sobic001G441100 Sobic001G276900--Sobic007G057700 Sobic003G353800 Sobic003G353800 Sobic001G276900--Sobic003G353800 Sobic001G276900--Sobic004G228900 Sobic006G148000 Sobic006G148000 Sobic001G276900--Sobic006G148000 Sobic002G278500--Sobic004G228900 Sobic002G278500--Sobic001G441100 Sobic002G278500--Sobic001G338600 Sobic002G278500--Sobic005G122500 Sobic009G217600 Sobic009G217600 Sobic002G278500--Sobic009G217600 Sobic002G294700 Sobic002G294700 Sobic002G278500--Sobic002G294700 Sobic002G282300 Sobic002G282300 Sobic002G278500--Sobic002G282300 Sobic001G341600 Sobic001G341600 Sobic002G278500--Sobic001G341600 Sobic008G177800 Sobic008G177800 Sobic002G278500--Sobic008G177800 Sobic006G184800 Sobic006G184800 Sobic004G245850--Sobic006G184800 Sobic009G163900 Sobic009G163900 Sobic004G245850--Sobic009G163900 Sobic006G055600 Sobic006G055600 Sobic004G245850--Sobic006G055600 Sobic008G159100 Sobic008G159100 Sobic004G245850--Sobic008G159100 Sobic004G245850--Sobic001G093200 Sobic004G283201 Sobic004G283201 Sobic004G245850--Sobic004G283201 Sobic002G427400 Sobic002G427400 Sobic004G245850--Sobic002G427400 Sobic001G092600 Sobic001G092600 Sobic004G245850--Sobic001G092600 Sobic004G278200 Sobic004G278200 Sobic004G245850--Sobic004G278200 Sobic001G093200--Sobic009G231400 Sobic001G093200--Sobic004G249900 Sobic001G420100 Sobic001G420100 Sobic001G093200--Sobic001G420100 Sobic001G093200--Sobic005G122500 Sobic001G093200--Sobic009G163900 Sobic001G093200--Sobic004G228900 Sobic001G093200--Sobic004G245850 Sobic001G093200--Sobic001G092600 Sobic001G093200--Sobic006G184800 Sobic007G057700--Sobic001G341600 Sobic007G057700--Sobic001G441100 Sobic007G057700--Sobic002G278500 Sobic007G057700--Sobic009G217600 Sobic007G057700--Sobic006G267000 Sobic002G140300 Sobic002G140300 Sobic007G057700--Sobic002G140300 Sobic006G179500 Sobic006G179500 Sobic007G057700--Sobic006G179500 Sobic006G066200 Sobic006G066200 Sobic007G057700--Sobic006G066200 Sobic004G222500 Sobic004G222500 Sobic007G057700--Sobic004G222500 Sobic004G228900--Sobic005G122500 Sobic004G228900--Sobic001G426000 Sobic004G228900--Sobic002G278500 Sobic004G228900--Sobic001G338600 Sobic004G228900--Sobic003G350700 Sobic004G228900--Sobic004G249900 Sobic004G228900--Sobic003G310700 Sobic004G228900--Sobic010G234700 Sobic010G104300 Sobic010G104300 Sobic004G228900--Sobic010G104300 Sobic008G042900--Sobic001G341600 Sobic008G042900--Sobic009G217600 Sobic008G042900--Sobic001G441100 Sobic008G042900--Sobic002G140300 Sobic002G131800 Sobic002G131800 Sobic008G042900--Sobic002G131800 Sobic004G280900 Sobic004G280900 Sobic008G042900--Sobic004G280900 Sobic009G027900 Sobic009G027900 Sobic008G042900--Sobic009G027900 Sobic008G042900--Sobic006G066200 Sobic001G077400 Sobic001G077400 Sobic008G042900--Sobic001G077400
Octagon: transcription factors


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