Gene annotation
Transcriptome id Sobic.001G440200.1
Synonym ERD7
Functional annotation senescence-associated protein, putative, expressed
UniProt A0A1B6QPE1
Pfam PF06911
Panther DB PTHR21068 PTHR21068:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17840 : Senescence/dehydration-associated protein-related
RAP-DB (Rice) LOC_Os03g13840.2 : senescence-associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a034330 , Zm00025a052917
Brachypodium KQK22588 , KQK22589
Barley HORVU4Hr1G063980.6 , HORVU4Hr1G063980.7 , HORVU4Hr1G063980.3 , HORVU4Hr1G063980.8
Wheat TraesCS7A02G533000 , TraesCS4B02G228000 , TraesCS4D02G228900 , TraesCS4A02G072100 , TraesCS4A02G072100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G283500 MATE domain containing protein, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
3 Sobic.009G194400 expressed protein -
4 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
5 Sobic.001G279701 - -
6 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
7 Sobic.006G170000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
8 Sobic.004G097100 F-box family protein, putative, expressed -
9 Sobic.008G187001 - K09422: transcription factor MYB, plant
10 Sobic.010G104300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
11 Sobic.009G241801 - -
12 Sobic.004G228500 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
14 Sobic.004G352000 cytochrome P450, putative, expressed -
15 Sobic.001G495132 - -
16 Sobic.004G341000 OsFBX66 - F-box domain containing protein, expressed -
17 Sobic.007G155200 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
18 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
19 Sobic.006G267000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
20 Sobic.004G092800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein


Gene co-expression network
sample Sobic001G440200 Sobic001G440200 Sobic010G196600 Sobic010G196600 Sobic001G440200--Sobic010G196600 Sobic004G283500 Sobic004G283500 Sobic001G440200--Sobic004G283500 Sobic009G194400 Sobic009G194400 Sobic001G440200--Sobic009G194400 Sobic001G035100 Sobic001G035100 Sobic001G440200--Sobic001G035100 Sobic001G279701 Sobic001G279701 Sobic001G440200--Sobic001G279701 Sobic003G370600 Sobic003G370600 Sobic001G440200--Sobic003G370600 Sobic006G170000 Sobic006G170000 Sobic001G440200--Sobic006G170000 Sobic004G097100 Sobic004G097100 Sobic001G440200--Sobic004G097100 Sobic008G187001 Sobic008G187001 Sobic001G440200--Sobic008G187001 Sobic010G196600--Sobic009G194400 Sobic001G425500 Sobic001G425500 Sobic010G196600--Sobic001G425500 Sobic004G109700 Sobic004G109700 Sobic010G196600--Sobic004G109700 Sobic010G196600--Sobic004G283500 Sobic002G388900 Sobic002G388900 Sobic010G196600--Sobic002G388900 Sobic003G323201 Sobic003G323201 Sobic010G196600--Sobic003G323201 Sobic010G196600--Sobic008G187001 Sobic001G425600 Sobic001G425600 Sobic010G196600--Sobic001G425600 Sobic004G109600 Sobic004G109600 Sobic010G196600--Sobic004G109600 Sobic004G283500--Sobic010G196600 Sobic007G036900 Sobic007G036900 Sobic004G283500--Sobic007G036900 Sobic001G320900 Sobic001G320900 Sobic004G283500--Sobic001G320900 Sobic001G391500 Sobic001G391500 Sobic004G283500--Sobic001G391500 Sobic009G036000 Sobic009G036000 Sobic004G283500--Sobic009G036000 Sobic002G339000 Sobic002G339000 Sobic004G283500--Sobic002G339000 Sobic004G283500--Sobic001G440200 Sobic007G155200 Sobic007G155200 Sobic004G283500--Sobic007G155200 Sobic003G144700 Sobic003G144700 Sobic004G283500--Sobic003G144700 Sobic009G194400--Sobic010G196600 Sobic009G194400--Sobic001G425500 Sobic009G194400--Sobic003G323201 Sobic009G194400--Sobic001G425600 Sobic009G194400--Sobic003G370600 Sobic009G194400--Sobic004G109700 Sobic009G194400--Sobic004G097100 Sobic009G194400--Sobic002G388900 Sobic004G092800 Sobic004G092800 Sobic009G194400--Sobic004G092800 Sobic002G220000 Sobic002G220000 Sobic001G035100--Sobic002G220000 Sobic003G093000 Sobic003G093000 Sobic001G035100--Sobic003G093000 Sobic003G428700 Sobic003G428700 Sobic001G035100--Sobic003G428700 Sobic004G219800 Sobic004G219800 Sobic001G035100--Sobic004G219800 Sobic004G169200 Sobic004G169200 Sobic001G035100--Sobic004G169200 Sobic001G035100--Sobic004G097100 Sobic004G222500 Sobic004G222500 Sobic001G035100--Sobic004G222500 Sobic009G241801 Sobic009G241801 Sobic001G035100--Sobic009G241801 Sobic001G471200 Sobic001G471200 Sobic001G035100--Sobic001G471200 Sobic004G352000 Sobic004G352000 Sobic001G279701--Sobic004G352000 Sobic001G279701--Sobic003G370600 Sobic001G279701--Sobic006G170000 Sobic004G228500 Sobic004G228500 Sobic001G279701--Sobic004G228500 Sobic010G063033 Sobic010G063033 Sobic001G279701--Sobic010G063033 Sobic002G184200 Sobic002G184200 Sobic001G279701--Sobic002G184200 Sobic001G279701--Sobic001G440200 Sobic001G279701--Sobic008G187001 Sobic009G144600 Sobic009G144600 Sobic001G279701--Sobic009G144600 Sobic003G370600--Sobic006G170000 Sobic003G370600--Sobic004G352000 Sobic003G370600--Sobic009G194400 Sobic001G256700 Sobic001G256700 Sobic003G370600--Sobic001G256700 Sobic003G370600--Sobic004G092800 Sobic004G246600 Sobic004G246600 Sobic003G370600--Sobic004G246600 Sobic009G144700 Sobic009G144700 Sobic003G370600--Sobic009G144700 Sobic004G004500 Sobic004G004500 Sobic003G370600--Sobic004G004500 Sobic003G370600--Sobic002G388900 Sobic006G170000--Sobic003G370600 Sobic006G170000--Sobic004G352000 Sobic006G170000--Sobic001G256700 Sobic006G170000--Sobic004G004500 Sobic006G170000--Sobic008G187001 Sobic006G170000--Sobic004G246600 Sobic006G170000--Sobic004G092800 Sobic006G170000--Sobic002G388900 Sobic006G170000--Sobic009G194400 Sobic003G230100 Sobic003G230100 Sobic004G097100--Sobic003G230100 Sobic004G229500 Sobic004G229500 Sobic004G097100--Sobic004G229500 Sobic004G097100--Sobic004G246600 Sobic006G187900 Sobic006G187900 Sobic004G097100--Sobic006G187900 Sobic004G097100--Sobic009G241801 Sobic005G013500 Sobic005G013500 Sobic004G097100--Sobic005G013500 Sobic004G097100--Sobic002G388900 Sobic004G308900 Sobic004G308900 Sobic004G097100--Sobic004G308900 Sobic002G184300 Sobic002G184300 Sobic004G097100--Sobic002G184300 Sobic008G187001--Sobic002G388900 Sobic008G187001--Sobic001G256700 Sobic008G187001--Sobic007G036900 Sobic009G224100 Sobic009G224100 Sobic008G187001--Sobic009G224100 Sobic008G187001--Sobic004G219800 Sobic009G032000 Sobic009G032000 Sobic008G187001--Sobic009G032000 Sobic001G330100 Sobic001G330100 Sobic008G187001--Sobic001G330100 Sobic009G122400 Sobic009G122400 Sobic008G187001--Sobic009G122400 Sobic008G187001--Sobic004G352000
Octagon: transcription factors


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