Gene annotation
Transcriptome id Sobic.004G341000.4,Sobic.004G341000.2,Sobic.004G341000.3,Sobic.004G341000.1
Synonym Sb04g036850, PP2-B10, AtPP2-B10
Functional annotation OsFBX66 - F-box domain containing protein, expressed
UniProt A0A1Z5RQ94 , C5XV95 , A0A1Z5RQR4 , A0A1Z5RQA2
Pfam PF14299
Panther DB PTHR32278 PTHR32278:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02360 : phloem protein 2-B10
RAP-DB (Rice) LOC_Os02g56840.1,LOC_Os02g56760.1 : OsFBX70 - F-box domain containing protein, expressed,OsFBX66 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a022559
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G057500 flavonol sulfotransferase, putative, expressed -
2 Sobic.002G100832 - -
3 Sobic.001G065900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.009G194400 expressed protein -
5 Sobic.003G060100 expressed protein -
6 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G165800 zinc finger family protein, putative, expressed -
8 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
9 Sobic.008G054150 - -
10 Sobic.004G115500 expressed protein -
11 Sobic.004G228500 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.004G263100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
13 Sobic.004G092800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
14 Sobic.001G279701 - -
15 Sobic.010G063033 - -
16 Sobic.004G037000 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
17 Sobic.004G251800 leaf senescence related protein, putative, expressed -
18 Sobic.007G169500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@Ribosomal protein L1p/L10e family("PubMedID : 26759170,PubMedID : 24597475")@L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
19 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
20 Sobic.001G440200 senescence-associated protein, putative, expressed -


Gene co-expression network
sample Sobic004G341000 Sobic004G341000 Sobic006G057500 Sobic006G057500 Sobic004G341000--Sobic006G057500 Sobic002G100832 Sobic002G100832 Sobic004G341000--Sobic002G100832 Sobic001G065900 Sobic001G065900 Sobic004G341000--Sobic001G065900 Sobic009G194400 Sobic009G194400 Sobic004G341000--Sobic009G194400 Sobic003G060100 Sobic003G060100 Sobic004G341000--Sobic003G060100 Sobic010G196600 Sobic010G196600 Sobic004G341000--Sobic010G196600 Sobic004G165800 Sobic004G165800 Sobic004G341000--Sobic004G165800 Sobic001G425500 Sobic001G425500 Sobic004G341000--Sobic001G425500 Sobic008G054150 Sobic008G054150 Sobic004G341000--Sobic008G054150 Sobic006G057500--Sobic002G100832 Sobic006G057500--Sobic004G165800 Sobic006G057500--Sobic004G341000 Sobic004G263100 Sobic004G263100 Sobic006G057500--Sobic004G263100 Sobic006G057500--Sobic001G065900 Sobic002G102132 Sobic002G102132 Sobic006G057500--Sobic002G102132 Sobic007G159100 Sobic007G159100 Sobic006G057500--Sobic007G159100 Sobic007G169500 Sobic007G169500 Sobic006G057500--Sobic007G169500 Sobic006G057500--Sobic008G054150 Sobic002G100832--Sobic006G057500 Sobic002G100832--Sobic004G263100 Sobic002G100832--Sobic004G165800 Sobic002G100832--Sobic001G065900 Sobic002G100832--Sobic002G102132 Sobic002G100832--Sobic004G341000 Sobic002G100832--Sobic007G159100 Sobic002G100832--Sobic009G194400 Sobic002G100832--Sobic001G425500 Sobic001G065900--Sobic004G263100 Sobic001G065900--Sobic004G165800 Sobic001G065900--Sobic002G100832 Sobic001G065900--Sobic002G102132 Sobic004G092800 Sobic004G092800 Sobic001G065900--Sobic004G092800 Sobic001G065900--Sobic006G057500 Sobic004G251800 Sobic004G251800 Sobic001G065900--Sobic004G251800 Sobic002G388800 Sobic002G388800 Sobic001G065900--Sobic002G388800 Sobic001G065900--Sobic004G341000 Sobic009G194400--Sobic010G196600 Sobic009G194400--Sobic001G425500 Sobic003G323201 Sobic003G323201 Sobic009G194400--Sobic003G323201 Sobic001G425600 Sobic001G425600 Sobic009G194400--Sobic001G425600 Sobic003G370600 Sobic003G370600 Sobic009G194400--Sobic003G370600 Sobic004G109700 Sobic004G109700 Sobic009G194400--Sobic004G109700 Sobic004G097100 Sobic004G097100 Sobic009G194400--Sobic004G097100 Sobic002G388900 Sobic002G388900 Sobic009G194400--Sobic002G388900 Sobic009G194400--Sobic004G092800 Sobic003G060100--Sobic001G065900 Sobic001G487500 Sobic001G487500 Sobic003G060100--Sobic001G487500 Sobic003G060100--Sobic009G194400 Sobic003G060100--Sobic002G388800 Sobic005G013500 Sobic005G013500 Sobic003G060100--Sobic005G013500 Sobic003G112400 Sobic003G112400 Sobic003G060100--Sobic003G112400 Sobic003G060100--Sobic004G251800 Sobic003G060100--Sobic004G341000 Sobic002G238600 Sobic002G238600 Sobic003G060100--Sobic002G238600 Sobic010G196600--Sobic009G194400 Sobic010G196600--Sobic001G425500 Sobic010G196600--Sobic004G109700 Sobic004G283500 Sobic004G283500 Sobic010G196600--Sobic004G283500 Sobic010G196600--Sobic002G388900 Sobic010G196600--Sobic003G323201 Sobic008G187001 Sobic008G187001 Sobic010G196600--Sobic008G187001 Sobic010G196600--Sobic001G425600 Sobic004G109600 Sobic004G109600 Sobic010G196600--Sobic004G109600 Sobic004G165800--Sobic006G057500 Sobic004G165800--Sobic007G159100 Sobic004G165800--Sobic001G065900 Sobic004G165800--Sobic002G102132 Sobic004G165800--Sobic002G100832 Sobic004G165800--Sobic004G263100 Sobic001G327500 Sobic001G327500 Sobic004G165800--Sobic001G327500 Sobic001G381400 Sobic001G381400 Sobic004G165800--Sobic001G381400 Sobic002G090100 Sobic002G090100 Sobic004G165800--Sobic002G090100 Sobic001G425500--Sobic001G425600 Sobic001G425500--Sobic004G109700 Sobic001G425500--Sobic009G194400 Sobic001G425500--Sobic010G196600 Sobic004G273300 Sobic004G273300 Sobic001G425500--Sobic004G273300 Sobic001G425500--Sobic003G323201 Sobic001G425500--Sobic004G092800 Sobic001G425500--Sobic004G109600 Sobic001G481300 Sobic001G481300 Sobic001G425500--Sobic001G481300 Sobic008G054150--Sobic007G169500 Sobic001G260000 Sobic001G260000 Sobic008G054150--Sobic001G260000 Sobic001G343601 Sobic001G343601 Sobic008G054150--Sobic001G343601 Sobic009G009400 Sobic009G009400 Sobic008G054150--Sobic009G009400 Sobic004G115500 Sobic004G115500 Sobic008G054150--Sobic004G115500 Sobic002G146100 Sobic002G146100 Sobic008G054150--Sobic002G146100 Sobic008G054150--Sobic006G057500 Sobic008G054150--Sobic004G341000 Sobic004G311750 Sobic004G311750 Sobic008G054150--Sobic004G311750
Octagon: transcription factors


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