Gene annotation
Transcriptome id Sobic.008G054150.1
Synonym -
Functional annotation -
UniProt A0A1Z5R5H7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G169500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@Ribosomal protein L1p/L10e family("PubMedID : 26759170,PubMedID : 24597475")@L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
2 Sobic.001G260000 SAP domain containing protein, expressed -
3 Sobic.001G343601 - K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
4 Sobic.009G009400 expressed protein -
5 Sobic.004G115500 expressed protein -
6 Sobic.002G146100 - -
7 Sobic.006G057500 flavonol sulfotransferase, putative, expressed -
8 Sobic.004G341000 OsFBX66 - F-box domain containing protein, expressed -
9 Sobic.004G311750 - -
10 Sobic.001G357100 ZOS9-11 - C2H2 zinc finger protein, expressed -
11 Sobic.007G158700 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@phospholipase A("PubMedID : 26759170,PubMedID : 24597475")@patatin, putative, expressed -
12 Sobic.001G342700 protein phosphotase protein, putative, expressed -
13 Sobic.002G100832 - -
14 Sobic.009G043700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.006G033260 - -
16 Sobic.001G279701 - -
17 Sobic.010G179400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed K08237: hydroquinone glucosyltransferase
18 Sobic.008G029400 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@WRKY DNA-binding protein 55("PubMedID : 26759170,PubMedID : 24597475")@WRKY46, expressed -
19 Sobic.006G091800 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
20 Sobic.002G182500 nucleic acid binding protein, putative, expressed -


Gene co-expression network
sample Sobic008G054150 Sobic008G054150 Sobic007G169500 Sobic007G169500 Sobic008G054150--Sobic007G169500 Sobic001G260000 Sobic001G260000 Sobic008G054150--Sobic001G260000 Sobic001G343601 Sobic001G343601 Sobic008G054150--Sobic001G343601 Sobic009G009400 Sobic009G009400 Sobic008G054150--Sobic009G009400 Sobic004G115500 Sobic004G115500 Sobic008G054150--Sobic004G115500 Sobic002G146100 Sobic002G146100 Sobic008G054150--Sobic002G146100 Sobic006G057500 Sobic006G057500 Sobic008G054150--Sobic006G057500 Sobic004G341000 Sobic004G341000 Sobic008G054150--Sobic004G341000 Sobic004G311750 Sobic004G311750 Sobic008G054150--Sobic004G311750 Sobic007G169500--Sobic008G054150 Sobic007G169500--Sobic009G009400 Sobic007G169500--Sobic001G343601 Sobic007G169500--Sobic004G115500 Sobic007G169500--Sobic001G260000 Sobic001G357100 Sobic001G357100 Sobic007G169500--Sobic001G357100 Sobic007G169500--Sobic006G057500 Sobic009G043700 Sobic009G043700 Sobic007G169500--Sobic009G043700 Sobic007G169500--Sobic002G146100 Sobic001G260000--Sobic008G054150 Sobic001G260000--Sobic001G343601 Sobic001G260000--Sobic007G169500 Sobic001G260000--Sobic009G009400 Sobic001G260000--Sobic004G311750 Sobic001G260000--Sobic004G115500 Sobic001G260000--Sobic002G146100 Sobic008G029400 Sobic008G029400 Sobic001G260000--Sobic008G029400 Sobic002G182500 Sobic002G182500 Sobic001G260000--Sobic002G182500 Sobic001G343601--Sobic009G009400 Sobic001G343601--Sobic008G054150 Sobic001G342700 Sobic001G342700 Sobic001G343601--Sobic001G342700 Sobic001G343601--Sobic001G260000 Sobic001G343601--Sobic007G169500 Sobic001G343601--Sobic002G146100 Sobic001G343601--Sobic004G115500 Sobic006G033260 Sobic006G033260 Sobic001G343601--Sobic006G033260 Sobic007G158700 Sobic007G158700 Sobic001G343601--Sobic007G158700 Sobic009G009400--Sobic001G343601 Sobic009G009400--Sobic007G169500 Sobic009G009400--Sobic008G054150 Sobic009G009400--Sobic001G342700 Sobic009G009400--Sobic009G043700 Sobic009G009400--Sobic004G115500 Sobic009G009400--Sobic001G260000 Sobic009G009400--Sobic002G146100 Sobic009G009400--Sobic002G182500 Sobic004G115500--Sobic001G357100 Sobic004G115500--Sobic007G169500 Sobic004G115500--Sobic008G054150 Sobic004G115500--Sobic009G009400 Sobic004G115500--Sobic001G343601 Sobic004G115500--Sobic009G043700 Sobic010G084600 Sobic010G084600 Sobic004G115500--Sobic010G084600 Sobic004G115500--Sobic004G341000 Sobic004G037000 Sobic004G037000 Sobic004G115500--Sobic004G037000 Sobic002G146100--Sobic001G343601 Sobic002G146100--Sobic001G342700 Sobic002G146100--Sobic009G009400 Sobic002G146100--Sobic008G054150 Sobic002G146100--Sobic001G260000 Sobic002G146100--Sobic006G033260 Sobic002G146100--Sobic007G169500 Sobic001G343832 Sobic001G343832 Sobic002G146100--Sobic001G343832 Sobic002G146100--Sobic002G182500 Sobic002G100832 Sobic002G100832 Sobic006G057500--Sobic002G100832 Sobic004G165800 Sobic004G165800 Sobic006G057500--Sobic004G165800 Sobic006G057500--Sobic004G341000 Sobic004G263100 Sobic004G263100 Sobic006G057500--Sobic004G263100 Sobic001G065900 Sobic001G065900 Sobic006G057500--Sobic001G065900 Sobic002G102132 Sobic002G102132 Sobic006G057500--Sobic002G102132 Sobic007G159100 Sobic007G159100 Sobic006G057500--Sobic007G159100 Sobic006G057500--Sobic007G169500 Sobic006G057500--Sobic008G054150 Sobic004G341000--Sobic006G057500 Sobic004G341000--Sobic002G100832 Sobic004G341000--Sobic001G065900 Sobic009G194400 Sobic009G194400 Sobic004G341000--Sobic009G194400 Sobic003G060100 Sobic003G060100 Sobic004G341000--Sobic003G060100 Sobic010G196600 Sobic010G196600 Sobic004G341000--Sobic010G196600 Sobic004G341000--Sobic004G165800 Sobic001G425500 Sobic001G425500 Sobic004G341000--Sobic001G425500 Sobic004G341000--Sobic008G054150 Sobic004G311750--Sobic001G260000 Sobic004G311750--Sobic008G054150 Sobic004G311750--Sobic001G343601 Sobic010G004200 Sobic010G004200 Sobic004G311750--Sobic010G004200 Sobic004G311750--Sobic007G169500 Sobic004G169966 Sobic004G169966 Sobic004G311750--Sobic004G169966 Sobic004G311750--Sobic009G009400 Sobic004G311750--Sobic008G029400 Sobic004G311750--Sobic004G341000
Octagon: transcription factors


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