Gene annotation
Transcriptome id Sobic.008G029400.2,Sobic.008G029400.1
Synonym WRKY46, ATWRKY46, Sb08g002590,
Functional annotation expressed high in San Chi San (an efficient nitrogen user) (PubMedID : 28697783)
WRKY DNA-binding protein 55( (PubMedID : 26759170,(PubMedID : 24597475)
WRKY46, expressed
UniProt A0A1B6PAY6
Pfam PF03106
Panther DB PTHR31282 PTHR31282:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G46400 : WRKY DNA-binding protein 46
RAP-DB (Rice) LOC_Os11g02480.2,LOC_Os11g02480.1 : WRKY46, expressed
MaizeGDB (Corn) Zm00025a033311
Brachypodium KQJ89441 , KQJ89443 , KQJ89442 , PNT64188
Barley HORVU4Hr1G022970.7 , HORVU4Hr1G022970.4 , HORVU4Hr1G022970.5 , HORVU4Hr1G022970.2 , HORVU4Hr1G022970.3 , HORVU4Hr1G022970.8
Wheat TraesCS4B02G121500 , TraesCS4D02G119700 , TraesCS4A02G193600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G228500 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.001G260000 SAP domain containing protein, expressed -
3 Sobic.003G060100 expressed protein -
4 Sobic.009G144700 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.008G054150 - -
6 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
7 Sobic.006G207000 expressed protein -
8 Sobic.006G104700 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
9 Sobic.003G211400 OsFBX313 - F-box domain containing protein, expressed -
10 Sobic.003G148300 pectinesterase, putative, expressed K01051: pectinesterase
11 Sobic.003G112400 expressed protein -
12 Sobic.004G086400 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
13 Sobic.002G327400 TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed -
14 Sobic.004G352000 cytochrome P450, putative, expressed -
15 Sobic.004G341000 OsFBX66 - F-box domain containing protein, expressed -
16 Sobic.002G379100 dehydrogenase, putative, expressed -
17 Sobic.004G251800 leaf senescence related protein, putative, expressed -
18 Sobic.001G279701 - -
19 Sobic.001G487300 expressed protein -
20 Sobic.005G223450 - -


Gene co-expression network
sample Sobic008G029400 Sobic008G029400 Sobic004G228500 Sobic004G228500 Sobic008G029400--Sobic004G228500 Sobic001G260000 Sobic001G260000 Sobic008G029400--Sobic001G260000 Sobic003G060100 Sobic003G060100 Sobic008G029400--Sobic003G060100 Sobic009G144700 Sobic009G144700 Sobic008G029400--Sobic009G144700 Sobic008G054150 Sobic008G054150 Sobic008G029400--Sobic008G054150 Sobic004G108200 Sobic004G108200 Sobic008G029400--Sobic004G108200 Sobic006G207000 Sobic006G207000 Sobic008G029400--Sobic006G207000 Sobic006G104700 Sobic006G104700 Sobic008G029400--Sobic006G104700 Sobic003G211400 Sobic003G211400 Sobic008G029400--Sobic003G211400 Sobic004G228500--Sobic009G144700 Sobic004G228500--Sobic004G108200 Sobic004G352000 Sobic004G352000 Sobic004G228500--Sobic004G352000 Sobic001G330100 Sobic001G330100 Sobic004G228500--Sobic001G330100 Sobic001G471200 Sobic001G471200 Sobic004G228500--Sobic001G471200 Sobic007G155200 Sobic007G155200 Sobic004G228500--Sobic007G155200 Sobic009G183900 Sobic009G183900 Sobic004G228500--Sobic009G183900 Sobic003G148300 Sobic003G148300 Sobic004G228500--Sobic003G148300 Sobic002G388900 Sobic002G388900 Sobic004G228500--Sobic002G388900 Sobic001G260000--Sobic008G054150 Sobic001G343601 Sobic001G343601 Sobic001G260000--Sobic001G343601 Sobic007G169500 Sobic007G169500 Sobic001G260000--Sobic007G169500 Sobic009G009400 Sobic009G009400 Sobic001G260000--Sobic009G009400 Sobic004G311750 Sobic004G311750 Sobic001G260000--Sobic004G311750 Sobic004G115500 Sobic004G115500 Sobic001G260000--Sobic004G115500 Sobic002G146100 Sobic002G146100 Sobic001G260000--Sobic002G146100 Sobic001G260000--Sobic008G029400 Sobic002G182500 Sobic002G182500 Sobic001G260000--Sobic002G182500 Sobic001G065900 Sobic001G065900 Sobic003G060100--Sobic001G065900 Sobic001G487500 Sobic001G487500 Sobic003G060100--Sobic001G487500 Sobic009G194400 Sobic009G194400 Sobic003G060100--Sobic009G194400 Sobic002G388800 Sobic002G388800 Sobic003G060100--Sobic002G388800 Sobic005G013500 Sobic005G013500 Sobic003G060100--Sobic005G013500 Sobic003G112400 Sobic003G112400 Sobic003G060100--Sobic003G112400 Sobic004G251800 Sobic004G251800 Sobic003G060100--Sobic004G251800 Sobic004G341000 Sobic004G341000 Sobic003G060100--Sobic004G341000 Sobic002G238600 Sobic002G238600 Sobic003G060100--Sobic002G238600 Sobic009G144700--Sobic004G108200 Sobic009G144700--Sobic001G330100 Sobic009G144700--Sobic002G388900 Sobic009G144700--Sobic004G352000 Sobic001G256700 Sobic001G256700 Sobic009G144700--Sobic001G256700 Sobic001G330200 Sobic001G330200 Sobic009G144700--Sobic001G330200 Sobic009G144700--Sobic003G148300 Sobic004G294400 Sobic004G294400 Sobic009G144700--Sobic004G294400 Sobic002G395300 Sobic002G395300 Sobic009G144700--Sobic002G395300 Sobic008G054150--Sobic007G169500 Sobic008G054150--Sobic001G260000 Sobic008G054150--Sobic001G343601 Sobic008G054150--Sobic009G009400 Sobic008G054150--Sobic004G115500 Sobic008G054150--Sobic002G146100 Sobic006G057500 Sobic006G057500 Sobic008G054150--Sobic006G057500 Sobic008G054150--Sobic004G341000 Sobic008G054150--Sobic004G311750 Sobic004G108200--Sobic003G148300 Sobic004G108200--Sobic009G144700 Sobic004G108200--Sobic004G294400 Sobic004G108200--Sobic001G256700 Sobic004G108200--Sobic001G330100 Sobic004G004500 Sobic004G004500 Sobic004G108200--Sobic004G004500 Sobic004G108200--Sobic002G395300 Sobic001G195200 Sobic001G195200 Sobic004G108200--Sobic001G195200 Sobic002G234400 Sobic002G234400 Sobic004G108200--Sobic002G234400 Sobic003G116800 Sobic003G116800 Sobic006G207000--Sobic003G116800 Sobic004G086400 Sobic004G086400 Sobic006G207000--Sobic004G086400 Sobic006G207100 Sobic006G207100 Sobic006G207000--Sobic006G207100 Sobic010G196600 Sobic010G196600 Sobic006G207000--Sobic010G196600 Sobic002G339000 Sobic002G339000 Sobic006G207000--Sobic002G339000 Sobic006G207000--Sobic003G148300 Sobic001G425500 Sobic001G425500 Sobic006G207000--Sobic001G425500 Sobic006G207000--Sobic007G155200 Sobic006G207000--Sobic004G004500 Sobic006G104700--Sobic002G238600 Sobic006G104700--Sobic003G112400 Sobic002G390000 Sobic002G390000 Sobic006G104700--Sobic002G390000 Sobic006G104700--Sobic003G060100 Sobic006G277800 Sobic006G277800 Sobic006G104700--Sobic006G277800 Sobic006G072201 Sobic006G072201 Sobic006G104700--Sobic006G072201 Sobic006G104700--Sobic001G065900 Sobic005G110406 Sobic005G110406 Sobic006G104700--Sobic005G110406 Sobic010G135100 Sobic010G135100 Sobic006G104700--Sobic010G135100 Sobic003G211400--Sobic008G029400 Sobic009G003400 Sobic009G003400 Sobic003G211400--Sobic009G003400 Sobic003G211400--Sobic001G260000 Sobic003G076001 Sobic003G076001 Sobic003G211400--Sobic003G076001 Sobic007G039500 Sobic007G039500 Sobic003G211400--Sobic007G039500 Sobic005G203750 Sobic005G203750 Sobic003G211400--Sobic005G203750 Sobic001G331301 Sobic001G331301 Sobic003G211400--Sobic001G331301 Sobic004G071650 Sobic004G071650 Sobic003G211400--Sobic004G071650 Sobic002G254000 Sobic002G254000 Sobic003G211400--Sobic002G254000
Octagon: transcription factors


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