Gene annotation
Transcriptome id Sobic.003G112400.1
Synonym Sb03g009450
Functional annotation expressed protein
UniProt C5XFR1
Pfam -
Panther DB PTHR22814 PTHR22814:SF118
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01490 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os01g14700.1 : expressed protein
MaizeGDB (Corn) Zm00025a023915 , Zm00025a023916
Brachypodium PNT70253 , PNT70254
Barley HORVU3Hr1G034130.1 , HORVU5Hr1G051560.2 , HORVU5Hr1G051560.3 , HORVU5Hr1G051560.1 , HORVU5Hr1G051560.4 , HORVU5Hr1G051580.1 , HORVU5Hr1G051580.2 , HORVU5Hr1G051580.3 , HORVU3Hr1G034120.1 , HORVU3Hr1G034160.1 , HORVU3Hr1G034160.3 , HORVU3Hr1G034160.2
Wheat TraesCS3A02G165400 , TraesCS3B02G200300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G060100 expressed protein -
2 Sobic.010G135100 expressed protein -
3 Sobic.002G238600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
4 Sobic.006G104700 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
5 Sobic.001G487500 expressed protein -
6 Sobic.002G327400 TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.002G234400 white-brown complex homolog protein 11, putative, expressed -
8 Sobic.001G232500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
9 Sobic.002G390000 dirigent, putative, expressed -
10 Sobic.008G029400 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@WRKY DNA-binding protein 55("PubMedID : 26759170,PubMedID : 24597475")@WRKY46, expressed -
11 Sobic.007G006300 expressed protein -
12 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
13 Sobic.004G086400 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
14 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
15 Sobic.005G110406 - K16223: protein FLOWERING LOCUS T
16 Sobic.002G327201 - -
17 Sobic.001G425600 "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
18 Sobic.009G183900 ICE-like protease p20 domain containing protein, putative, expressed -
19 Sobic.008G102900 expressed protein -
20 Sobic.009G194400 expressed protein -


Gene co-expression network
sample Sobic003G112400 Sobic003G112400 Sobic003G060100 Sobic003G060100 Sobic003G112400--Sobic003G060100 Sobic010G135100 Sobic010G135100 Sobic003G112400--Sobic010G135100 Sobic002G238600 Sobic002G238600 Sobic003G112400--Sobic002G238600 Sobic006G104700 Sobic006G104700 Sobic003G112400--Sobic006G104700 Sobic001G487500 Sobic001G487500 Sobic003G112400--Sobic001G487500 Sobic002G327400 Sobic002G327400 Sobic003G112400--Sobic002G327400 Sobic002G234400 Sobic002G234400 Sobic003G112400--Sobic002G234400 Sobic001G232500 Sobic001G232500 Sobic003G112400--Sobic001G232500 Sobic002G390000 Sobic002G390000 Sobic003G112400--Sobic002G390000 Sobic001G065900 Sobic001G065900 Sobic003G060100--Sobic001G065900 Sobic003G060100--Sobic001G487500 Sobic009G194400 Sobic009G194400 Sobic003G060100--Sobic009G194400 Sobic002G388800 Sobic002G388800 Sobic003G060100--Sobic002G388800 Sobic005G013500 Sobic005G013500 Sobic003G060100--Sobic005G013500 Sobic003G060100--Sobic003G112400 Sobic004G251800 Sobic004G251800 Sobic003G060100--Sobic004G251800 Sobic004G341000 Sobic004G341000 Sobic003G060100--Sobic004G341000 Sobic003G060100--Sobic002G238600 Sobic005G110406 Sobic005G110406 Sobic010G135100--Sobic005G110406 Sobic005G180500 Sobic005G180500 Sobic010G135100--Sobic005G180500 Sobic010G135100--Sobic002G234400 Sobic010G135100--Sobic003G112400 Sobic004G229400 Sobic004G229400 Sobic010G135100--Sobic004G229400 Sobic010G135100--Sobic002G238600 Sobic006G277800 Sobic006G277800 Sobic010G135100--Sobic006G277800 Sobic010G135100--Sobic001G487500 Sobic007G090460 Sobic007G090460 Sobic010G135100--Sobic007G090460 Sobic002G238600--Sobic002G390000 Sobic001G381400 Sobic001G381400 Sobic002G238600--Sobic001G381400 Sobic002G238600--Sobic005G180500 Sobic002G238600--Sobic006G104700 Sobic002G238600--Sobic002G388800 Sobic002G238600--Sobic001G065900 Sobic004G263100 Sobic004G263100 Sobic002G238600--Sobic004G263100 Sobic002G238600--Sobic003G060100 Sobic004G094900 Sobic004G094900 Sobic002G238600--Sobic004G094900 Sobic006G104700--Sobic002G238600 Sobic006G104700--Sobic003G112400 Sobic006G104700--Sobic002G390000 Sobic006G104700--Sobic003G060100 Sobic006G104700--Sobic006G277800 Sobic006G072201 Sobic006G072201 Sobic006G104700--Sobic006G072201 Sobic006G104700--Sobic001G065900 Sobic006G104700--Sobic005G110406 Sobic006G104700--Sobic010G135100 Sobic001G487500--Sobic002G234400 Sobic001G487500--Sobic003G060100 Sobic009G183900 Sobic009G183900 Sobic001G487500--Sobic009G183900 Sobic007G006300 Sobic007G006300 Sobic001G487500--Sobic007G006300 Sobic003G148300 Sobic003G148300 Sobic001G487500--Sobic003G148300 Sobic004G108200 Sobic004G108200 Sobic001G487500--Sobic004G108200 Sobic001G195200 Sobic001G195200 Sobic001G487500--Sobic001G195200 Sobic002G250000 Sobic002G250000 Sobic001G487500--Sobic002G250000 Sobic002G327201 Sobic002G327201 Sobic001G487500--Sobic002G327201 Sobic002G327400--Sobic003G112400 Sobic002G327400--Sobic003G060100 Sobic002G327400--Sobic002G327201 Sobic002G327400--Sobic001G487500 Sobic001G086000 Sobic001G086000 Sobic002G327400--Sobic001G086000 Sobic002G327400--Sobic002G238600 Sobic002G327400--Sobic010G135100 Sobic002G327400--Sobic002G234400 Sobic008G077550 Sobic008G077550 Sobic002G327400--Sobic008G077550 Sobic002G234400--Sobic009G183900 Sobic002G234400--Sobic004G108200 Sobic002G234400--Sobic002G250000 Sobic002G234400--Sobic004G229400 Sobic002G234400--Sobic003G148300 Sobic002G234400--Sobic001G195200 Sobic002G234400--Sobic001G487500 Sobic006G198700 Sobic006G198700 Sobic002G234400--Sobic006G198700 Sobic004G086400 Sobic004G086400 Sobic002G234400--Sobic004G086400 Sobic004G092800 Sobic004G092800 Sobic001G232500--Sobic004G092800 Sobic008G102900 Sobic008G102900 Sobic001G232500--Sobic008G102900 Sobic001G425500 Sobic001G425500 Sobic001G232500--Sobic001G425500 Sobic001G425600 Sobic001G425600 Sobic001G232500--Sobic001G425600 Sobic002G369301 Sobic002G369301 Sobic001G232500--Sobic002G369301 Sobic001G187400 Sobic001G187400 Sobic001G232500--Sobic001G187400 Sobic003G370600 Sobic003G370600 Sobic001G232500--Sobic003G370600 Sobic001G232500--Sobic002G388800 Sobic001G232500--Sobic003G112400 Sobic002G390000--Sobic002G238600 Sobic002G390000--Sobic001G381400 Sobic002G390000--Sobic004G094900 Sobic002G090100 Sobic002G090100 Sobic002G390000--Sobic002G090100
Octagon: transcription factors


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