Gene annotation
Transcriptome id Sobic.001G232500.1
Synonym Sb01g020380
Functional annotation glycine-rich cell wall structural protein 2 precursor, putative, expressed
UniProt C5WZJ5
Pfam -
Panther DB PTHR33548 PTHR33548:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g31540.1 : glycine-rich cell wall structural protein 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a006741
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G092800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
2 Sobic.008G102900 expressed protein -
3 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
4 Sobic.001G425600 "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
5 Sobic.002G369301 - -
6 Sobic.001G187400 cytochrome P450, putative, expressed -
7 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
8 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
9 Sobic.003G112400 expressed protein -
10 Sobic.006G170000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
11 Sobic.009G194400 expressed protein -
12 Sobic.002G238600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
13 Sobic.004G109700 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.010G104300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
15 Sobic.002G284000 pyridoxal-dependent decarboxylase protein, putative, expressed K01581: E4.1.1.17, ODC1, speC, ornithine decarboxylase
16 Sobic.001G279350 - -
17 Sobic.005G050032 - -
18 Sobic.001G065900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.001G187500 cytochrome P450, putative, expressed -
20 Sobic.002G234400 white-brown complex homolog protein 11, putative, expressed -


Gene co-expression network
sample Sobic001G232500 Sobic001G232500 Sobic004G092800 Sobic004G092800 Sobic001G232500--Sobic004G092800 Sobic008G102900 Sobic008G102900 Sobic001G232500--Sobic008G102900 Sobic001G425500 Sobic001G425500 Sobic001G232500--Sobic001G425500 Sobic001G425600 Sobic001G425600 Sobic001G232500--Sobic001G425600 Sobic002G369301 Sobic002G369301 Sobic001G232500--Sobic002G369301 Sobic001G187400 Sobic001G187400 Sobic001G232500--Sobic001G187400 Sobic003G370600 Sobic003G370600 Sobic001G232500--Sobic003G370600 Sobic002G388800 Sobic002G388800 Sobic001G232500--Sobic002G388800 Sobic003G112400 Sobic003G112400 Sobic001G232500--Sobic003G112400 Sobic004G092800--Sobic001G232500 Sobic001G065900 Sobic001G065900 Sobic004G092800--Sobic001G065900 Sobic004G092800--Sobic003G370600 Sobic004G092800--Sobic002G388800 Sobic004G092800--Sobic001G425500 Sobic004G263100 Sobic004G263100 Sobic004G092800--Sobic004G263100 Sobic009G194400 Sobic009G194400 Sobic004G092800--Sobic009G194400 Sobic004G092800--Sobic002G369301 Sobic006G170000 Sobic006G170000 Sobic004G092800--Sobic006G170000 Sobic008G102900--Sobic001G232500 Sobic008G102900--Sobic001G425600 Sobic008G102900--Sobic001G425500 Sobic004G004500 Sobic004G004500 Sobic008G102900--Sobic004G004500 Sobic002G339000 Sobic002G339000 Sobic008G102900--Sobic002G339000 Sobic008G102900--Sobic004G092800 Sobic002G284000 Sobic002G284000 Sobic008G102900--Sobic002G284000 Sobic009G189501 Sobic009G189501 Sobic008G102900--Sobic009G189501 Sobic004G086400 Sobic004G086400 Sobic008G102900--Sobic004G086400 Sobic001G425500--Sobic001G425600 Sobic004G109700 Sobic004G109700 Sobic001G425500--Sobic004G109700 Sobic001G425500--Sobic009G194400 Sobic010G196600 Sobic010G196600 Sobic001G425500--Sobic010G196600 Sobic004G273300 Sobic004G273300 Sobic001G425500--Sobic004G273300 Sobic003G323201 Sobic003G323201 Sobic001G425500--Sobic003G323201 Sobic001G425500--Sobic004G092800 Sobic004G109600 Sobic004G109600 Sobic001G425500--Sobic004G109600 Sobic001G481300 Sobic001G481300 Sobic001G425500--Sobic001G481300 Sobic001G425600--Sobic001G425500 Sobic001G425600--Sobic004G109700 Sobic001G425600--Sobic004G273300 Sobic001G425600--Sobic009G194400 Sobic001G425600--Sobic004G109600 Sobic001G425600--Sobic001G481300 Sobic001G425600--Sobic010G196600 Sobic001G279350 Sobic001G279350 Sobic001G425600--Sobic001G279350 Sobic001G425600--Sobic003G323201 Sobic002G369301--Sobic001G187400 Sobic002G369301--Sobic004G092800 Sobic002G369301--Sobic003G370600 Sobic002G369301--Sobic006G170000 Sobic002G369301--Sobic001G232500 Sobic001G279701 Sobic001G279701 Sobic002G369301--Sobic001G279701 Sobic001G187500 Sobic001G187500 Sobic002G369301--Sobic001G187500 Sobic002G369301--Sobic001G425500 Sobic004G352000 Sobic004G352000 Sobic002G369301--Sobic004G352000 Sobic001G187400--Sobic001G187500 Sobic001G187400--Sobic002G369301 Sobic001G187400--Sobic003G370600 Sobic001G187400--Sobic002G388800 Sobic001G187400--Sobic004G092800 Sobic001G187400--Sobic001G232500 Sobic007G039500 Sobic007G039500 Sobic001G187400--Sobic007G039500 Sobic001G187400--Sobic006G170000 Sobic009G123733 Sobic009G123733 Sobic001G187400--Sobic009G123733 Sobic003G370600--Sobic006G170000 Sobic003G370600--Sobic004G352000 Sobic003G370600--Sobic009G194400 Sobic001G256700 Sobic001G256700 Sobic003G370600--Sobic001G256700 Sobic003G370600--Sobic004G092800 Sobic004G246600 Sobic004G246600 Sobic003G370600--Sobic004G246600 Sobic009G144700 Sobic009G144700 Sobic003G370600--Sobic009G144700 Sobic003G370600--Sobic004G004500 Sobic002G388900 Sobic002G388900 Sobic003G370600--Sobic002G388900 Sobic002G388800--Sobic004G263100 Sobic005G171001 Sobic005G171001 Sobic002G388800--Sobic005G171001 Sobic002G388800--Sobic004G092800 Sobic002G388800--Sobic001G065900 Sobic001G381400 Sobic001G381400 Sobic002G388800--Sobic001G381400 Sobic002G390000 Sobic002G390000 Sobic002G388800--Sobic002G390000 Sobic002G102132 Sobic002G102132 Sobic002G388800--Sobic002G102132 Sobic007G159100 Sobic007G159100 Sobic002G388800--Sobic007G159100 Sobic004G251800 Sobic004G251800 Sobic002G388800--Sobic004G251800 Sobic003G060100 Sobic003G060100 Sobic003G112400--Sobic003G060100 Sobic010G135100 Sobic010G135100 Sobic003G112400--Sobic010G135100 Sobic002G238600 Sobic002G238600 Sobic003G112400--Sobic002G238600 Sobic006G104700 Sobic006G104700 Sobic003G112400--Sobic006G104700 Sobic001G487500 Sobic001G487500 Sobic003G112400--Sobic001G487500 Sobic002G327400 Sobic002G327400 Sobic003G112400--Sobic002G327400 Sobic002G234400 Sobic002G234400 Sobic003G112400--Sobic002G234400 Sobic003G112400--Sobic001G232500 Sobic003G112400--Sobic002G390000
Octagon: transcription factors


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