Gene annotation
Transcriptome id Sobic.001G279350.1
Synonym -
Functional annotation -
UniProt A0A1Z5S7Z5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G481300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
2 Sobic.004G109600 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.007G147700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR33 - Auxin-responsive SAUR gene family member, expressed -
4 Sobic.003G355100 expressed protein -
5 Sobic.001G425600 "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
6 Sobic.004G109700 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.003G197200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
8 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
9 Sobic.007G214600 EF hand family protein, putative, expressed -
10 Sobic.001G201200 - -
11 Sobic.010G198500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G284000 pyridoxal-dependent decarboxylase protein, putative, expressed K01581: E4.1.1.17, ODC1, speC, ornithine decarboxylase
13 Sobic.001G371800 expressed protein -
14 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
15 Sobic.001G105900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
16 Sobic.004G166200 expressed protein -
17 Sobic.001G443800 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
18 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.007G006300 expressed protein -
20 Sobic.008G102900 expressed protein -


Gene co-expression network
sample Sobic001G279350 Sobic001G279350 Sobic001G481300 Sobic001G481300 Sobic001G279350--Sobic001G481300 Sobic004G109600 Sobic004G109600 Sobic001G279350--Sobic004G109600 Sobic007G147700 Sobic007G147700 Sobic001G279350--Sobic007G147700 Sobic003G355100 Sobic003G355100 Sobic001G279350--Sobic003G355100 Sobic001G425600 Sobic001G425600 Sobic001G279350--Sobic001G425600 Sobic004G109700 Sobic004G109700 Sobic001G279350--Sobic004G109700 Sobic003G197200 Sobic003G197200 Sobic001G279350--Sobic003G197200 Sobic001G425500 Sobic001G425500 Sobic001G279350--Sobic001G425500 Sobic007G214600 Sobic007G214600 Sobic001G279350--Sobic007G214600 Sobic001G481300--Sobic003G355100 Sobic001G481300--Sobic004G109600 Sobic001G481300--Sobic003G197200 Sobic001G481300--Sobic007G214600 Sobic001G481300--Sobic001G279350 Sobic001G481300--Sobic004G109700 Sobic003G148600 Sobic003G148600 Sobic001G481300--Sobic003G148600 Sobic001G371800 Sobic001G371800 Sobic001G481300--Sobic001G371800 Sobic010G198500 Sobic010G198500 Sobic001G481300--Sobic010G198500 Sobic004G109600--Sobic001G481300 Sobic004G109600--Sobic003G355100 Sobic004G109600--Sobic007G214600 Sobic004G109600--Sobic004G109700 Sobic004G109600--Sobic003G197200 Sobic004G109600--Sobic010G198500 Sobic004G109600--Sobic003G148600 Sobic004G109600--Sobic001G371800 Sobic001G201200 Sobic001G201200 Sobic004G109600--Sobic001G201200 Sobic007G147700--Sobic010G198500 Sobic007G147700--Sobic003G197200 Sobic007G147700--Sobic001G201200 Sobic001G443800 Sobic001G443800 Sobic007G147700--Sobic001G443800 Sobic007G147700--Sobic007G214600 Sobic001G105900 Sobic001G105900 Sobic007G147700--Sobic001G105900 Sobic007G147700--Sobic001G481300 Sobic007G147700--Sobic003G355100 Sobic007G147700--Sobic001G279350 Sobic003G355100--Sobic007G214600 Sobic003G355100--Sobic003G197200 Sobic003G355100--Sobic001G481300 Sobic003G355100--Sobic003G148600 Sobic003G355100--Sobic004G109600 Sobic003G394400 Sobic003G394400 Sobic003G355100--Sobic003G394400 Sobic001G108200 Sobic001G108200 Sobic003G355100--Sobic001G108200 Sobic003G144700 Sobic003G144700 Sobic003G355100--Sobic003G144700 Sobic004G166200 Sobic004G166200 Sobic003G355100--Sobic004G166200 Sobic001G425600--Sobic001G425500 Sobic001G425600--Sobic004G109700 Sobic004G273300 Sobic004G273300 Sobic001G425600--Sobic004G273300 Sobic009G194400 Sobic009G194400 Sobic001G425600--Sobic009G194400 Sobic001G425600--Sobic004G109600 Sobic001G425600--Sobic001G481300 Sobic010G196600 Sobic010G196600 Sobic001G425600--Sobic010G196600 Sobic001G425600--Sobic001G279350 Sobic003G323201 Sobic003G323201 Sobic001G425600--Sobic003G323201 Sobic004G109700--Sobic004G109600 Sobic004G109700--Sobic001G425600 Sobic004G109700--Sobic001G425500 Sobic004G109700--Sobic001G481300 Sobic004G109700--Sobic010G196600 Sobic004G109700--Sobic009G194400 Sobic004G109700--Sobic003G323201 Sobic004G109700--Sobic007G214600 Sobic004G109700--Sobic001G279350 Sobic003G197200--Sobic003G148600 Sobic003G197200--Sobic007G214600 Sobic003G197200--Sobic003G355100 Sobic003G197200--Sobic003G144700 Sobic003G197200--Sobic001G443800 Sobic003G197200--Sobic001G481300 Sobic003G197200--Sobic001G201200 Sobic003G197200--Sobic004G109600 Sobic003G123600 Sobic003G123600 Sobic003G197200--Sobic003G123600 Sobic001G425500--Sobic001G425600 Sobic001G425500--Sobic004G109700 Sobic001G425500--Sobic009G194400 Sobic001G425500--Sobic010G196600 Sobic001G425500--Sobic004G273300 Sobic001G425500--Sobic003G323201 Sobic004G092800 Sobic004G092800 Sobic001G425500--Sobic004G092800 Sobic001G425500--Sobic004G109600 Sobic001G425500--Sobic001G481300 Sobic007G214600--Sobic003G355100 Sobic007G214600--Sobic003G197200 Sobic007G214600--Sobic004G109600 Sobic007G214600--Sobic003G148600 Sobic007G214600--Sobic001G481300 Sobic007G214600--Sobic010G198500 Sobic007G214600--Sobic001G371800 Sobic007G214600--Sobic003G394400 Sobic007G214600--Sobic004G166200
Octagon: transcription factors


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