Gene annotation
Transcriptome id Sobic.008G102900.1
Synonym Sb08g015500
Functional annotation expressed protein
UniProt C5YNW6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G232500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
2 Sobic.001G425600 "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
3 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
4 Sobic.004G004500 lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
5 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
6 Sobic.004G092800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
7 Sobic.002G284000 pyridoxal-dependent decarboxylase protein, putative, expressed K01581: E4.1.1.17, ODC1, speC, ornithine decarboxylase
8 Sobic.009G189501 - -
9 Sobic.004G086400 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
10 Sobic.001G279350 - -
11 Sobic.004G109700 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.006G207000 expressed protein -
13 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
14 Sobic.003G148300 pectinesterase, putative, expressed K01051: pectinesterase
15 Sobic.004G109600 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.001G481300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
17 Sobic.009G194400 expressed protein -
18 Sobic.007G006300 expressed protein -
19 Sobic.001G201200 - -
20 Sobic.007G147700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR33 - Auxin-responsive SAUR gene family member, expressed -


Gene co-expression network
sample Sobic008G102900 Sobic008G102900 Sobic001G232500 Sobic001G232500 Sobic008G102900--Sobic001G232500 Sobic001G425600 Sobic001G425600 Sobic008G102900--Sobic001G425600 Sobic001G425500 Sobic001G425500 Sobic008G102900--Sobic001G425500 Sobic004G004500 Sobic004G004500 Sobic008G102900--Sobic004G004500 Sobic002G339000 Sobic002G339000 Sobic008G102900--Sobic002G339000 Sobic004G092800 Sobic004G092800 Sobic008G102900--Sobic004G092800 Sobic002G284000 Sobic002G284000 Sobic008G102900--Sobic002G284000 Sobic009G189501 Sobic009G189501 Sobic008G102900--Sobic009G189501 Sobic004G086400 Sobic004G086400 Sobic008G102900--Sobic004G086400 Sobic001G232500--Sobic004G092800 Sobic001G232500--Sobic008G102900 Sobic001G232500--Sobic001G425500 Sobic001G232500--Sobic001G425600 Sobic002G369301 Sobic002G369301 Sobic001G232500--Sobic002G369301 Sobic001G187400 Sobic001G187400 Sobic001G232500--Sobic001G187400 Sobic003G370600 Sobic003G370600 Sobic001G232500--Sobic003G370600 Sobic002G388800 Sobic002G388800 Sobic001G232500--Sobic002G388800 Sobic003G112400 Sobic003G112400 Sobic001G232500--Sobic003G112400 Sobic001G425600--Sobic001G425500 Sobic004G109700 Sobic004G109700 Sobic001G425600--Sobic004G109700 Sobic004G273300 Sobic004G273300 Sobic001G425600--Sobic004G273300 Sobic009G194400 Sobic009G194400 Sobic001G425600--Sobic009G194400 Sobic004G109600 Sobic004G109600 Sobic001G425600--Sobic004G109600 Sobic001G481300 Sobic001G481300 Sobic001G425600--Sobic001G481300 Sobic010G196600 Sobic010G196600 Sobic001G425600--Sobic010G196600 Sobic001G279350 Sobic001G279350 Sobic001G425600--Sobic001G279350 Sobic003G323201 Sobic003G323201 Sobic001G425600--Sobic003G323201 Sobic001G425500--Sobic001G425600 Sobic001G425500--Sobic004G109700 Sobic001G425500--Sobic009G194400 Sobic001G425500--Sobic010G196600 Sobic001G425500--Sobic004G273300 Sobic001G425500--Sobic003G323201 Sobic001G425500--Sobic004G092800 Sobic001G425500--Sobic004G109600 Sobic001G425500--Sobic001G481300 Sobic004G004500--Sobic002G339000 Sobic001G256700 Sobic001G256700 Sobic004G004500--Sobic001G256700 Sobic007G036900 Sobic007G036900 Sobic004G004500--Sobic007G036900 Sobic003G148300 Sobic003G148300 Sobic004G004500--Sobic003G148300 Sobic004G108200 Sobic004G108200 Sobic004G004500--Sobic004G108200 Sobic001G195200 Sobic001G195200 Sobic004G004500--Sobic001G195200 Sobic004G004500--Sobic009G189501 Sobic004G294400 Sobic004G294400 Sobic004G004500--Sobic004G294400 Sobic004G229800 Sobic004G229800 Sobic004G004500--Sobic004G229800 Sobic002G339000--Sobic004G004500 Sobic002G339000--Sobic001G256700 Sobic002G339000--Sobic007G036900 Sobic002G339000--Sobic003G148300 Sobic002G339000--Sobic001G195200 Sobic004G169200 Sobic004G169200 Sobic002G339000--Sobic004G169200 Sobic002G339000--Sobic004G108200 Sobic002G395300 Sobic002G395300 Sobic002G339000--Sobic002G395300 Sobic007G214600 Sobic007G214600 Sobic002G339000--Sobic007G214600 Sobic004G092800--Sobic001G232500 Sobic001G065900 Sobic001G065900 Sobic004G092800--Sobic001G065900 Sobic004G092800--Sobic003G370600 Sobic004G092800--Sobic002G388800 Sobic004G092800--Sobic001G425500 Sobic004G263100 Sobic004G263100 Sobic004G092800--Sobic004G263100 Sobic004G092800--Sobic009G194400 Sobic004G092800--Sobic002G369301 Sobic006G170000 Sobic006G170000 Sobic004G092800--Sobic006G170000 Sobic001G201200 Sobic001G201200 Sobic002G284000--Sobic001G201200 Sobic007G147700 Sobic007G147700 Sobic002G284000--Sobic007G147700 Sobic007G006300 Sobic007G006300 Sobic002G284000--Sobic007G006300 Sobic002G284000--Sobic001G279350 Sobic001G076100 Sobic001G076100 Sobic002G284000--Sobic001G076100 Sobic002G284000--Sobic001G481300 Sobic005G086400 Sobic005G086400 Sobic002G284000--Sobic005G086400 Sobic002G284000--Sobic004G109600 Sobic001G371800 Sobic001G371800 Sobic002G284000--Sobic001G371800 Sobic009G189501--Sobic004G004500 Sobic001G391500 Sobic001G391500 Sobic009G189501--Sobic001G391500 Sobic001G459800 Sobic001G459800 Sobic009G189501--Sobic001G459800 Sobic009G189501--Sobic002G339000 Sobic009G189501--Sobic007G214600 Sobic001G397300 Sobic001G397300 Sobic009G189501--Sobic001G397300 Sobic009G189501--Sobic007G036900 Sobic004G141200 Sobic004G141200 Sobic009G189501--Sobic004G141200 Sobic003G355100 Sobic003G355100 Sobic009G189501--Sobic003G355100 Sobic004G086400--Sobic003G148300 Sobic004G086400--Sobic004G108200 Sobic004G086400--Sobic004G004500 Sobic010G212800 Sobic010G212800 Sobic004G086400--Sobic010G212800 Sobic006G207000 Sobic006G207000 Sobic004G086400--Sobic006G207000 Sobic004G086400--Sobic007G006300 Sobic002G234400 Sobic002G234400 Sobic004G086400--Sobic002G234400 Sobic004G086400--Sobic002G339000 Sobic004G086400--Sobic009G189501
Octagon: transcription factors


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