Gene annotation
| Transcriptome id | Sobic.001G187500.1 |
|---|---|
| Synonym | Sb01g016470, CYP79B3 |
| Functional annotation | cytochrome P450, putative, expressed |
| UniProt | A0A1Z5S6M9 |
| Pfam | PF00067 |
| Panther DB | PTHR24298 PTHR24298:SF143 |
| NCBI CDD | KOG0156; Cytochrome P450 CYP2 subfamily |
| KEGG Orthology | - |
| Gene Ontology | GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding |
Orthologs (automatic annotation)
| TAIR | AT2G22330 : cytochrome P450, family 79, subfamily B, polypeptide 3 |
|---|---|
| RAP-DB (Rice) | LOC_Os04g08828.1 : cytochrome P450, putative, expressed |
| MaizeGDB (Corn) | Zm00025a017327 , Zm00025a008259 , Zm00025a017386 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G187400 | cytochrome P450, putative, expressed | - |
| 2 | Sobic.002G369301 | - | - |
| 3 | Sobic.003G148300 | pectinesterase, putative, expressed | K01051: pectinesterase |
| 4 | Sobic.003G370600 | hydrolase, alpha/beta fold family domain containing protein, expressed | K07019: uncharacterized protein |
| 5 | Sobic.002G245200 | beta-expansin precursor, putative, expressed | - |
| 6 | Sobic.008G102900 | expressed protein | - |
| 7 | Sobic.004G004500 | lactate/malate dehydrogenase, putative, expressed | K00016: LDH, L-lactate dehydrogenase |
| 8 | Sobic.004G086400 | cytochrome P450 72A1, putative, expressed | K15639: CYP734A1, PHYB activation tagged suppressor 1 |
| 9 | Sobic.002G388800 | cytochrome P450 72A1, putative, expressed | - |
| 10 | Sobic.001G232500 | glycine-rich cell wall structural protein 2 precursor, putative, expressed | - |
| 11 | Sobic.006G170000 | Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed | - |
| 12 | Sobic.004G352000 | cytochrome P450, putative, expressed | - |
| 13 | Sobic.002G339000 | OsFBX257 - F-box domain containing protein, expressed | - |
| 14 | Sobic.004G108200 | cytochrome P450 93A2, putative, expressed | - |
| 15 | Sobic.001G425600 | "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed | K13993: HSP20 family protein |
| 16 | Sobic.001G425500 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed | K13993: HSP20 family protein |
| 17 | Sobic.006G207000 | expressed protein | - |
| 18 | Sobic.007G006300 | expressed protein | - |
| 19 | Sobic.004G092800 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed | K13993: HSP20 family protein |
| 20 | Sobic.010G238900 | oryzain beta chain precursor, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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