Gene annotation
Transcriptome id Sobic.002G245200.1
Synonym Sb02g028190
Functional annotation beta-expansin precursor, putative, expressed
UniProt A0A1B6QDA0
Pfam PF03330
Panther DB PTHR22595 PTHR22595:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G30380 : Barwin-related endoglucanase
RAP-DB (Rice) LOC_Os09g29690.1 : beta-expansin precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G187500 cytochrome P450, putative, expressed -
2 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
3 Sobic.001G425600 "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
4 Sobic.001G279350 - -
5 Sobic.002G369301 - -
6 Sobic.006G207000 expressed protein -
7 Sobic.004G251800 leaf senescence related protein, putative, expressed -
8 Sobic.004G109700 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.004G086400 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
10 Sobic.001G187400 cytochrome P450, putative, expressed -
11 Sobic.003G370600 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
12 Sobic.009G194400 expressed protein -
13 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G085750 - -
15 Sobic.003G148300 pectinesterase, putative, expressed K01051: pectinesterase
16 Sobic.005G013400 WRKY52, expressed -
17 Sobic.001G232500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
18 Sobic.004G092800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
19 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
20 Sobic.004G273300 ubiquitin family protein, putative, expressed K08770: ubiquitin C


Gene co-expression network
sample Sobic002G245200 Sobic002G245200 Sobic001G187500 Sobic001G187500 Sobic002G245200--Sobic001G187500 Sobic001G425500 Sobic001G425500 Sobic002G245200--Sobic001G425500 Sobic001G425600 Sobic001G425600 Sobic002G245200--Sobic001G425600 Sobic001G279350 Sobic001G279350 Sobic002G245200--Sobic001G279350 Sobic002G369301 Sobic002G369301 Sobic002G245200--Sobic002G369301 Sobic006G207000 Sobic006G207000 Sobic002G245200--Sobic006G207000 Sobic004G251800 Sobic004G251800 Sobic002G245200--Sobic004G251800 Sobic004G109700 Sobic004G109700 Sobic002G245200--Sobic004G109700 Sobic004G086400 Sobic004G086400 Sobic002G245200--Sobic004G086400 Sobic001G187400 Sobic001G187400 Sobic001G187500--Sobic001G187400 Sobic001G187500--Sobic002G369301 Sobic003G148300 Sobic003G148300 Sobic001G187500--Sobic003G148300 Sobic003G370600 Sobic003G370600 Sobic001G187500--Sobic003G370600 Sobic001G187500--Sobic002G245200 Sobic008G102900 Sobic008G102900 Sobic001G187500--Sobic008G102900 Sobic004G004500 Sobic004G004500 Sobic001G187500--Sobic004G004500 Sobic001G187500--Sobic004G086400 Sobic002G388800 Sobic002G388800 Sobic001G187500--Sobic002G388800 Sobic001G425500--Sobic001G425600 Sobic001G425500--Sobic004G109700 Sobic009G194400 Sobic009G194400 Sobic001G425500--Sobic009G194400 Sobic010G196600 Sobic010G196600 Sobic001G425500--Sobic010G196600 Sobic004G273300 Sobic004G273300 Sobic001G425500--Sobic004G273300 Sobic003G323201 Sobic003G323201 Sobic001G425500--Sobic003G323201 Sobic004G092800 Sobic004G092800 Sobic001G425500--Sobic004G092800 Sobic004G109600 Sobic004G109600 Sobic001G425500--Sobic004G109600 Sobic001G481300 Sobic001G481300 Sobic001G425500--Sobic001G481300 Sobic001G425600--Sobic001G425500 Sobic001G425600--Sobic004G109700 Sobic001G425600--Sobic004G273300 Sobic001G425600--Sobic009G194400 Sobic001G425600--Sobic004G109600 Sobic001G425600--Sobic001G481300 Sobic001G425600--Sobic010G196600 Sobic001G425600--Sobic001G279350 Sobic001G425600--Sobic003G323201 Sobic001G279350--Sobic001G481300 Sobic001G279350--Sobic004G109600 Sobic007G147700 Sobic007G147700 Sobic001G279350--Sobic007G147700 Sobic003G355100 Sobic003G355100 Sobic001G279350--Sobic003G355100 Sobic001G279350--Sobic001G425600 Sobic001G279350--Sobic004G109700 Sobic003G197200 Sobic003G197200 Sobic001G279350--Sobic003G197200 Sobic001G279350--Sobic001G425500 Sobic007G214600 Sobic007G214600 Sobic001G279350--Sobic007G214600 Sobic002G369301--Sobic001G187400 Sobic002G369301--Sobic004G092800 Sobic002G369301--Sobic003G370600 Sobic006G170000 Sobic006G170000 Sobic002G369301--Sobic006G170000 Sobic001G232500 Sobic001G232500 Sobic002G369301--Sobic001G232500 Sobic001G279701 Sobic001G279701 Sobic002G369301--Sobic001G279701 Sobic002G369301--Sobic001G187500 Sobic002G369301--Sobic001G425500 Sobic004G352000 Sobic004G352000 Sobic002G369301--Sobic004G352000 Sobic003G116800 Sobic003G116800 Sobic006G207000--Sobic003G116800 Sobic006G207000--Sobic004G086400 Sobic006G207100 Sobic006G207100 Sobic006G207000--Sobic006G207100 Sobic006G207000--Sobic010G196600 Sobic002G339000 Sobic002G339000 Sobic006G207000--Sobic002G339000 Sobic006G207000--Sobic003G148300 Sobic006G207000--Sobic001G425500 Sobic007G155200 Sobic007G155200 Sobic006G207000--Sobic007G155200 Sobic006G207000--Sobic004G004500 Sobic001G065900 Sobic001G065900 Sobic004G251800--Sobic001G065900 Sobic004G263100 Sobic004G263100 Sobic004G251800--Sobic004G263100 Sobic004G251800--Sobic002G388800 Sobic003G060100 Sobic003G060100 Sobic004G251800--Sobic003G060100 Sobic004G094900 Sobic004G094900 Sobic004G251800--Sobic004G094900 Sobic002G100832 Sobic002G100832 Sobic004G251800--Sobic002G100832 Sobic004G251800--Sobic004G092800 Sobic002G390000 Sobic002G390000 Sobic004G251800--Sobic002G390000 Sobic006G057500 Sobic006G057500 Sobic004G251800--Sobic006G057500 Sobic004G109700--Sobic004G109600 Sobic004G109700--Sobic001G425600 Sobic004G109700--Sobic001G425500 Sobic004G109700--Sobic001G481300 Sobic004G109700--Sobic010G196600 Sobic004G109700--Sobic009G194400 Sobic004G109700--Sobic003G323201 Sobic004G109700--Sobic007G214600 Sobic004G109700--Sobic001G279350 Sobic004G086400--Sobic003G148300 Sobic004G108200 Sobic004G108200 Sobic004G086400--Sobic004G108200 Sobic004G086400--Sobic004G004500 Sobic010G212800 Sobic010G212800 Sobic004G086400--Sobic010G212800 Sobic004G086400--Sobic006G207000 Sobic007G006300 Sobic007G006300 Sobic004G086400--Sobic007G006300 Sobic002G234400 Sobic002G234400 Sobic004G086400--Sobic002G234400 Sobic004G086400--Sobic002G339000 Sobic009G189501 Sobic009G189501 Sobic004G086400--Sobic009G189501
Octagon: transcription factors


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