Gene annotation
Transcriptome id Sobic.003G085750.1
Synonym -
Functional annotation -
UniProt A0A1W0VW84
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G279350 - -
2 Sobic.001G481300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
3 Sobic.003G355100 expressed protein -
4 Sobic.007G214600 EF hand family protein, putative, expressed -
5 Sobic.007G214400 EF hand family protein, putative, expressed -
6 Sobic.001G371800 expressed protein -
7 Sobic.004G109600 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.003G394400 ubiquitin family protein, putative, expressed -
9 Sobic.009G169000 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01568: PDC, pyruvate decarboxylase
10 Sobic.003G197200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
11 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
12 Sobic.002G389000 cytochrome P450 72A1, putative, expressed -
13 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
15 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
16 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
17 Sobic.001G320900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
18 Sobic.004G280200 tobamovirus multiplication protein, putative, expressed -
19 Sobic.004G304625 - K15095: (+)-neomenthol dehydrogenase
20 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase


Gene co-expression network
sample Sobic003G085750 Sobic003G085750 Sobic001G279350 Sobic001G279350 Sobic003G085750--Sobic001G279350 Sobic001G481300 Sobic001G481300 Sobic003G085750--Sobic001G481300 Sobic003G355100 Sobic003G355100 Sobic003G085750--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic003G085750--Sobic007G214600 Sobic007G214400 Sobic007G214400 Sobic003G085750--Sobic007G214400 Sobic001G371800 Sobic001G371800 Sobic003G085750--Sobic001G371800 Sobic004G109600 Sobic004G109600 Sobic003G085750--Sobic004G109600 Sobic003G394400 Sobic003G394400 Sobic003G085750--Sobic003G394400 Sobic009G169000 Sobic009G169000 Sobic003G085750--Sobic009G169000 Sobic001G279350--Sobic001G481300 Sobic001G279350--Sobic004G109600 Sobic007G147700 Sobic007G147700 Sobic001G279350--Sobic007G147700 Sobic001G279350--Sobic003G355100 Sobic001G425600 Sobic001G425600 Sobic001G279350--Sobic001G425600 Sobic004G109700 Sobic004G109700 Sobic001G279350--Sobic004G109700 Sobic003G197200 Sobic003G197200 Sobic001G279350--Sobic003G197200 Sobic001G425500 Sobic001G425500 Sobic001G279350--Sobic001G425500 Sobic001G279350--Sobic007G214600 Sobic001G481300--Sobic003G355100 Sobic001G481300--Sobic004G109600 Sobic001G481300--Sobic003G197200 Sobic001G481300--Sobic007G214600 Sobic001G481300--Sobic001G279350 Sobic001G481300--Sobic004G109700 Sobic003G148600 Sobic003G148600 Sobic001G481300--Sobic003G148600 Sobic001G481300--Sobic001G371800 Sobic010G198500 Sobic010G198500 Sobic001G481300--Sobic010G198500 Sobic003G355100--Sobic007G214600 Sobic003G355100--Sobic003G197200 Sobic003G355100--Sobic001G481300 Sobic003G355100--Sobic003G148600 Sobic003G355100--Sobic004G109600 Sobic003G355100--Sobic003G394400 Sobic001G108200 Sobic001G108200 Sobic003G355100--Sobic001G108200 Sobic003G144700 Sobic003G144700 Sobic003G355100--Sobic003G144700 Sobic004G166200 Sobic004G166200 Sobic003G355100--Sobic004G166200 Sobic007G214600--Sobic003G355100 Sobic007G214600--Sobic003G197200 Sobic007G214600--Sobic004G109600 Sobic007G214600--Sobic003G148600 Sobic007G214600--Sobic001G481300 Sobic007G214600--Sobic010G198500 Sobic007G214600--Sobic001G371800 Sobic007G214600--Sobic003G394400 Sobic007G214600--Sobic004G166200 Sobic007G214400--Sobic003G394400 Sobic007G214400--Sobic001G371800 Sobic002G389000 Sobic002G389000 Sobic007G214400--Sobic002G389000 Sobic001G107800 Sobic001G107800 Sobic007G214400--Sobic001G107800 Sobic002G068600 Sobic002G068600 Sobic007G214400--Sobic002G068600 Sobic001G254100 Sobic001G254100 Sobic007G214400--Sobic001G254100 Sobic002G261200 Sobic002G261200 Sobic007G214400--Sobic002G261200 Sobic003G086600 Sobic003G086600 Sobic007G214400--Sobic003G086600 Sobic007G214400--Sobic007G214600 Sobic001G371800--Sobic007G214400 Sobic001G371800--Sobic003G394400 Sobic001G201200 Sobic001G201200 Sobic001G371800--Sobic001G201200 Sobic001G371800--Sobic002G389000 Sobic001G371800--Sobic004G166200 Sobic001G371800--Sobic001G107800 Sobic001G371800--Sobic007G214600 Sobic001G371800--Sobic003G197200 Sobic001G371800--Sobic003G148600 Sobic004G109600--Sobic001G481300 Sobic004G109600--Sobic003G355100 Sobic004G109600--Sobic007G214600 Sobic004G109600--Sobic004G109700 Sobic004G109600--Sobic003G197200 Sobic004G109600--Sobic010G198500 Sobic004G109600--Sobic003G148600 Sobic004G109600--Sobic001G371800 Sobic004G109600--Sobic001G201200 Sobic003G394400--Sobic002G068600 Sobic003G394400--Sobic007G214400 Sobic003G394400--Sobic003G086600 Sobic003G394400--Sobic001G371800 Sobic003G394400--Sobic004G166200 Sobic003G394400--Sobic001G107800 Sobic003G394400--Sobic003G355100 Sobic003G394400--Sobic003G148600 Sobic003G394400--Sobic007G214600 Sobic001G320900 Sobic001G320900 Sobic009G169000--Sobic001G320900 Sobic009G169000--Sobic003G144700 Sobic004G280200 Sobic004G280200 Sobic009G169000--Sobic004G280200 Sobic009G169000--Sobic003G197200 Sobic009G169000--Sobic003G355100 Sobic009G169000--Sobic007G214600 Sobic009G169000--Sobic003G148600 Sobic009G169000--Sobic001G107800 Sobic007G026600 Sobic007G026600 Sobic009G169000--Sobic007G026600
Octagon: transcription factors


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