Gene annotation
Transcriptome id Sobic.010G238900.1
Synonym Sb10g027980
Functional annotation oryzain beta chain precursor, putative, expressed
UniProt A0A194YL29
Pfam PF08246 PF00112
Panther DB PTHR12411 PTHR12411:SF344
NCBI CDD KOG1543; Cysteine proteinase Cathepsin L
KEGG Orthology -
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT5G43060 : Granulin repeat cysteine protease family protein
RAP-DB (Rice) LOC_Os04g57440.1 : oryzain beta chain precursor, putative, expressed
MaizeGDB (Corn) Zm00025a015320 , Zm00025a041837 , Zm00025a041836
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G116800 cinnamoyl CoA reductase, putative, expressed K09753: cinnamoyl-CoA reductase
2 Sobic.008G070350 - K01945: phosphoribosylamine---glycine ligase
3 Sobic.004G071650 - -
4 Sobic.004G166700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Beta-fructofuranosidase, cell wall Invertase 2 (Os)"(PubMedID : 27208977)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
5 Sobic.006G207000 expressed protein -
6 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
7 Sobic.001G025101 - -
8 Sobic.010G044400 Up-reguralion under heat(PubMedID : 24916767)@GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
10 Sobic.010G149700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.003G227300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY11, expressed -
12 Sobic.005G063100 expressed protein -
13 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
14 Sobic.003G148300 pectinesterase, putative, expressed K01051: pectinesterase
15 Sobic.002G423300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.010G176600 - -
17 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
18 Sobic.005G045900 - -
19 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
20 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -


Gene co-expression network
sample Sobic010G238900 Sobic010G238900 Sobic003G116800 Sobic003G116800 Sobic010G238900--Sobic003G116800 Sobic008G070350 Sobic008G070350 Sobic010G238900--Sobic008G070350 Sobic004G071650 Sobic004G071650 Sobic010G238900--Sobic004G071650 Sobic004G166700 Sobic004G166700 Sobic010G238900--Sobic004G166700 Sobic006G207000 Sobic006G207000 Sobic010G238900--Sobic006G207000 Sobic005G051200 Sobic005G051200 Sobic010G238900--Sobic005G051200 Sobic001G025101 Sobic001G025101 Sobic010G238900--Sobic001G025101 Sobic010G044400 Sobic010G044400 Sobic010G238900--Sobic010G044400 Sobic005G099000 Sobic005G099000 Sobic010G238900--Sobic005G099000 Sobic003G116800--Sobic005G099000 Sobic005G063100 Sobic005G063100 Sobic003G116800--Sobic005G063100 Sobic003G286600 Sobic003G286600 Sobic003G116800--Sobic003G286600 Sobic001G108200 Sobic001G108200 Sobic003G116800--Sobic001G108200 Sobic001G435000 Sobic001G435000 Sobic003G116800--Sobic001G435000 Sobic010G176600 Sobic010G176600 Sobic003G116800--Sobic010G176600 Sobic004G301000 Sobic004G301000 Sobic003G116800--Sobic004G301000 Sobic004G229800 Sobic004G229800 Sobic003G116800--Sobic004G229800 Sobic003G345100 Sobic003G345100 Sobic003G116800--Sobic003G345100 Sobic001G397200 Sobic001G397200 Sobic008G070350--Sobic001G397200 Sobic009G035200 Sobic009G035200 Sobic008G070350--Sobic009G035200 Sobic008G070350--Sobic005G051200 Sobic005G103500 Sobic005G103500 Sobic008G070350--Sobic005G103500 Sobic001G309600 Sobic001G309600 Sobic008G070350--Sobic001G309600 Sobic006G032700 Sobic006G032700 Sobic008G070350--Sobic006G032700 Sobic007G026600 Sobic007G026600 Sobic008G070350--Sobic007G026600 Sobic004G280200 Sobic004G280200 Sobic008G070350--Sobic004G280200 Sobic003G086600 Sobic003G086600 Sobic008G070350--Sobic003G086600 Sobic010G084100 Sobic010G084100 Sobic004G071650--Sobic010G084100 Sobic010G084700 Sobic010G084700 Sobic004G071650--Sobic010G084700 Sobic004G071650--Sobic003G116800 Sobic005G045900 Sobic005G045900 Sobic004G071650--Sobic005G045900 Sobic004G071650--Sobic003G286600 Sobic001G348700 Sobic001G348700 Sobic004G071650--Sobic001G348700 Sobic004G221500 Sobic004G221500 Sobic004G071650--Sobic004G221500 Sobic005G206601 Sobic005G206601 Sobic004G071650--Sobic005G206601 Sobic001G487300 Sobic001G487300 Sobic004G071650--Sobic001G487300 Sobic001G252300 Sobic001G252300 Sobic004G166700--Sobic001G252300 Sobic009G229000 Sobic009G229000 Sobic004G166700--Sobic009G229000 Sobic002G416600 Sobic002G416600 Sobic004G166700--Sobic002G416600 Sobic009G234100 Sobic009G234100 Sobic004G166700--Sobic009G234100 Sobic004G166700--Sobic005G051200 Sobic004G208700 Sobic004G208700 Sobic004G166700--Sobic004G208700 Sobic006G092500 Sobic006G092500 Sobic004G166700--Sobic006G092500 Sobic004G166700--Sobic003G345100 Sobic004G166700--Sobic005G063100 Sobic006G207000--Sobic003G116800 Sobic004G086400 Sobic004G086400 Sobic006G207000--Sobic004G086400 Sobic006G207100 Sobic006G207100 Sobic006G207000--Sobic006G207100 Sobic010G196600 Sobic010G196600 Sobic006G207000--Sobic010G196600 Sobic002G339000 Sobic002G339000 Sobic006G207000--Sobic002G339000 Sobic003G148300 Sobic003G148300 Sobic006G207000--Sobic003G148300 Sobic001G425500 Sobic001G425500 Sobic006G207000--Sobic001G425500 Sobic007G155200 Sobic007G155200 Sobic006G207000--Sobic007G155200 Sobic004G004500 Sobic004G004500 Sobic006G207000--Sobic004G004500 Sobic001G317200 Sobic001G317200 Sobic005G051200--Sobic001G317200 Sobic005G051200--Sobic009G035200 Sobic008G050600 Sobic008G050600 Sobic005G051200--Sobic008G050600 Sobic005G051200--Sobic002G416600 Sobic009G164600 Sobic009G164600 Sobic005G051200--Sobic009G164600 Sobic005G051200--Sobic003G345100 Sobic005G051200--Sobic003G286600 Sobic005G051200--Sobic005G063100 Sobic005G051200--Sobic001G252300 Sobic001G025300 Sobic001G025300 Sobic001G025101--Sobic001G025300 Sobic001G025101--Sobic002G416600 Sobic003G088500 Sobic003G088500 Sobic001G025101--Sobic003G088500 Sobic001G025101--Sobic005G051200 Sobic003G087300 Sobic003G087300 Sobic001G025101--Sobic003G087300 Sobic001G025101--Sobic004G166700 Sobic004G245500 Sobic004G245500 Sobic001G025101--Sobic004G245500 Sobic001G025101--Sobic010G044400 Sobic001G025101--Sobic003G345100 Sobic003G317100 Sobic003G317100 Sobic010G044400--Sobic003G317100 Sobic010G044400--Sobic005G045900 Sobic010G044400--Sobic003G286600 Sobic010G044400--Sobic001G025101 Sobic010G044400--Sobic003G116800 Sobic010G044400--Sobic003G088500 Sobic010G044400--Sobic009G164600 Sobic010G044400--Sobic001G025300 Sobic010G044400--Sobic005G051200 Sobic005G099000--Sobic005G063100 Sobic005G099000--Sobic003G345100 Sobic005G099000--Sobic003G116800 Sobic004G141200 Sobic004G141200 Sobic005G099000--Sobic004G141200 Sobic001G169500 Sobic001G169500 Sobic005G099000--Sobic001G169500 Sobic005G099000--Sobic001G435000 Sobic005G099000--Sobic004G208700 Sobic005G011300 Sobic005G011300 Sobic005G099000--Sobic005G011300 Sobic005G099000--Sobic001G108200
Octagon: transcription factors


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